RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 IGKV3OR2-268A0A0C4DH90 116 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 OR11H12B2RN74 326 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 TMEM250H0YL14 139 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 MOSP00540 346 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 RPL8P62917 257 aaKnown RBP6.52□□□□□ -1.37
CTNND1-223ENST00000529986 TCF24Q7RTU0 167 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 OR11H1Q8NG94 326 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 OR11H2Q8NH07 326 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 CLDND2Q8NHS1 167 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 MBD3L1Q8WWY6 194 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 RAB1CQ92928 201 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 PLXNA1Q9UIW2 1896 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 LOC285556D6RIA3 1793 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 TMEM14DPA8MWL7 114 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 UBE2CO00762 179 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 NXPH1P58417 271 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 SMAGPQ0VAQ4 97 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 TRA2AQ13595 282 aaKnown RBP eCLIP6.52□□□□□ -1.37
CTNND1-223ENST00000529986 FAM74A4Q5TZK3 123 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 NUP37Q8NFH4 326 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 PHLDA3Q9Y5J5 127 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 MDC1Q14676 2089 aaKnown RBP6.52□□□□□ -1.37
CTNND1-223ENST00000529986 CACNA1DQ01668 2161 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 LINC00614P0C842 121 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 LOXL3P58215 753 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 NR2C2APQ86WQ0 139 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 TTC9CQ8N5M4 171 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 NAA38Q9BRA0 125 aaKnown RBP6.52□□□□□ -1.37
CTNND1-223ENST00000529986 PRDM13Q9H4Q3 707 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 TCFL5Q9UL49 500 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 MPV17P39210 176 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 MEIG1Q5JSS6 88 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 TMEM170BQ5T4T1 132 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 FBXW9Q5XUX1 488 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 CYP2G1PQ6ZSU1 146 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 NPIPB3Q92617 1050 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 NPCDR1Q9BY65 106 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 TCF19Q9Y242 345 aa6.52□□□□□ -1.37
CTNND1-223ENST00000529986 VENTXO95231 258 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 STAG3L3P0CL85 134 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 HSPE1P61604 102 aaKnown RBP6.51□□□□□ -1.37
CTNND1-223ENST00000529986 SELENOTP62341 195 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 ASPHD2Q6ICH7 369 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 SLC25A47Q6Q0C1 308 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 MARS2Q96GW9 593 aaKnown RBP6.51□□□□□ -1.37
CTNND1-223ENST00000529986 RTBDNQ9BSG5 229 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-223ENST00000529986 SSBP4Q9BWG4 385 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-223ENST00000529986 TRPM6Q9BX84 2022 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 IGKV1D-42A0A075B6H8 117 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 C5orf67F2Z3F1 127 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 IL6RP08887 468 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-223ENST00000529986 CTSSP25774 331 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 RPL23P62829 140 aaKnown RBP6.51□□□□□ -1.37
CTNND1-223ENST00000529986 MESP2Q0VG99 397 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 DRAM1Q8N682 238 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 OR51G1Q8NGK1 321 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 IGHV3OR16-12A0A075B7B8 117 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 C1QTNF9P0C862 333 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 ZNF324BQ6AW86 544 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-223ENST00000529986 HIST1H2BLQ99880 126 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 RAB1BQ9H0U4 201 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 PLSCR2Q9NRY7 297 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 C1RLQ9NZP8 487 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 RALGAPA2Q2PPJ7 1873 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 TRIP12Q14669 1992 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-223ENST00000529986 FAM90A26D6RGX4 464 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 MGST3O14880 152 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 THY1P04216 161 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 GPR183P32249 361 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 OR10J6PQ8NGY7 276 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 PRELID3AQ96N28 172 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 GPR82Q96P67 336 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 RNF126Q9BV68 326 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 IGHV3OR16-13A0A075B7E8 117 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 A0A087WWC5 75 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 IGHV3-74A0A0B4J1X5 117 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 PGPEP1LA6NFU8 196 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 PROB1E7EW31 1015 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 CD3EP07766 207 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 CTSBP07858 339 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 CEACAM1P13688 526 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 ICAM4Q14773 271 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 ZXDCQ2QGD7 858 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-223ENST00000529986 PRR31Q5SQ13 230 aa6.51□□□□□ -1.37
CTNND1-223ENST00000529986 PSMG3Q9BT73 122 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-223ENST00000529986 NHP2Q9NX24 153 aaKnown RBP6.51□□□□□ -1.37
CTNND1-223ENST00000529986 NDUFA3O95167 84 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 UCP2P55851 309 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 CCL20P78556 96 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 DEFB124Q8NES8 71 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 RNASE7Q9H1E1 156 aaKnown RBP6.5□□□□□ -1.37
CTNND1-223ENST00000529986 ZNF646O15015 1829 aaPredicted RBP6.5□□□□□ -1.37
CTNND1-223ENST00000529986 A0A087WV48 116 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 TRAV8-2A0A0B4J237 113 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 LOC390937A0A1W2PQ73 354 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 C19orf67A6NJJ6 358 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 PPP1R17O96001 155 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 ADRA2AP08913 450 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 LINC00305Q7Z4B0 112 aa6.5□□□□□ -1.37
CTNND1-223ENST00000529986 OR13C6PQ8NH95 151 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms