RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 TSEN15Q8WW01 171 aaKnown RBP3.88□□□□□ -1.79
AMBRA1-209ENST00000529963 TRUB1Q8WWH5 349 aaKnown RBP3.88□□□□□ -1.79
AMBRA1-209ENST00000529963 PELI1Q96FA3 418 aa3.88□□□□□ -1.79
AMBRA1-209ENST00000529963 C4orf36Q96KX1 117 aa3.88□□□□□ -1.79
AMBRA1-209ENST00000529963 GPER1Q99527 375 aa3.88□□□□□ -1.79
AMBRA1-209ENST00000529963 GABARAPL3Q9BY60 117 aa3.88□□□□□ -1.79
AMBRA1-209ENST00000529963 ZNF256Q9Y2P7 627 aaPredicted RBP3.88□□□□□ -1.79
AMBRA1-209ENST00000529963 AP4S1Q9Y587 144 aa3.88□□□□□ -1.79
AMBRA1-209ENST00000529963 SMAD5-AS1Q9Y6J3 95 aa3.88□□□□□ -1.79
AMBRA1-209ENST00000529963 PCLOQ9Y6V0 5065 aa3.88□□□□□ -1.79
AMBRA1-209ENST00000529963 IGHV3-72A0A0B4J1Y9 119 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 A0A1W2PPE3 182 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 TMEM30CPA0ZSE6 113 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 TMEM212A6NML5 194 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 ANKRD65E5RJM6 399 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 H3BTX0 84 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 TSC22D2O75157 780 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 IGHG4P01861 327 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 FCER2P06734 321 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 OR8U8P0C7N1 319 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 OR5H8P0DN80 308 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 GZMHP20718 246 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 POLR2IP36954 125 aaKnown RBP3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 MRPL28Q13084 256 aaKnown RBP3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 P2RY14Q15391 338 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 TATDN3Q17R31 274 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 PIGYQ3MUY2 71 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 MEDAGQ5VYS4 303 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 LPCAT4Q643R3 524 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 SYS1Q8N2H4 156 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 LINC00311Q8N616 119 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 Q8N6K4 173 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 C8orf31Q8N9H6 132 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 SUMF2Q8NBJ7 301 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 PLPPR1Q8TBJ4 325 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 RTN4IP1Q8WWV3 396 aaPredicted RBP3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 ARL11Q969Q4 196 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 OPRPNQ99935 248 aaPredicted RBP3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 FAM192AQ9GZU8 254 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 ORC6Q9Y5N6 252 aa3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 HUWE1Q7Z6Z7 4374 aaKnown RBP3.87□□□□□ -1.79
AMBRA1-209ENST00000529963 TRAV39A0A0B4J263 110 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 J3QRE1 110 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 SDCBPO00560 298 aaPredicted RBP3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 GABRPO00591 440 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 ORC5O43913 435 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 OR7C1O76099 320 aaPredicted RBP3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 IGF1P05019 195 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 CD2P06729 351 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 PSMB8P28062 276 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 RBM11P57052 281 aaKnown RBP3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 SNRPGP62308 76 aaKnown RBP3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 PPP3R1P63098 170 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 Q3ZCU0 254 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 NHLRC3Q5JS37 347 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 SLC25A30Q5SVS4 291 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 FAM27D1Q5T7N8 215 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 C1orf146Q5VVC0 180 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 LINC00596Q86U02 117 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 ZNF429Q86V71 674 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 LINC00518Q8N0U6 118 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 STX19Q8N4C7 294 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 GVQW1Q8N7I0 195 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 TMEM104Q8NE00 496 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 OR11H1Q8NG94 326 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 OR10K1Q8NGX5 313 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 OR5AK2Q8NH90 309 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 NEK7Q8TDX7 302 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 CENPNQ96H22 339 aaPredicted RBP3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 LINC00479Q96M42 142 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 KCTD7Q96MP8 289 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 RCHY1Q96PM5 261 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 S100A13Q99584 98 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 METTL9Q9H1A3 318 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 PAK1IP1Q9NWT1 392 aaPredicted RBP3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 ZNF107Q9UII5 783 aaPredicted RBP3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 ING4Q9UNL4 249 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 ST3GAL6Q9Y274 331 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 SORL1Q92673 2214 aa3.86□□□□□ -1.79
AMBRA1-209ENST00000529963 IGLV7-46A0A075B6I9 117 aa3.85□□□□□ -1.79
AMBRA1-209ENST00000529963 IGHV3-43A0A0B4J1X8 118 aa3.85□□□□□ -1.79
AMBRA1-209ENST00000529963 C15orf65H3BRN8 121 aa3.85□□□□□ -1.79
AMBRA1-209ENST00000529963 AIPO00170 330 aa3.85□□□□□ -1.79
AMBRA1-209ENST00000529963 ZNF780AO75290 641 aaPredicted RBP3.85□□□□□ -1.79
AMBRA1-209ENST00000529963 FADS2O95864 444 aaKnown RBP3.85□□□□□ -1.79
AMBRA1-209ENST00000529963 IGHV3-43DP0DP04 118 aa3.85□□□□□ -1.79
AMBRA1-209ENST00000529963 GPR183P32249 361 aa3.85□□□□□ -1.79
AMBRA1-209ENST00000529963 ZNF137PP52743 207 aa3.85□□□□□ -1.79
AMBRA1-209ENST00000529963 RUNX1Q01196 453 aa3.85□□□□□ -1.79
AMBRA1-209ENST00000529963 ZNF616Q08AN1 781 aa3.85□□□□□ -1.79
AMBRA1-209ENST00000529963 EXOSC2Q13868 293 aaKnown RBP3.85□□□□□ -1.79
AMBRA1-209ENST00000529963 MMDQ15546 238 aa3.85□□□□□ -1.79
AMBRA1-209ENST00000529963 HAGHQ16775 308 aa3.85□□□□□ -1.79
AMBRA1-209ENST00000529963 MPV17LQ2QL34 196 aa3.85□□□□□ -1.79
AMBRA1-209ENST00000529963 ATAD3CQ5T2N8 411 aa3.85□□□□□ -1.79
AMBRA1-209ENST00000529963 C6orf183Q5T699 404 aa3.85□□□□□ -1.79
AMBRA1-209ENST00000529963 ASCL4Q6XD76 172 aa3.85□□□□□ -1.79
AMBRA1-209ENST00000529963 SLC25A48Q6ZT89 311 aaKnown RBP3.85□□□□□ -1.79
AMBRA1-209ENST00000529963 LHFPL3Q86UP9 236 aa3.85□□□□□ -1.79
AMBRA1-209ENST00000529963 FAM71E2Q8N5Q1 922 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms