RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 BDKRB2P30411 391 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 LGALS7P47929 136 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 CDC34P49427 236 aaPredicted RBP2.63□□□□□ -1.99
PTPRC-213ENST00000529828 NANOS2P60321 138 aaKnown RBP2.63□□□□□ -1.99
PTPRC-213ENST00000529828 GAMTQ14353 236 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 TRIM16LQ309B1 348 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 C6orf141Q5SZD1 244 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 LGALS9CQ6DKI2 356 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 AWAT2Q6E213 333 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 GLIPR1L1Q6UWM5 242 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 SLC16A13Q7RTY0 426 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 SMIM15Q7Z3B0 74 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 TMEM61Q8N0U2 210 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 GAPTQ8N292 157 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 JAGN1Q8N5M9 183 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 OR52B4Q8NGK2 314 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 OR2K2Q8NGT1 345 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 GLMPQ8WWB7 406 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 GHSRQ92847 366 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 MARC2Q969Z3 335 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 ZNF479Q96JC4 524 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 YPEL2Q96QA6 119 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 PHB2Q99623 299 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 GABARAPL1Q9H0R8 117 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 Q9H521 79 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 PLGRKTQ9HBL7 147 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 AMBNQ9NP70 447 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 MBNL3Q9NUK0 354 aaKnown RBP2.63□□□□□ -1.99
PTPRC-213ENST00000529828 IMPAD1Q9NX62 359 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 OR1A1Q9P1Q5 309 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 FBXL17Q9UF56 701 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 UBQLN2Q9UHD9 624 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 RPH3ALQ9UNE2 315 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 S4R3C0 116 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 TRAV8-7A0A075B6U6 113 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 A0A0A6YYH2 397 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 MSGN1A6NI15 193 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 A6NJ64 397 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 LINC00587B1AMM8 73 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 H3BUA1 57 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 RAB29O14966 203 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 SPRY2O43597 315 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 SC5DO75845 299 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 CD2P06729 351 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 STAG3L2P0CL84 134 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 MGMTP16455 207 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 AADACP22760 399 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 RHOGP84095 191 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 FLI1Q01543 452 aaPredicted RBP2.62□□□□□ -1.99
PTPRC-213ENST00000529828 ZNF45Q02386 682 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 HMGN3Q15651 99 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 ATP6AP1Q15904 470 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 ZIK1Q3SY52 487 aaPredicted RBP2.62□□□□□ -1.99
PTPRC-213ENST00000529828 PXDC1Q5TGL8 231 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 BTNL8Q6UX41 500 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 LAX1Q8IWV1 398 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 ZNF383Q8NA42 475 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 OR5AN1Q8NGI8 311 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 KCNG3Q8TAE7 436 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 LRRC20Q8TCA0 184 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 GPR148Q8TDV2 347 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 FBLIM1Q8WUP2 373 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 SNAPC3Q92966 411 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 BORCS5Q969J3 196 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 GALMQ96C23 342 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 TSNAXQ99598 290 aaKnown RBP2.62□□□□□ -1.99
PTPRC-213ENST00000529828 SULT4A1Q9BR01 284 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 GABARAPL3Q9BY60 117 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 MFFQ9GZY8 342 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 KCNK15Q9H427 330 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 CHMP1AQ9HD42 196 aaPredicted RBP2.62□□□□□ -1.99
PTPRC-213ENST00000529828 TMEM138Q9NPI0 162 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 AKIP1Q9NQ31 210 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 PAK1IP1Q9NWT1 392 aaPredicted RBP2.62□□□□□ -1.99
PTPRC-213ENST00000529828 PIPOXQ9P0Z9 390 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 MLXQ9UH92 298 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 STEAP1Q9UHE8 339 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 ZNF230Q9UIE0 474 aaPredicted RBP2.62□□□□□ -1.99
PTPRC-213ENST00000529828 POMPQ9Y244 141 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 UBR4Q5T4S7 5183 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 MUC4Q99102 2169 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 MARCH11A6NNE9 402 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 ZNF701M0R085 212 aaPredicted RBP2.62□□□□□ -1.99
PTPRC-213ENST00000529828 M0R1X1 148 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 DEFB4AO15263 64 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 MPPED1O15442 326 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 ZNF780AO75290 641 aaPredicted RBP2.62□□□□□ -1.99
PTPRC-213ENST00000529828 PDCD6O75340 191 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 PROP1O75360 226 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 OR2J3O76001 311 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 NDUFB8O95169 186 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 OR2C1O95371 312 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 IGLV2-23P01705 113 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 FCER2P06734 321 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 CTXN2P0C2S0 81 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 RPL35AP18077 110 aaKnown RBP2.62□□□□□ -1.99
PTPRC-213ENST00000529828 FUT3P21217 361 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 FCGR2BP31994 310 aaPredicted RBP2.62□□□□□ -1.99
PTPRC-213ENST00000529828 MC5RP33032 325 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 KIR2DS2P43631 304 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms