RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 TTC9CQ8N5M4 171 aa11.91□□□□□ -0.5
CCDC90B-215ENST00000529745 OR5H2Q8NGV7 314 aa11.91□□□□□ -0.5
CCDC90B-215ENST00000529745 OR4A5Q8NH83 315 aa11.91□□□□□ -0.5
CCDC90B-215ENST00000529745 CD300LFQ8TDQ1 290 aa11.91□□□□□ -0.5
CCDC90B-215ENST00000529745 DCUN1D4Q92564 292 aa11.91□□□□□ -0.5
CCDC90B-215ENST00000529745 USMG5Q96IX5 58 aa11.91□□□□□ -0.5
CCDC90B-215ENST00000529745 KRTAP17-1Q9BYP8 105 aa11.91□□□□□ -0.5
CCDC90B-215ENST00000529745 KLK9Q9UKQ9 250 aa11.91□□□□□ -0.5
CCDC90B-215ENST00000529745 COL7A1Q02388 2944 aa11.91□□□□□ -0.5
CCDC90B-215ENST00000529745 TRBV9A0A0B4J1U6 114 aa11.9□□□□□ -0.5
CCDC90B-215ENST00000529745 ACTL6BO94805 426 aa11.9□□□□□ -0.5
CCDC90B-215ENST00000529745 HPRT1P00492 218 aa11.9□□□□□ -0.5
CCDC90B-215ENST00000529745 RCVRNP35243 200 aa11.9□□□□□ -0.5
CCDC90B-215ENST00000529745 TAS2R31P59538 309 aa11.9□□□□□ -0.5
CCDC90B-215ENST00000529745 ZNF343Q6P1L6 599 aa11.9□□□□□ -0.5
CCDC90B-215ENST00000529745 SLC25A42Q86VD7 318 aa11.9□□□□□ -0.5
CCDC90B-215ENST00000529745 TMEM17Q86X19 198 aa11.9□□□□□ -0.5
CCDC90B-215ENST00000529745 OR6F1Q8NGZ6 308 aa11.9□□□□□ -0.5
CCDC90B-215ENST00000529745 DLX4Q92988 240 aaPredicted RBP11.9□□□□□ -0.5
CCDC90B-215ENST00000529745 GPHA2Q96T91 129 aa11.9□□□□□ -0.5
CCDC90B-215ENST00000529745 PHB2Q99623 299 aa11.9□□□□□ -0.5
CCDC90B-215ENST00000529745 ZNF2Q9BSG1 426 aaPredicted RBP11.9□□□□□ -0.5
CCDC90B-215ENST00000529745 FXYD6Q9H0Q3 95 aa11.9□□□□□ -0.5
CCDC90B-215ENST00000529745 PLEKHA2Q9HB19 425 aa11.9□□□□□ -0.5
CCDC90B-215ENST00000529745 RANGRFQ9HD47 186 aaPredicted RBP11.9□□□□□ -0.5
CCDC90B-215ENST00000529745 C13orf42A0A1B0GVH6 325 aa11.89□□□□□ -0.51
CCDC90B-215ENST00000529745 TEX22C9J3V5 150 aa11.89□□□□□ -0.51
CCDC90B-215ENST00000529745 TNFSF12O43508 249 aa11.89□□□□□ -0.51
CCDC90B-215ENST00000529745 IGHV3-11P01762 117 aa11.89□□□□□ -0.51
CCDC90B-215ENST00000529745 PMP2P02689 132 aa11.89□□□□□ -0.51
CCDC90B-215ENST00000529745 ZNF735P0CB33 412 aa11.89□□□□□ -0.51
CCDC90B-215ENST00000529745 HRH1P35367 487 aa11.89□□□□□ -0.51
CCDC90B-215ENST00000529745 SLURP1P55000 103 aa11.89□□□□□ -0.51
CCDC90B-215ENST00000529745 ACSM6Q6P461 480 aa11.89□□□□□ -0.51
CCDC90B-215ENST00000529745 ZNF429Q86V71 674 aa11.89□□□□□ -0.51
CCDC90B-215ENST00000529745 VKORC1L1Q8N0U8 176 aa11.89□□□□□ -0.51
CCDC90B-215ENST00000529745 C15orf40Q8WUR7 153 aa11.89□□□□□ -0.51
CCDC90B-215ENST00000529745 ZNF355PQ9NSJ1 428 aa11.89□□□□□ -0.51
CCDC90B-215ENST00000529745 FAM212BQ9NTI7 297 aaPredicted RBP11.89□□□□□ -0.51
CCDC90B-215ENST00000529745 COA4Q9NYJ1 87 aa11.89□□□□□ -0.51
CCDC90B-215ENST00000529745 COMMD9Q9P000 198 aa11.89□□□□□ -0.51
CCDC90B-215ENST00000529745 FAM223BA6NKX1 122 aa11.88□□□□□ -0.51
CCDC90B-215ENST00000529745 NPIPB5A8MRT5 1133 aa11.88□□□□□ -0.51
CCDC90B-215ENST00000529745 NQO2P16083 231 aa11.88□□□□□ -0.51
CCDC90B-215ENST00000529745 ZP3P21754 424 aa11.88□□□□□ -0.51
CCDC90B-215ENST00000529745 RPL27AP46776 148 aaKnown RBP11.88□□□□□ -0.51
CCDC90B-215ENST00000529745 TMBIM6P55061 237 aa11.88□□□□□ -0.51
CCDC90B-215ENST00000529745 UCP3P55916 312 aa11.88□□□□□ -0.51
CCDC90B-215ENST00000529745 VAX1Q5SQQ9 334 aa11.88□□□□□ -0.51
CCDC90B-215ENST00000529745 C10orf55Q5SWW7 151 aa11.88□□□□□ -0.51
CCDC90B-215ENST00000529745 OR4A47Q6IF82 309 aa11.88□□□□□ -0.51
CCDC90B-215ENST00000529745 LPCAT3Q6P1A2 487 aa11.88□□□□□ -0.51
CCDC90B-215ENST00000529745 SNX29P2Q8IUI4 249 aa11.88□□□□□ -0.51
CCDC90B-215ENST00000529745 FAM223AQ8IWN6 122 aa11.88□□□□□ -0.51
CCDC90B-215ENST00000529745 RAB2BQ8WUD1 216 aa11.88□□□□□ -0.51
CCDC90B-215ENST00000529745 ZNF257Q9Y2Q1 563 aa11.88□□□□□ -0.51
CCDC90B-215ENST00000529745 FAM25AB3EWG3 89 aa11.87□□□□□ -0.51
CCDC90B-215ENST00000529745 FAM25CB3EWG5 89 aa11.87□□□□□ -0.51
CCDC90B-215ENST00000529745 FAM25GB3EWG6 89 aa11.87□□□□□ -0.51
CCDC90B-215ENST00000529745 GPR31O00270 319 aa11.87□□□□□ -0.51
CCDC90B-215ENST00000529745 RBMXL2O75526 392 aaKnown RBP11.87□□□□□ -0.51
CCDC90B-215ENST00000529745 PGLYRP1O75594 196 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-215ENST00000529745 CRYGCP07315 174 aa11.87□□□□□ -0.51
CCDC90B-215ENST00000529745 F2RP25116 425 aa11.87□□□□□ -0.51
CCDC90B-215ENST00000529745 HLA-DMAP28067 261 aa11.87□□□□□ -0.51
CCDC90B-215ENST00000529745 RPL8P62917 257 aaKnown RBP11.87□□□□□ -0.51
CCDC90B-215ENST00000529745 ZNF45Q02386 682 aa11.87□□□□□ -0.51
CCDC90B-215ENST00000529745 SPCS2Q15005 226 aa11.87□□□□□ -0.51
CCDC90B-215ENST00000529745 FAM209BQ5JX69 171 aa11.87□□□□□ -0.51
CCDC90B-215ENST00000529745 MIXL1Q9H2W2 232 aa11.87□□□□□ -0.51
CCDC90B-215ENST00000529745 SLC2A9Q9NRM0 540 aa11.87□□□□□ -0.51
CCDC90B-215ENST00000529745 EXTL2Q9UBQ6 330 aa11.87□□□□□ -0.51
CCDC90B-215ENST00000529745 A0A1B0GW64 132 aa11.86□□□□□ -0.51
CCDC90B-215ENST00000529745 E7EUB6 86 aa11.86□□□□□ -0.51
CCDC90B-215ENST00000529745 MPPED1O15442 326 aa11.86□□□□□ -0.51
CCDC90B-215ENST00000529745 HLA-GP17693 338 aa11.86□□□□□ -0.51
CCDC90B-215ENST00000529745 TBPP20226 339 aa11.86□□□□□ -0.51
CCDC90B-215ENST00000529745 AADACL3Q5VUY0 350 aa11.86□□□□□ -0.51
CCDC90B-215ENST00000529745 CLVS1Q8IUQ0 354 aaPredicted RBP11.86□□□□□ -0.51
CCDC90B-215ENST00000529745 CMTM1Q8IZ96 169 aa11.86□□□□□ -0.51
CCDC90B-215ENST00000529745 OR51H1Q8NH63 302 aa11.86□□□□□ -0.51
CCDC90B-215ENST00000529745 DYNC2LI1Q8TCX1 351 aa11.86□□□□□ -0.51
CCDC90B-215ENST00000529745 SRSF8Q9BRL6 282 aaKnown RBP11.86□□□□□ -0.51
CCDC90B-215ENST00000529745 RSRP1Q9BUV0 290 aa11.86□□□□□ -0.51
CCDC90B-215ENST00000529745 AKIP1Q9NQ31 210 aa11.86□□□□□ -0.51
CCDC90B-215ENST00000529745 CCDC59Q9P031 241 aaKnown RBP11.86□□□□□ -0.51
CCDC90B-215ENST00000529745 PEF1Q9UBV8 284 aaKnown RBP11.86□□□□□ -0.51
CCDC90B-215ENST00000529745 MTFP1Q9UDX5 166 aa11.86□□□□□ -0.51
CCDC90B-215ENST00000529745 LSM4Q9Y4Z0 139 aaKnown RBP11.86□□□□□ -0.51
CCDC90B-215ENST00000529745 SORL1Q92673 2214 aa11.86□□□□□ -0.51
CCDC90B-215ENST00000529745 EPPK1P58107 5090 aaKnown RBP11.85□□□□□ -0.51
CCDC90B-215ENST00000529745 CGB1A6NKQ9 187 aa11.85□□□□□ -0.51
CCDC90B-215ENST00000529745 UPK2O00526 184 aa11.85□□□□□ -0.51
CCDC90B-215ENST00000529745 S1PR2O95136 353 aa11.85□□□□□ -0.51
CCDC90B-215ENST00000529745 RLN1P04808 185 aa11.85□□□□□ -0.51
CCDC90B-215ENST00000529745 APELAP0DMC3 54 aa11.85□□□□□ -0.51
CCDC90B-215ENST00000529745 CTRB1P17538 263 aa11.85□□□□□ -0.51
CCDC90B-215ENST00000529745 PTBP1P26599 531 aaKnown RBP eCLIP11.85□□□□□ -0.51
CCDC90B-215ENST00000529745 RPL5P46777 297 aaKnown RBP11.85□□□□□ -0.51
CCDC90B-215ENST00000529745 MRPS10P82664 201 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms