RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 TSTD3H0UI37 97 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 IGKV1D-12P01611 117 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 GYPCP04921 128 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 HLA-DQB2P05538 268 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 CRHP06850 196 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 APOFQ13790 326 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 PDGFRLQ15198 375 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 KCNJ8Q15842 424 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 GOLT1AQ6ZVE7 132 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 BAP18Q8IXM2 172 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 UMODL1-AS1Q8N2C9 162 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 STX19Q8N4C7 294 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 ANKRD29Q8N6D5 301 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 TMEM35BQ8NCS4 154 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 ROPN1LQ96C74 230 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 TBX5Q99593 518 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 TMEM147Q9BVK8 224 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 C6orf62Q9GZU0 229 aaPredicted RBP2.39□□□□□ -2.03
C11orf88-204ENST00000529661 ABCG5Q9H222 651 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 KCNIP2Q9NS61 270 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 SLC35A3Q9Y2D2 325 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 COQ4Q9Y3A0 265 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 SSH2Q76I76 1423 aa2.39□□□□□ -2.03
C11orf88-204ENST00000529661 PLXND1Q9Y4D7 1925 aa2.38□□□□□ -2.03
C11orf88-204ENST00000529661 IGKV1D-17A0A075B6S4 117 aa2.38□□□□□ -2.03
C11orf88-204ENST00000529661 IGKV1OR2-108A0A075B7D4 117 aa2.38□□□□□ -2.03
C11orf88-204ENST00000529661 CGB3P0DN86 165 aa2.38□□□□□ -2.03
C11orf88-204ENST00000529661 CGB7P0DN87 165 aa2.38□□□□□ -2.03
C11orf88-204ENST00000529661 RPS11P62280 158 aaKnown RBP eCLIP2.38□□□□□ -2.03
C11orf88-204ENST00000529661 RHOBP62745 196 aa2.38□□□□□ -2.03
C11orf88-204ENST00000529661 GNA12Q03113 381 aa2.38□□□□□ -2.03
C11orf88-204ENST00000529661 C12orf74Q32Q52 190 aa2.38□□□□□ -2.03
C11orf88-204ENST00000529661 TMPPEQ6ZT21 453 aa2.38□□□□□ -2.03
C11orf88-204ENST00000529661 C1orf64Q8NEQ6 169 aa2.38□□□□□ -2.03
C11orf88-204ENST00000529661 OR10K1Q8NGX5 313 aa2.38□□□□□ -2.03
C11orf88-204ENST00000529661 OR10J5Q8NHC4 309 aa2.38□□□□□ -2.03
C11orf88-204ENST00000529661 RBPMSQ93062 196 aaKnown RBP2.38□□□□□ -2.03
C11orf88-204ENST00000529661 C1QTNF6Q9BXI9 259 aa2.38□□□□□ -2.03
C11orf88-204ENST00000529661 PLA2G12AQ9BZM1 189 aa2.38□□□□□ -2.03
C11orf88-204ENST00000529661 NKX6-2Q9C056 277 aaPredicted RBP2.38□□□□□ -2.03
C11orf88-204ENST00000529661 OR2D2Q9H210 308 aa2.38□□□□□ -2.03
C11orf88-204ENST00000529661 SH3BGRL3Q9H299 93 aa2.38□□□□□ -2.03
C11orf88-204ENST00000529661 GPR84Q9NQS5 396 aa2.38□□□□□ -2.03
C11orf88-204ENST00000529661 UQCC1Q9NVA1 299 aa2.38□□□□□ -2.03
C11orf88-204ENST00000529661 ZNF586Q9NXT0 402 aa2.38□□□□□ -2.03
C11orf88-204ENST00000529661 PRNDQ9UKY0 176 aa2.38□□□□□ -2.03
C11orf88-204ENST00000529661 DENND4BO75064 1496 aaPredicted RBP2.38□□□□□ -2.03
C11orf88-204ENST00000529661 ROBO3Q96MS0 1386 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 ZNF106Q9H2Y7 1883 aaKnown RBP2.37□□□□□ -2.03
C11orf88-204ENST00000529661 CEP152O94986 1710 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 A0A1B0GW54 56 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 TRAPPC13A5PLN9 417 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 ZNF729A6NN14 1252 aaPredicted RBP2.37□□□□□ -2.03
C11orf88-204ENST00000529661 LST1O00453 97 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 COX7A2LO14548 114 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 MFSD11O43934 449 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 IGKV1-17P01599 117 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 C8GP07360 202 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 INAFM2P0DMQ5 153 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 SCGB1A1P11684 91 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 SPI1P17947 270 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 ATP6V0CP27449 155 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 ZNF140P52738 457 aaPredicted RBP2.37□□□□□ -2.03
C11orf88-204ENST00000529661 AKR1C2P52895 323 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 TAS2R45P59539 299 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 RPS20P60866 119 aaKnown RBP2.37□□□□□ -2.03
C11orf88-204ENST00000529661 BSPH1Q075Z2 132 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 CST6Q15828 149 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 TNFAIP8L3Q5GJ75 292 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 AKR1C8PQ5T2L2 129 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 IBA57Q5T440 356 aaKnown RBP2.37□□□□□ -2.03
C11orf88-204ENST00000529661 TMEM78Q5T7P6 136 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 SCXQ7RTU7 201 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 C3orf22Q8N5N4 141 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 ZNF439Q8NDP4 499 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 SGMS2Q8NHU3 365 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 TSSK6Q9BXA6 273 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 C20orf27Q9GZN8 174 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 COMMD5Q9GZQ3 224 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 CXorf21Q9HAI6 301 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 LYRM2Q9NU23 88 aaPredicted RBP2.37□□□□□ -2.03
C11orf88-204ENST00000529661 ZNF230Q9UIE0 474 aaPredicted RBP2.37□□□□□ -2.03
C11orf88-204ENST00000529661 RPUSD1Q9UJJ7 312 aaKnown RBP2.37□□□□□ -2.03
C11orf88-204ENST00000529661 TMEM56-RWDD3S4R434 201 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 MYH11P35749 1972 aa2.37□□□□□ -2.03
C11orf88-204ENST00000529661 MYH7BA7E2Y1 1941 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 CPDO75976 1380 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 MIA2Q96PC5 1412 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 SIPA1L1O43166 1804 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 TAF1LQ8IZX4 1826 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 A8MUN3 132 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 G3V2T6 193 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 H3BQ85 93 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 PIRO00625 290 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 ORC5O43913 435 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 ZNF682O95780 498 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 CRYZL1O95825 349 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 DHFRP00374 187 aa2.36□□□□□ -2.03
C11orf88-204ENST00000529661 RNASE2P10153 161 aaKnown RBP2.36□□□□□ -2.03
C11orf88-204ENST00000529661 PHBP35232 272 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms