RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 POMPQ9Y244 141 aa3.37□□□□□ -1.87
CSDE1-212ENST00000529046 TRGV10A0A0A0MS01 117 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 IGKV1-9A0A0C4DH69 117 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 KBTBD11-OT1A0A1B0GTJ5 212 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 ZNF729A6NN14 1252 aaPredicted RBP3.36□□□□□ -1.87
CSDE1-212ENST00000529046 G3V2T6 193 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 BUB1B-PAK6H3BSN5 160 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 J3QRE1 110 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 GYG2O15488 501 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 CLIC3O95833 236 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 MRPL3P09001 348 aaKnown RBP3.36□□□□□ -1.87
CSDE1-212ENST00000529046 ATF1P18846 271 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 GZMHP20718 246 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 COX7A1P24310 79 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 PTBP1P26599 531 aaKnown RBP eCLIP3.36□□□□□ -1.87
CSDE1-212ENST00000529046 KCNJ3P48549 501 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 DYNC1I2Q13409 638 aaKnown RBP3.36□□□□□ -1.87
CSDE1-212ENST00000529046 IL18Q14116 193 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 EBI3Q14213 229 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 GRK1Q15835 563 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 ATP6AP1Q15904 470 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 HLA-DRB5Q30154 266 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 NSUN5P1Q3KNT7 163 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 Q3ZCU0 254 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 ELP2Q6IA86 826 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 SLC25A26Q70HW3 274 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 SSX6Q7RTT6 188 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 YIPF7Q8N8F6 280 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 C8orf31Q8N9H6 132 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 ZNF565Q8N9K5 539 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 PXT1Q8NFP0 134 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 OR51D1Q8NGF3 324 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 OR51T1Q8NGJ9 327 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 OR9G1Q8NH87 305 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 STMN2Q93045 179 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 MYDGFQ969H8 173 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 CCDC124Q96CT7 223 aaKnown RBP3.36□□□□□ -1.87
CSDE1-212ENST00000529046 IL4I1Q96RQ9 567 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 GABARAPL3Q9BY60 117 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 PLEKHA1Q9HB21 404 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 GMPPBQ9Y5P6 360 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 COL7A1Q02388 2944 aa3.36□□□□□ -1.87
CSDE1-212ENST00000529046 TCRBV4S1A1TA0A5B7 111 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 SNTNA6NMZ2 147 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 H0YHG0 523 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 K7EIL1 84 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 CCRL2O00421 344 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 RAMP3O60896 148 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 MMP23AO75900 390 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 DUSP14O95147 198 aaKnown RBP3.35□□□□□ -1.87
CSDE1-212ENST00000529046 OR2H2O95918 312 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 IGHG2P01859 326 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 PIPP12273 146 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-212ENST00000529046 PGAM2P15259 253 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 IGLL1P15814 213 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 GABRR1P24046 479 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 CDK2P24941 298 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 PAX6P26367 422 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 MYCNOSP40205 109 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 RAB7AP51149 207 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 SNRPGP62308 76 aaKnown RBP3.35□□□□□ -1.87
CSDE1-212ENST00000529046 FGL1Q08830 312 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 PJVKQ0ZLH3 352 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 BNIP1Q12981 228 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 RNF212Q495C1 297 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 PAN3Q58A45 887 aaKnown RBP3.35□□□□□ -1.87
CSDE1-212ENST00000529046 DMRTC1Q5HYR2 192 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 TPTE2P1Q5T6R2 138 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 PRAMEF5Q5TYX0 476 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 MEDAGQ5VYS4 303 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 DMKNQ6E0U4 476 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-212ENST00000529046 Q6P435 159 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 C2orf66Q6UXQ4 117 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 ASCL4Q6XD76 172 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 FAM220AQ7Z4H9 259 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 SPATA24Q86W54 205 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 SYS1Q8N2H4 156 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 OR4D6Q8NGJ1 314 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 OR5D14Q8NGL3 314 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 OR2G2Q8NGZ5 317 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 NDNFQ8TB73 568 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 CAPSLQ8WWF8 208 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 ADAT3Q96EY9 351 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-212ENST00000529046 CPNE2Q96FN4 548 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-212ENST00000529046 MRPL48Q96GC5 212 aaKnown RBP3.35□□□□□ -1.87
CSDE1-212ENST00000529046 ZNF414Q96IQ9 312 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 OPALINQ96PE5 141 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 P2RX4Q99571 388 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 B9D2Q9BPU9 175 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 EXOSC4Q9NPD3 245 aaKnown RBP3.35□□□□□ -1.87
CSDE1-212ENST00000529046 INPP5EQ9NRR6 644 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 RBFOX1Q9NWB1 397 aaKnown RBP3.35□□□□□ -1.87
CSDE1-212ENST00000529046 EXOSC1Q9Y3B2 195 aaKnown RBP3.35□□□□□ -1.87
CSDE1-212ENST00000529046 AMMECR1Q9Y4X0 333 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-212ENST00000529046 AP4S1Q9Y587 144 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 HILPDAQ9Y5L2 63 aa3.35□□□□□ -1.87
CSDE1-212ENST00000529046 KMT2CQ8NEZ4 4911 aaKnown RBP3.34□□□□□ -1.87
CSDE1-212ENST00000529046 TRAV26-1A0A087WT03 109 aa3.34□□□□□ -1.87
CSDE1-212ENST00000529046 IGKV1-12A0A0C4DH73 117 aa3.34□□□□□ -1.87
CSDE1-212ENST00000529046 LOC107986453A0A1B0GWG9 222 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms