RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 CRYGDP07320 174 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 OR9G9P0C7N8 305 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 CT45A6P0DMU7 189 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 CT45A5P0DMU8 189 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 CT45A7P0DMV0 189 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 PVRP15151 417 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 VDAC1P21796 283 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 AQP1P29972 269 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 GPR183P32249 361 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 GLRXP35754 106 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 FABP6P51161 128 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 DLX6P56179 175 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 RHOAP61586 193 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 RPL23P62829 140 aaKnown RBP3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 ZNF85Q03923 595 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 ZNF117Q03924 483 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 MFGE8Q08431 387 aaPredicted RBP3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 CATR1Q13166 79 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 PDE7AQ13946 482 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 EDDM3AQ14507 147 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 IL11RAQ14626 422 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 CD226Q15762 336 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 Q499Y3 187 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 CT45A1Q5HYN5 189 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 CLEC12AQ5QGZ9 265 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 DCAF12Q5T6F0 453 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 Q6AWC8 147 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 TMEM211Q6ICI0 200 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.06□□□□□ -1.922e-9■■■□□ 16.7
CLNS1A-209ENST00000527299 KCPQ6ZWJ8 1503 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 OOSP2Q86WS3 158 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 HOGA1Q86XE5 327 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 BAGE3Q86Y29 109 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 BAGE2Q86Y30 109 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 ZNF584Q8IVC4 421 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 DOCK4Q8N1I0 1966 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 SCCPDHQ8NBX0 429 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 MORN4Q8NDC4 146 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 OR8B3Q8NGG8 313 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 OR4A16Q8NH70 328 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 OR1L1Q8NH94 360 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 CT45A3Q8NHU0 189 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 C8orf46Q8TAG6 207 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 MRPL30Q8TCC3 161 aaKnown RBP3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 CT55Q8WUE5 264 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 MBD3L1Q8WWY6 194 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 LHX4Q969G2 390 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 BORCS7Q96B45 105 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 FLYWCH2Q96CP2 140 aaKnown RBP3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 SLC35A4Q96G79 324 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 COQ2Q96H96 371 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 DUX3Q96PT4 197 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 OR4C12Q96R67 309 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 OR8B2Q96RD0 313 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 SCN2AQ99250 2005 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 MRPL32Q9BYC8 188 aaKnown RBP3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 PLA2G12AQ9BZM1 189 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 ATG10Q9H0Y0 220 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 MAP1LC3AQ9H492 121 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 WDR76Q9H967 626 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 HES4Q9HCC6 221 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 PLXNA4Q9HCM2 1894 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 ENY2Q9NPA8 101 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 PRTFDC1Q9NRG1 225 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 LIN7CQ9NUP9 197 aaKnown RBP3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 C1orf123Q9NWV4 160 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 CD207Q9UJ71 328 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 CASP8AP2Q9UKL3 1982 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 DHDHQ9UQ10 334 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 POLR1DQ9Y2S0 133 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 TMED7Q9Y3B3 224 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 LOXL2Q9Y4K0 774 aa3.06□□□□□ -1.92
CLNS1A-209ENST00000527299 MED12LQ86YW9 2145 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 GREB1Q4ZG55 1949 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 ANAPC1Q9H1A4 1944 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 CPAMD8Q8IZJ3 1885 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 NUP210Q8TEM1 1887 aaPredicted RBP3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 NUP98P52948 1817 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 LOC102725191A0A1B0GVB3 256 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 ZNF850A8MQ14 1090 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 FAM90A26D6RGX4 464 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 H3BUT2 72 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 J3QLI3 93 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 J3QLW9 94 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 CLDN5O00501 218 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 ISLRO14498 428 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 PRKNO60260 465 aaPredicted RBP3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 PITX3O75364 302 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 ZNF737O75373 536 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 OR7C1O76099 320 aaPredicted RBP3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 CA1P00915 261 aaPredicted RBP3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 APOA2P02652 100 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 MT-ND6P03923 174 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 MT-ATP8P03928 68 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 FAM106CPP0CH98 169 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 PRSS56P0CW18 603 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 COX7A2P14406 83 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 EGR1P18146 543 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 ADRA2CP18825 462 aa3.05□□□□□ -1.92
CLNS1A-209ENST00000527299 ORM2P19652 201 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms