RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 TEX22C9J3V5 150 aa12.04□□□□□ -0.48
PTPRU-210ENST00000527027 FCGR3BO75015 233 aa12.04□□□□□ -0.48
PTPRU-210ENST00000527027 GNB3P16520 340 aa12.04□□□□□ -0.48
PTPRU-210ENST00000527027 CALRP27797 417 aaKnown RBP12.04□□□□□ -0.48
PTPRU-210ENST00000527027 ARL3P36405 182 aa12.04□□□□□ -0.48
PTPRU-210ENST00000527027 RPS25P62851 125 aaKnown RBP12.04□□□□□ -0.48
PTPRU-210ENST00000527027 PMS2P11Q13670 270 aa12.04□□□□□ -0.48
PTPRU-210ENST00000527027 GPR141Q7Z602 305 aa12.04□□□□□ -0.48
PTPRU-210ENST00000527027 UXS1Q8NBZ7 420 aa12.04□□□□□ -0.48
PTPRU-210ENST00000527027 OR10R2Q8NGX6 335 aa12.04□□□□□ -0.48
PTPRU-210ENST00000527027 MLXQ9UH92 298 aa12.04□□□□□ -0.48
PTPRU-210ENST00000527027 PRELID3BQ9Y3B1 194 aa12.04□□□□□ -0.48
PTPRU-210ENST00000527027 TRDV1A0A1B0GX56 115 aa12.03□□□□□ -0.48
PTPRU-210ENST00000527027 ZNF320A2RRD8 509 aa12.03□□□□□ -0.48
PTPRU-210ENST00000527027 DPPA5A6NC42 116 aa12.03□□□□□ -0.48
PTPRU-210ENST00000527027 MFNGO00587 321 aa12.03□□□□□ -0.48
PTPRU-210ENST00000527027 NDUFB8O95169 186 aa12.03□□□□□ -0.48
PTPRU-210ENST00000527027 IGHV3-23P01764 117 aa12.03□□□□□ -0.48
PTPRU-210ENST00000527027 IL6RP08887 468 aaPredicted RBP12.03□□□□□ -0.48
PTPRU-210ENST00000527027 CD36P16671 472 aa12.03□□□□□ -0.48
PTPRU-210ENST00000527027 GADD45AP24522 165 aa12.03□□□□□ -0.48
PTPRU-210ENST00000527027 TALDO1P37837 337 aa12.03□□□□□ -0.48
PTPRU-210ENST00000527027 ALDH3B2P48448 385 aa12.03□□□□□ -0.48
PTPRU-210ENST00000527027 HES5Q5TA89 166 aa12.03□□□□□ -0.48
PTPRU-210ENST00000527027 CLEC19AQ6UXS0 136 aa12.03□□□□□ -0.48
PTPRU-210ENST00000527027 Q6ZS49 121 aa12.03□□□□□ -0.48
PTPRU-210ENST00000527027 C19orf35Q6ZS72 473 aa12.03□□□□□ -0.48
PTPRU-210ENST00000527027 WFDC3Q8IUB2 231 aa12.03□□□□□ -0.48
PTPRU-210ENST00000527027 CCDC140Q96MF4 163 aa12.03□□□□□ -0.48
PTPRU-210ENST00000527027 FANCD2OSQ96PS1 177 aa12.03□□□□□ -0.48
PTPRU-210ENST00000527027 OR51E2Q9H255 320 aa12.03□□□□□ -0.48
PTPRU-210ENST00000527027 SLC2A9Q9NRM0 540 aa12.03□□□□□ -0.48
PTPRU-210ENST00000527027 SSR3Q9UNL2 185 aa12.03□□□□□ -0.48
PTPRU-210ENST00000527027 A0A075B6Q4 140 aa12.02□□□□□ -0.49
PTPRU-210ENST00000527027 A0A0J9YWU9 116 aa12.02□□□□□ -0.49
PTPRU-210ENST00000527027 A8MWP6 167 aa12.02□□□□□ -0.49
PTPRU-210ENST00000527027 J3QRK9 145 aa12.02□□□□□ -0.49
PTPRU-210ENST00000527027 RAB27BO00194 218 aa12.02□□□□□ -0.49
PTPRU-210ENST00000527027 SCAF4O95104 1147 aaKnown RBP12.02□□□□□ -0.49
PTPRU-210ENST00000527027 HIST1H1DP16402 221 aaKnown RBP12.02□□□□□ -0.49
PTPRU-210ENST00000527027 RPL27AP46776 148 aaKnown RBP12.02□□□□□ -0.49
PTPRU-210ENST00000527027 TNFRSF9Q07011 255 aa12.02□□□□□ -0.49
PTPRU-210ENST00000527027 ARFRP1Q13795 201 aa12.02□□□□□ -0.49
PTPRU-210ENST00000527027 TM4SF20Q53R12 229 aa12.02□□□□□ -0.49
PTPRU-210ENST00000527027 OR4A47Q6IF82 309 aa12.02□□□□□ -0.49
PTPRU-210ENST00000527027 CEMP1Q6PRD7 247 aaPredicted RBP12.02□□□□□ -0.49
PTPRU-210ENST00000527027 VKORC1L1Q8N0U8 176 aa12.02□□□□□ -0.49
PTPRU-210ENST00000527027 ZNF645Q8N7E2 425 aa12.02□□□□□ -0.49
PTPRU-210ENST00000527027 OR13F1Q8NGS4 319 aa12.02□□□□□ -0.49
PTPRU-210ENST00000527027 VSTM2AQ8TAG5 236 aa12.02□□□□□ -0.49
PTPRU-210ENST00000527027 FYTTD1Q96QD9 318 aaKnown RBP12.02□□□□□ -0.49
PTPRU-210ENST00000527027 MRPS7Q9Y2R9 242 aaKnown RBP12.02□□□□□ -0.49
PTPRU-210ENST00000527027 IGKV1D-8A0A087WSZ0 117 aa12.01□□□□□ -0.49
PTPRU-210ENST00000527027 TRAV25A0A0B4J276 109 aa12.01□□□□□ -0.49
PTPRU-210ENST00000527027 E7EUB6 86 aa12.01□□□□□ -0.49
PTPRU-210ENST00000527027 NOL3O60936 208 aaKnown RBP12.01□□□□□ -0.49
PTPRU-210ENST00000527027 DHFRP00374 187 aa12.01□□□□□ -0.49
PTPRU-210ENST00000527027 CRYGCP07315 174 aa12.01□□□□□ -0.49
PTPRU-210ENST00000527027 FGF9P31371 208 aaPredicted RBP12.01□□□□□ -0.49
PTPRU-210ENST00000527027 MAS1LP35410 378 aa12.01□□□□□ -0.49
PTPRU-210ENST00000527027 RPL30P62888 115 aaKnown RBP12.01□□□□□ -0.49
PTPRU-210ENST00000527027 EWSR1Q01844 656 aaKnown RBP eCLIP12.01□□□□□ -0.49
PTPRU-210ENST00000527027 SSX1Q16384 188 aa12.01□□□□□ -0.49
PTPRU-210ENST00000527027 KLK9Q2XQG4 91 aa12.01□□□□□ -0.49
PTPRU-210ENST00000527027 KCTD9Q7L273 389 aa12.01□□□□□ -0.49
PTPRU-210ENST00000527027 EEF1AKMT3Q96AZ1 226 aa12.01□□□□□ -0.49
PTPRU-210ENST00000527027 OR2A7Q96R45 310 aa12.01□□□□□ -0.49
PTPRU-210ENST00000527027 BCL7BQ9BQE9 202 aa12.01□□□□□ -0.49
PTPRU-210ENST00000527027 NDUFA13Q9P0J0 144 aa12.01□□□□□ -0.49
PTPRU-210ENST00000527027 KLK9Q9UKQ9 250 aa12.01□□□□□ -0.49
PTPRU-210ENST00000527027 TP53TG1Q9Y2A0 90 aa12.01□□□□□ -0.49
PTPRU-210ENST00000527027 S4R3C0 116 aa12.01□□□□□ -0.49
PTPRU-210ENST00000527027 A0A1B0GW64 132 aa12□□□□□ -0.49
PTPRU-210ENST00000527027 SLC22A5O76082 557 aa12□□□□□ -0.49
PTPRU-210ENST00000527027 HLA-DQB1P01920 261 aa12□□□□□ -0.49
PTPRU-210ENST00000527027 ZNF735P0CB33 412 aa12□□□□□ -0.49
PTPRU-210ENST00000527027 HIST1H1BP16401 226 aaKnown RBP12□□□□□ -0.49
PTPRU-210ENST00000527027 PSMB6P28072 239 aa12□□□□□ -0.49
PTPRU-210ENST00000527027 BMI1P35226 326 aa12□□□□□ -0.49
PTPRU-210ENST00000527027 FABP5Q01469 135 aa12□□□□□ -0.49
PTPRU-210ENST00000527027 OR2B11Q5JQS5 317 aa12□□□□□ -0.49
PTPRU-210ENST00000527027 BTNL8Q6UX41 500 aa12□□□□□ -0.49
PTPRU-210ENST00000527027 RBPMS2Q6ZRY4 209 aaKnown RBP12□□□□□ -0.49
PTPRU-210ENST00000527027 Q6ZWC4 215 aa12□□□□□ -0.49
PTPRU-210ENST00000527027 LYG2Q86SG7 212 aa12□□□□□ -0.49
PTPRU-210ENST00000527027 PUSL1Q8N0Z8 303 aaKnown RBP12□□□□□ -0.49
PTPRU-210ENST00000527027 TMEM167AQ8TBQ9 72 aa12□□□□□ -0.49
PTPRU-210ENST00000527027 MARC2Q969Z3 335 aa12□□□□□ -0.49
PTPRU-210ENST00000527027 YIPF6Q96EC8 236 aa12□□□□□ -0.49
PTPRU-210ENST00000527027 RBMX2Q9Y388 322 aaKnown RBP12□□□□□ -0.49
PTPRU-210ENST00000527027 OR2W1Q9Y3N9 320 aa12□□□□□ -0.49
PTPRU-210ENST00000527027 KMT2AQ03164 3969 aa12□□□□□ -0.49
PTPRU-210ENST00000527027 METTL21EPA6NDL7 271 aa11.99□□□□□ -0.49
PTPRU-210ENST00000527027 SPRY2O43597 315 aa11.99□□□□□ -0.49
PTPRU-210ENST00000527027 KBTBD11O94819 623 aa11.99□□□□□ -0.49
PTPRU-210ENST00000527027 CLEC3BP05452 202 aa11.99□□□□□ -0.49
PTPRU-210ENST00000527027 CTXN2P0C2S0 81 aa11.99□□□□□ -0.49
PTPRU-210ENST00000527027 C8orf88P0DMB2 117 aa11.99□□□□□ -0.49
PTPRU-210ENST00000527027 AREGP15514 252 aa11.99□□□□□ -0.49
PTPRU-210ENST00000527027 CTRB1P17538 263 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms