RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 NMSQ5H8A3 153 aa10.18□□□□□ -0.78
SSSCA1-203ENST00000526877 RUSC1-AS1Q66K80 236 aa10.18□□□□□ -0.78
SSSCA1-203ENST00000526877 Q6YL49 198 aa10.18□□□□□ -0.78
SSSCA1-203ENST00000526877 TCTE3Q8IZS6 198 aa10.18□□□□□ -0.78
SSSCA1-203ENST00000526877 ZBTB8BQ8NAP8 495 aaPredicted RBP10.18□□□□□ -0.78
SSSCA1-203ENST00000526877 TAF15Q92804 592 aaKnown RBP eCLIP10.18□□□□□ -0.78
SSSCA1-203ENST00000526877 GPR146Q96CH1 333 aa10.18□□□□□ -0.78
SSSCA1-203ENST00000526877 HARBI1Q96MB7 349 aa10.18□□□□□ -0.78
SSSCA1-203ENST00000526877 FYTTD1Q96QD9 318 aaKnown RBP10.18□□□□□ -0.78
SSSCA1-203ENST00000526877 GSKIPQ9P0R6 139 aa10.18□□□□□ -0.78
SSSCA1-203ENST00000526877 FAM96BQ9Y3D0 163 aa10.18□□□□□ -0.78
SSSCA1-203ENST00000526877 IGHV3-72A0A0B4J1Y9 119 aa10.17□□□□□ -0.78
SSSCA1-203ENST00000526877 MPTX1A8MV57 137 aa10.17□□□□□ -0.78
SSSCA1-203ENST00000526877 LGALS7P47929 136 aa10.17□□□□□ -0.78
SSSCA1-203ENST00000526877 FGL1Q08830 312 aa10.17□□□□□ -0.78
SSSCA1-203ENST00000526877 SMCO1Q147U7 214 aa10.17□□□□□ -0.78
SSSCA1-203ENST00000526877 PIP4P2Q8N4L2 257 aa10.17□□□□□ -0.78
SSSCA1-203ENST00000526877 OR1S1Q8NH92 325 aa10.17□□□□□ -0.78
SSSCA1-203ENST00000526877 RHOVQ96L33 236 aa10.17□□□□□ -0.78
SSSCA1-203ENST00000526877 RNF5Q99942 180 aa10.17□□□□□ -0.78
SSSCA1-203ENST00000526877 ZNF747Q9BV97 191 aa10.17□□□□□ -0.78
SSSCA1-203ENST00000526877 ZFP57Q9NU63 452 aa10.17□□□□□ -0.78
SSSCA1-203ENST00000526877 A0A0G2JRQ6 117 aa10.16□□□□□ -0.78
SSSCA1-203ENST00000526877 FAM90A9PA6NNJ1 464 aa10.16□□□□□ -0.78
SSSCA1-203ENST00000526877 HOXA3O43365 443 aaPredicted RBP10.16□□□□□ -0.78
SSSCA1-203ENST00000526877 SNAPC5O75971 98 aa10.16□□□□□ -0.78
SSSCA1-203ENST00000526877 IGKV1-16P04430 117 aa10.16□□□□□ -0.78
SSSCA1-203ENST00000526877 HABP2Q14520 560 aaPredicted RBP10.16□□□□□ -0.78
SSSCA1-203ENST00000526877 POU2AF1Q16633 256 aa10.16□□□□□ -0.78
SSSCA1-203ENST00000526877 SSX9Q7RTT3 188 aa10.16□□□□□ -0.78
SSSCA1-203ENST00000526877 DYNAPQ8N1N2 210 aa10.16□□□□□ -0.78
SSSCA1-203ENST00000526877 OR2T35Q8NGX2 323 aa10.16□□□□□ -0.78
SSSCA1-203ENST00000526877 OR2T10Q8NGZ9 312 aa10.16□□□□□ -0.78
SSSCA1-203ENST00000526877 C17orf50Q8WW18 174 aa10.16□□□□□ -0.78
SSSCA1-203ENST00000526877 CFHR4Q92496 578 aa10.16□□□□□ -0.78
SSSCA1-203ENST00000526877 TSNAXQ99598 290 aaKnown RBP10.16□□□□□ -0.78
SSSCA1-203ENST00000526877 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.16□□□□□ -0.78
SSSCA1-203ENST00000526877 CACNG5Q9UF02 275 aa10.16□□□□□ -0.78
SSSCA1-203ENST00000526877 RBMXL2O75526 392 aaKnown RBP10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 MOSP00540 346 aa10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 RLN2P04090 185 aa10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 HNRNPCP07910 306 aaKnown RBP eCLIP10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 FBP1P09467 338 aa10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 P0C879 139 aa10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 PSMB6P28072 239 aa10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 CD300CQ08708 224 aa10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 HES1Q14469 280 aa10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 VMA21Q3ZAQ7 101 aa10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 ZFP69Q49AA0 526 aa10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 VKORC1L1Q8N0U8 176 aa10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 OR4A16Q8NH70 328 aa10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 VSTM2AQ8TAG5 236 aa10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 PPP1R1CQ8WVI7 109 aa10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 WDR89Q96FK6 387 aaPredicted RBP10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 AJUBAQ96IF1 538 aa10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 MEGF9Q9H1U4 602 aa10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 TMEM140Q9NV12 185 aa10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 COA4Q9NYJ1 87 aa10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 CACFD1Q9UGQ2 172 aa10.15□□□□□ -0.78
SSSCA1-203ENST00000526877 A0A0U1RQK1 487 aa10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 SRRM4A7MD48 611 aaKnown RBP10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 SCGB1D2O95969 90 aa10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 IGKV1D-33P01593 117 aa10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 IGKV1-33P01594 117 aa10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 C1QBP02746 253 aa10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 FAM106CPP0CH98 169 aa10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 PET100P0DJ07 73 aa10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 NKX2-1P43699 371 aaPredicted RBP10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 UBE2KP61086 200 aa10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 IL15RAQ13261 267 aa10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 IZUMO4Q1ZYL8 232 aa10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 LRRC37A5PQ49AS3 106 aa10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 OR4A47Q6IF82 309 aa10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 Q6ZRM9 215 aa10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 THNSL2Q86YJ6 484 aa10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 OR4D5Q8NGN0 318 aa10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 OR4A5Q8NH83 315 aa10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 THAP6Q8TBB0 222 aa10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 ZDHHC16Q969W1 377 aa10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 BET1LQ9NYM9 111 aa10.14□□□□□ -0.79
SSSCA1-203ENST00000526877 FAM181BA6NEQ2 426 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 FAM90A26D6RGX4 464 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 SMLR1H3BR10 107 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 WRBO00258 174 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 UPK2O00526 184 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 ST8SIA3O43173 380 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 PITX3O75364 302 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 MPC2O95563 127 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 SNRNP70P08621 437 aaKnown RBP10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 OR9G9P0C7N8 305 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 SAA1P0DJI8 122 aaPredicted RBP10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 PAX6P26367 422 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 DYNLT3P51808 116 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 S100A10P60903 97 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 RELBQ01201 579 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 RAB32Q13637 225 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 EBI3Q14213 229 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 SHISA2Q6UWI4 295 aa10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 PUSL1Q8N0Z8 303 aaKnown RBP10.13□□□□□ -0.79
SSSCA1-203ENST00000526877 TMEM86BQ8N661 226 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms