RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 OR5H2Q8NGV7 314 aa10.3□□□□□ -0.76
USH1C-203ENST00000526181 OR51H1Q8NH63 302 aa10.3□□□□□ -0.76
USH1C-203ENST00000526181 VSTM2AQ8TAG5 236 aa10.3□□□□□ -0.76
USH1C-203ENST00000526181 SPIN2AQ99865 258 aa10.3□□□□□ -0.76
USH1C-203ENST00000526181 SPIN2BQ9BPZ2 258 aa10.3□□□□□ -0.76
USH1C-203ENST00000526181 FXYD6Q9H0Q3 95 aa10.3□□□□□ -0.76
USH1C-203ENST00000526181 RANGRFQ9HD47 186 aaPredicted RBP10.3□□□□□ -0.76
USH1C-203ENST00000526181 AKIP1Q9NQ31 210 aa10.3□□□□□ -0.76
USH1C-203ENST00000526181 APOA1P02647 267 aa10.29□□□□□ -0.76
USH1C-203ENST00000526181 AREGP15514 252 aa10.29□□□□□ -0.76
USH1C-203ENST00000526181 HLA-DMAP28067 261 aa10.29□□□□□ -0.76
USH1C-203ENST00000526181 GNRHRP30968 328 aa10.29□□□□□ -0.76
USH1C-203ENST00000526181 KIR2DS2P43631 304 aa10.29□□□□□ -0.76
USH1C-203ENST00000526181 RPL27AP46776 148 aaKnown RBP10.29□□□□□ -0.76
USH1C-203ENST00000526181 RORCP51449 518 aa10.29□□□□□ -0.76
USH1C-203ENST00000526181 RHOGP84095 191 aa10.29□□□□□ -0.76
USH1C-203ENST00000526181 AADACL3Q5VUY0 350 aa10.29□□□□□ -0.76
USH1C-203ENST00000526181 OR4A47Q6IF82 309 aa10.29□□□□□ -0.76
USH1C-203ENST00000526181 DHRS11Q6UWP2 260 aa10.29□□□□□ -0.76
USH1C-203ENST00000526181 ANKRD13BQ86YJ7 626 aa10.29□□□□□ -0.76
USH1C-203ENST00000526181 TTC9CQ8N5M4 171 aa10.29□□□□□ -0.76
USH1C-203ENST00000526181 GPX8Q8TED1 209 aa10.29□□□□□ -0.76
USH1C-203ENST00000526181 MOB3AQ96BX8 217 aa10.29□□□□□ -0.76
USH1C-203ENST00000526181 USMG5Q96IX5 58 aa10.29□□□□□ -0.76
USH1C-203ENST00000526181 FYTTD1Q96QD9 318 aaKnown RBP10.29□□□□□ -0.76
USH1C-203ENST00000526181 PEF1Q9UBV8 284 aaKnown RBP10.29□□□□□ -0.76
USH1C-203ENST00000526181 TRBV9A0A0B4J1U6 114 aa10.28□□□□□ -0.76
USH1C-203ENST00000526181 TRAV3A0A0B4J244 114 aa10.28□□□□□ -0.76
USH1C-203ENST00000526181 CGB1A6NKQ9 187 aa10.28□□□□□ -0.76
USH1C-203ENST00000526181 RBFOX2O43251 390 aaKnown RBP eCLIP10.28□□□□□ -0.76
USH1C-203ENST00000526181 S1PR2O95136 353 aa10.28□□□□□ -0.76
USH1C-203ENST00000526181 HRASP01112 189 aa10.28□□□□□ -0.76
USH1C-203ENST00000526181 RLN1P04808 185 aa10.28□□□□□ -0.76
USH1C-203ENST00000526181 ZNF735P0CB33 412 aa10.28□□□□□ -0.76
USH1C-203ENST00000526181 RPA2P15927 270 aa10.28□□□□□ -0.76
USH1C-203ENST00000526181 ZP3P21754 424 aa10.28□□□□□ -0.76
USH1C-203ENST00000526181 HRH1P35367 487 aa10.28□□□□□ -0.76
USH1C-203ENST00000526181 SYNJ2BPP57105 145 aa10.28□□□□□ -0.76
USH1C-203ENST00000526181 TAS2R46P59540 309 aa10.28□□□□□ -0.76
USH1C-203ENST00000526181 CATR1Q13166 79 aa10.28□□□□□ -0.76
USH1C-203ENST00000526181 EXOSC2Q13868 293 aaKnown RBP10.28□□□□□ -0.76
USH1C-203ENST00000526181 KLF5Q13887 457 aaPredicted RBP10.28□□□□□ -0.76
USH1C-203ENST00000526181 RNASE12Q5GAN4 147 aaKnown RBP10.28□□□□□ -0.76
USH1C-203ENST00000526181 CMTM3Q96MX0 182 aa10.28□□□□□ -0.76
USH1C-203ENST00000526181 OR4C12Q96R67 309 aa10.28□□□□□ -0.76
USH1C-203ENST00000526181 RSRP1Q9BUV0 290 aa10.28□□□□□ -0.76
USH1C-203ENST00000526181 HRASLSQ9HDD0 168 aa10.28□□□□□ -0.76
USH1C-203ENST00000526181 SMIM31A0A1B0GVY4 71 aa10.27□□□□□ -0.77
USH1C-203ENST00000526181 FAM223BA6NKX1 122 aa10.27□□□□□ -0.77
USH1C-203ENST00000526181 PGLYRP1O75594 196 aaPredicted RBP10.27□□□□□ -0.77
USH1C-203ENST00000526181 OR2J3O76001 311 aa10.27□□□□□ -0.77
USH1C-203ENST00000526181 HPRT1P00492 218 aa10.27□□□□□ -0.77
USH1C-203ENST00000526181 REG1AP05451 166 aa10.27□□□□□ -0.77
USH1C-203ENST00000526181 HLA-GP17693 338 aa10.27□□□□□ -0.77
USH1C-203ENST00000526181 RPL8P62917 257 aaKnown RBP10.27□□□□□ -0.77
USH1C-203ENST00000526181 DCTN2Q13561 401 aaKnown RBP10.27□□□□□ -0.77
USH1C-203ENST00000526181 IL34Q6ZMJ4 242 aa10.27□□□□□ -0.77
USH1C-203ENST00000526181 FAM223AQ8IWN6 122 aa10.27□□□□□ -0.77
USH1C-203ENST00000526181 MRPS26Q9BYN8 205 aaKnown RBP10.27□□□□□ -0.77
USH1C-203ENST00000526181 BET1LQ9NYM9 111 aa10.27□□□□□ -0.77
USH1C-203ENST00000526181 NPIPB5A8MRT5 1133 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 FAM25AB3EWG3 89 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 FAM25CB3EWG5 89 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 FAM25GB3EWG6 89 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 BMPR1BO00238 502 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 GP9P14770 177 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 MAS1LP35410 378 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 ALDH3B2P48448 385 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 TAS2R31P59538 309 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 ATP5G2Q06055 141 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 C15orf32Q32M92 178 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 VAX1Q5SQQ9 334 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 NECAP1Q8NC96 275 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 OR9G4Q8NGQ1 327 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 OR6Q1Q8NGQ2 317 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 OR6F1Q8NGZ6 308 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 OR4A5Q8NH83 315 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 ASCL2Q99929 193 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 ELOVL1Q9BW60 279 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 SCPEP1Q9HB40 452 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 SLC2A9Q9NRM0 540 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 TMEM140Q9NV12 185 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 ZNF257Q9Y2Q1 563 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 S4R3C0 116 aa10.26□□□□□ -0.77
USH1C-203ENST00000526181 DPPA5A6NC42 116 aa10.25□□□□□ -0.77
USH1C-203ENST00000526181 UPK2O00526 184 aa10.25□□□□□ -0.77
USH1C-203ENST00000526181 IGLV1-51P01701 117 aa10.25□□□□□ -0.77
USH1C-203ENST00000526181 IGHV3-23P01764 117 aa10.25□□□□□ -0.77
USH1C-203ENST00000526181 NQO2P16083 231 aa10.25□□□□□ -0.77
USH1C-203ENST00000526181 ZNF182P17025 639 aaPredicted RBP10.25□□□□□ -0.77
USH1C-203ENST00000526181 PSMB6P28072 239 aa10.25□□□□□ -0.77
USH1C-203ENST00000526181 RCVRNP35243 200 aa10.25□□□□□ -0.77
USH1C-203ENST00000526181 OR2B8PP59922 312 aa10.25□□□□□ -0.77
USH1C-203ENST00000526181 SPCS2Q15005 226 aa10.25□□□□□ -0.77
USH1C-203ENST00000526181 POU2AF1Q16633 256 aa10.25□□□□□ -0.77
USH1C-203ENST00000526181 RPEL1Q2QD12 228 aa10.25□□□□□ -0.77
USH1C-203ENST00000526181 MZT2AQ6P582 158 aa10.25□□□□□ -0.77
USH1C-203ENST00000526181 GPR141Q7Z602 305 aa10.25□□□□□ -0.77
USH1C-203ENST00000526181 DMBX1Q8NFW5 382 aa10.25□□□□□ -0.77
USH1C-203ENST00000526181 FANCD2OSQ96PS1 177 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms