RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 PMCHP20382 165 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 MPV17P39210 176 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 RPL31P62899 125 aaKnown RBP10.95□□□□□ -0.66
CAPN1-202ENST00000524773 MAJINQ3KP22 176 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 OR8I2Q8N0Y5 310 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 CT55Q8WUE5 264 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 NINJ1Q92982 152 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 COQ2Q96H96 371 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 MGST2Q99735 147 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 WNT10AQ9GZT5 417 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 HEYLQ9NQ87 328 aaPredicted RBP10.95□□□□□ -0.66
CAPN1-202ENST00000524773 TNCP24821 2201 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 YPEL1O60688 119 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 BRS3P32247 399 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 RPL39P5Q59GN2 51 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 DCAF10Q5QP82 559 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 DOLPP1Q86YN1 238 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 FAM19A2Q8N3H0 131 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 NHLRC2Q8NBF2 726 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 BTF3L4Q96K17 158 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 RCHY1Q96PM5 261 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 YPEL2Q96QA6 119 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 HINT2Q9BX68 163 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 RNASE7Q9H1E1 156 aaKnown RBP10.95□□□□□ -0.66
CAPN1-202ENST00000524773 ZNF703Q9H7S9 590 aaPredicted RBP10.95□□□□□ -0.66
CAPN1-202ENST00000524773 MBNL3Q9NUK0 354 aaKnown RBP10.95□□□□□ -0.66
CAPN1-202ENST00000524773 TTC28Q96AY4 2481 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 AGFG2O95081 481 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 CA1P00915 261 aaPredicted RBP10.95□□□□□ -0.66
CAPN1-202ENST00000524773 GATA2P23769 480 aaPredicted RBP10.95□□□□□ -0.66
CAPN1-202ENST00000524773 LCN2P80188 198 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 PLGLB1Q02325 96 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 PDLIM3Q53GG5 364 aaPredicted RBP10.95□□□□□ -0.66
CAPN1-202ENST00000524773 TREML4Q6UXN2 200 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 MOB3BQ86TA1 216 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 SLC25A40Q8TBP6 338 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 TMEM45BQ96B21 275 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 VAMP8Q9BV40 100 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 RTL8AQ9BWD3 113 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 TP73-AS1Q9UF72 201 aa10.95□□□□□ -0.66
CAPN1-202ENST00000524773 TET2Q6N021 2002 aaPredicted RBP10.94□□□□□ -0.66
CAPN1-202ENST00000524773 NPIPB11E5RHQ5 1161 aa10.94□□□□□ -0.66
CAPN1-202ENST00000524773 TCF21O43680 179 aa10.94□□□□□ -0.66
CAPN1-202ENST00000524773 PROP1O75360 226 aa10.94□□□□□ -0.66
CAPN1-202ENST00000524773 ST6GALNAC3Q8NDV1 305 aa10.94□□□□□ -0.66
CAPN1-202ENST00000524773 Q8TCH9 128 aa10.94□□□□□ -0.66
CAPN1-202ENST00000524773 R3HDM4Q96D70 268 aa10.94□□□□□ -0.66
CAPN1-202ENST00000524773 LRFN3Q9BTN0 628 aa10.94□□□□□ -0.66
CAPN1-202ENST00000524773 PARD6GQ9BYG4 376 aaPredicted RBP10.94□□□□□ -0.66
CAPN1-202ENST00000524773 TTTY12Q9BZ98 90 aa10.94□□□□□ -0.66
CAPN1-202ENST00000524773 FAM90A26D6RGX4 464 aa10.94□□□□□ -0.66
CAPN1-202ENST00000524773 C17orf112F2Z3M2 114 aa10.94□□□□□ -0.66
CAPN1-202ENST00000524773 ARR3P36575 388 aa10.94□□□□□ -0.66
CAPN1-202ENST00000524773 ERASQ7Z444 233 aa10.94□□□□□ -0.66
CAPN1-202ENST00000524773 LINC00596Q86U02 117 aa10.94□□□□□ -0.66
CAPN1-202ENST00000524773 TMEM251Q8N6I4 163 aa10.94□□□□□ -0.66
CAPN1-202ENST00000524773 UHRF2Q96PU4 802 aa10.94□□□□□ -0.66
CAPN1-202ENST00000524773 MRPS18CQ9Y3D5 142 aaKnown RBP10.94□□□□□ -0.66
CAPN1-202ENST00000524773 IGKV3D-15A0A087WSY6 115 aa10.93□□□□□ -0.66
CAPN1-202ENST00000524773 RNF212BA8MTL3 300 aa10.93□□□□□ -0.66
CAPN1-202ENST00000524773 PDE6DO43924 150 aa10.93□□□□□ -0.66
CAPN1-202ENST00000524773 WISP2O76076 250 aa10.93□□□□□ -0.66
CAPN1-202ENST00000524773 CGAP01215 116 aa10.93□□□□□ -0.66
CAPN1-202ENST00000524773 COMPP49747 757 aaPredicted RBP10.93□□□□□ -0.66
CAPN1-202ENST00000524773 ERVK11-1P61568 191 aa10.93□□□□□ -0.66
CAPN1-202ENST00000524773 FOXF2Q12947 444 aa10.93□□□□□ -0.66
CAPN1-202ENST00000524773 ATP6V1FQ16864 119 aa10.93□□□□□ -0.66
CAPN1-202ENST00000524773 PKIBQ9C010 78 aa10.93□□□□□ -0.66
CAPN1-202ENST00000524773 TPPP2P59282 170 aa10.93□□□□□ -0.66
CAPN1-202ENST00000524773 FOXL1Q12952 345 aa10.93□□□□□ -0.66
CAPN1-202ENST00000524773 PRAMEF5Q5TYX0 476 aa10.93□□□□□ -0.66
CAPN1-202ENST00000524773 PEAR1Q5VY43 1037 aaPredicted RBP10.93□□□□□ -0.66
CAPN1-202ENST00000524773 MRPL54Q6P161 138 aaKnown RBP10.93□□□□□ -0.66
CAPN1-202ENST00000524773 OR5AU1Q8NGC0 362 aa10.93□□□□□ -0.66
CAPN1-202ENST00000524773 MIEN1Q9BRT3 115 aa10.93□□□□□ -0.66
CAPN1-202ENST00000524773 GNB4Q9HAV0 340 aa10.93□□□□□ -0.66
CAPN1-202ENST00000524773 BOKQ9UMX3 212 aaPredicted RBP10.93□□□□□ -0.66
CAPN1-202ENST00000524773 WDR83OSQ9Y284 106 aa10.93□□□□□ -0.66
CAPN1-202ENST00000524773 TMEM30CPA0ZSE6 113 aa10.92□□□□□ -0.66
CAPN1-202ENST00000524773 CER1O95813 267 aa10.92□□□□□ -0.66
CAPN1-202ENST00000524773 CATR1Q13166 79 aa10.92□□□□□ -0.66
CAPN1-202ENST00000524773 OR4P4Q8NGL7 312 aa10.92□□□□□ -0.66
CAPN1-202ENST00000524773 C1orf159Q96HA4 380 aa10.92□□□□□ -0.66
CAPN1-202ENST00000524773 KCNIP2Q9NS61 270 aa10.92□□□□□ -0.66
CAPN1-202ENST00000524773 WIPI2Q9Y4P8 454 aa10.92□□□□□ -0.66
CAPN1-202ENST00000524773 TACC2O95359 2948 aa10.92□□□□□ -0.66
CAPN1-202ENST00000524773 EIF4EBP1Q13541 118 aaPredicted RBP10.92□□□□□ -0.66
CAPN1-202ENST00000524773 OR1C1Q15619 314 aa10.92□□□□□ -0.66
CAPN1-202ENST00000524773 GGTLC1Q9BX51 225 aa10.92□□□□□ -0.66
CAPN1-202ENST00000524773 ROS1P08922 2347 aa10.92□□□□□ -0.66
CAPN1-202ENST00000524773 TMPRSS2O15393 492 aa10.92□□□□□ -0.66
CAPN1-202ENST00000524773 TNFSF13O75888 250 aa10.92□□□□□ -0.66
CAPN1-202ENST00000524773 FABP6P51161 128 aa10.92□□□□□ -0.66
CAPN1-202ENST00000524773 LCN12Q6JVE5 192 aa10.92□□□□□ -0.66
CAPN1-202ENST00000524773 C1orf229Q6ZS94 237 aaPredicted RBP10.92□□□□□ -0.66
CAPN1-202ENST00000524773 MOB1BQ7L9L4 216 aa10.92□□□□□ -0.66
CAPN1-202ENST00000524773 FAM216AQ8WUB2 273 aa10.92□□□□□ -0.66
CAPN1-202ENST00000524773 LINC00470Q9BZP3 86 aa10.92□□□□□ -0.66
CAPN1-202ENST00000524773 TUBG2Q9NRH3 451 aa10.92□□□□□ -0.66
CAPN1-202ENST00000524773 NAT8BQ9UHF3 227 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms