RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 OGG1O15527 345 aa12.54□□□□□ -0.4
PVT1-220ENST00000524165 TGOLN2O43493 480 aa12.54□□□□□ -0.4
PVT1-220ENST00000524165 UBBP0CG47 229 aa12.54□□□□□ -0.4
PVT1-220ENST00000524165 DEFA4P12838 97 aa12.54□□□□□ -0.4
PVT1-220ENST00000524165 SRMP19623 302 aa12.54□□□□□ -0.4
PVT1-220ENST00000524165 DUTP33316 252 aaKnown RBP12.54□□□□□ -0.4
PVT1-220ENST00000524165 NKAIN3Q8N8D7 197 aa12.54□□□□□ -0.4
PVT1-220ENST00000524165 FAM210BQ96KR6 192 aa12.54□□□□□ -0.4
PVT1-220ENST00000524165 HDHD3Q9BSH5 251 aaPredicted RBP12.54□□□□□ -0.4
PVT1-220ENST00000524165 TM2D1Q9BX74 207 aa12.54□□□□□ -0.4
PVT1-220ENST00000524165 TMEM59Q9BXS4 323 aa12.54□□□□□ -0.4
PVT1-220ENST00000524165 OR51E2Q9H255 320 aa12.54□□□□□ -0.4
PVT1-220ENST00000524165 AK3Q9UIJ7 227 aa12.54□□□□□ -0.4
PVT1-220ENST00000524165 X6R8D5 127 aa12.54□□□□□ -0.4
PVT1-220ENST00000524165 TRBV5-7A0A0A0MS05 114 aa12.53□□□□□ -0.4
PVT1-220ENST00000524165 A0A1B0GW64 132 aa12.53□□□□□ -0.4
PVT1-220ENST00000524165 LINC00473A8K010 186 aa12.53□□□□□ -0.4
PVT1-220ENST00000524165 NDUFA4O00483 81 aa12.53□□□□□ -0.4
PVT1-220ENST00000524165 LIMS3P0CW19 117 aa12.53□□□□□ -0.4
PVT1-220ENST00000524165 LIMS4P0CW20 117 aa12.53□□□□□ -0.4
PVT1-220ENST00000524165 PTBP1P26599 531 aaKnown RBP eCLIP12.53□□□□□ -0.4
PVT1-220ENST00000524165 MAS1LP35410 378 aa12.53□□□□□ -0.4
PVT1-220ENST00000524165 RPS11P62280 158 aaKnown RBP eCLIP12.53□□□□□ -0.4
PVT1-220ENST00000524165 YIF1BQ5BJH7 314 aa12.53□□□□□ -0.4
PVT1-220ENST00000524165 ZNF767PQ75MW2 155 aa12.53□□□□□ -0.4
PVT1-220ENST00000524165 OR2A7Q96R45 310 aa12.53□□□□□ -0.4
PVT1-220ENST00000524165 RNF2Q99496 336 aa12.53□□□□□ -0.4
PVT1-220ENST00000524165 GIG44P09565 113 aaPredicted RBP12.52□□□□□ -0.41
PVT1-220ENST00000524165 NPY1RP25929 384 aa12.52□□□□□ -0.41
PVT1-220ENST00000524165 TFPI2P48307 235 aa12.52□□□□□ -0.41
PVT1-220ENST00000524165 OR2G6Q5TZ20 316 aa12.52□□□□□ -0.41
PVT1-220ENST00000524165 OR10K2Q6IF99 312 aa12.52□□□□□ -0.41
PVT1-220ENST00000524165 MORN3Q6PF18 240 aaPredicted RBP12.52□□□□□ -0.41
PVT1-220ENST00000524165 OR52I1Q8NGK6 324 aa12.52□□□□□ -0.41
PVT1-220ENST00000524165 SLC29A1Q99808 456 aa12.52□□□□□ -0.41
PVT1-220ENST00000524165 NICN1Q9BSH3 213 aa12.52□□□□□ -0.41
PVT1-220ENST00000524165 C12orf4Q9NQ89 552 aa12.52□□□□□ -0.41
PVT1-220ENST00000524165 AASSQ9UDR5 926 aa12.52□□□□□ -0.41
PVT1-220ENST00000524165 A0A1W2PPK0 400 aa12.51□□□□□ -0.41
PVT1-220ENST00000524165 TRDCB7Z8K6 153 aa12.51□□□□□ -0.41
PVT1-220ENST00000524165 KBTBD11O94819 623 aa12.51□□□□□ -0.41
PVT1-220ENST00000524165 PSMD7P51665 324 aa12.51□□□□□ -0.41
PVT1-220ENST00000524165 SPATA12Q7Z6I5 190 aa12.51□□□□□ -0.41
PVT1-220ENST00000524165 OR4A4PQ8NGN8 299 aa12.51□□□□□ -0.41
PVT1-220ENST00000524165 VSTM2AQ8TAG5 236 aa12.51□□□□□ -0.41
PVT1-220ENST00000524165 C20orf24Q9BUV8 137 aa12.51□□□□□ -0.41
PVT1-220ENST00000524165 RNF167Q9H6Y7 350 aa12.51□□□□□ -0.41
PVT1-220ENST00000524165 MRPS18AQ9NVS2 196 aaKnown RBP12.51□□□□□ -0.41
PVT1-220ENST00000524165 SMPD3Q9NY59 655 aaPredicted RBP12.51□□□□□ -0.41
PVT1-220ENST00000524165 THYN1Q9P016 225 aa12.51□□□□□ -0.41
PVT1-220ENST00000524165 SMPXQ9UHP9 88 aa12.51□□□□□ -0.41
PVT1-220ENST00000524165 C15orf62A8K5M9 175 aa12.5□□□□□ -0.41
PVT1-220ENST00000524165 GABRB1P18505 474 aa12.5□□□□□ -0.41
PVT1-220ENST00000524165 ARFRP1Q13795 201 aa12.5□□□□□ -0.41
PVT1-220ENST00000524165 SPSB3Q6PJ21 355 aa12.5□□□□□ -0.41
PVT1-220ENST00000524165 C6orf223Q8N319 242 aa12.5□□□□□ -0.41
PVT1-220ENST00000524165 OR6M1Q8NGM8 313 aa12.5□□□□□ -0.41
PVT1-220ENST00000524165 TMEM167AQ8TBQ9 72 aa12.5□□□□□ -0.41
PVT1-220ENST00000524165 BSCL2Q96G97 398 aaPredicted RBP12.5□□□□□ -0.41
PVT1-220ENST00000524165 C18orf15Q96N68 181 aa12.5□□□□□ -0.41
PVT1-220ENST00000524165 DCUN1D5Q9BTE7 237 aa12.5□□□□□ -0.41
PVT1-220ENST00000524165 AMBNQ9NP70 447 aa12.5□□□□□ -0.41
PVT1-220ENST00000524165 POMPQ9Y244 141 aa12.5□□□□□ -0.41
PVT1-220ENST00000524165 CHEK1O14757 476 aa12.49□□□□□ -0.41
PVT1-220ENST00000524165 ZNF207O43670 478 aaKnown RBP12.49□□□□□ -0.41
PVT1-220ENST00000524165 DFFBO76075 338 aa12.49□□□□□ -0.41
PVT1-220ENST00000524165 REG1AP05451 166 aa12.49□□□□□ -0.41
PVT1-220ENST00000524165 FAM3BP58499 235 aaPredicted RBP12.49□□□□□ -0.41
PVT1-220ENST00000524165 TMPRSS11AQ6ZMR5 421 aa12.49□□□□□ -0.41
PVT1-220ENST00000524165 AMIGO2Q86SJ2 522 aa12.49□□□□□ -0.41
PVT1-220ENST00000524165 STHQ8IWL8 128 aa12.49□□□□□ -0.41
PVT1-220ENST00000524165 VN1R17PQ8TDU5 208 aa12.49□□□□□ -0.41
PVT1-220ENST00000524165 GGHQ92820 318 aa12.49□□□□□ -0.41
PVT1-220ENST00000524165 CMTM3Q96MX0 182 aa12.49□□□□□ -0.41
PVT1-220ENST00000524165 RHPN1-AS1Q9BWJ2 59 aa12.49□□□□□ -0.41
PVT1-220ENST00000524165 BABAM2Q9NXR7 383 aa12.49□□□□□ -0.41
PVT1-220ENST00000524165 TBC1D24Q9ULP9 559 aa12.49□□□□□ -0.41
PVT1-220ENST00000524165 OR2T8A6NH00 312 aa12.48□□□□□ -0.41
PVT1-220ENST00000524165 CD3GP09693 182 aa12.48□□□□□ -0.41
PVT1-220ENST00000524165 SPP1P10451 314 aa12.48□□□□□ -0.41
PVT1-220ENST00000524165 PAFAH1B2P68402 229 aa12.48□□□□□ -0.41
PVT1-220ENST00000524165 UNC119Q13432 240 aa12.48□□□□□ -0.41
PVT1-220ENST00000524165 FAM90A2PQ658T7 463 aa12.48□□□□□ -0.41
PVT1-220ENST00000524165 VKORC1L1Q8N0U8 176 aa12.48□□□□□ -0.41
PVT1-220ENST00000524165 PUSL1Q8N0Z8 303 aaKnown RBP12.48□□□□□ -0.41
PVT1-220ENST00000524165 OR10J5Q8NHC4 309 aa12.48□□□□□ -0.41
PVT1-220ENST00000524165 Q96MT0 163 aa12.48□□□□□ -0.41
PVT1-220ENST00000524165 CABLES2Q9BTV7 478 aa12.48□□□□□ -0.41
PVT1-220ENST00000524165 HSF4Q9ULV5 492 aa12.48□□□□□ -0.41
PVT1-220ENST00000524165 RBM7Q9Y580 266 aaKnown RBP12.48□□□□□ -0.41
PVT1-220ENST00000524165 IGKV3-7A0A075B6H7 116 aa12.47□□□□□ -0.41
PVT1-220ENST00000524165 IGHV3OR16-8A0A075B7F1 116 aa12.47□□□□□ -0.41
PVT1-220ENST00000524165 TRBV6-7A0A0A0MS04 114 aa12.47□□□□□ -0.41
PVT1-220ENST00000524165 A0A0A6YYD4 124 aa12.47□□□□□ -0.41
PVT1-220ENST00000524165 IGHV7-4-1A0A0J9YVY3 117 aa12.47□□□□□ -0.41
PVT1-220ENST00000524165 BET1O15155 118 aa12.47□□□□□ -0.41
PVT1-220ENST00000524165 FCGR3BO75015 233 aa12.47□□□□□ -0.41
PVT1-220ENST00000524165 DIRAS3O95661 229 aa12.47□□□□□ -0.41
PVT1-220ENST00000524165 CELP19835 753 aa12.47□□□□□ -0.41
PVT1-220ENST00000524165 GYS2P54840 703 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms