RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 SLC2A8Q9NY64 477 aa6.77□□□□□ -1.33
CTNNA1-240ENST00000523912 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 TRBV9A0A0B4J1U6 114 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 IGKV1D-13A0A0B4J2D9 117 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 NPIPB5A8MRT5 1133 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 CYB5BO43169 146 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 SSX5O60225 188 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 OR2J3O76001 311 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 TRBV12-3P01733 135 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 PRH1P02810 166 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 IFNA6P05013 189 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 CSN3P07498 182 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 IGKV1-13P0DP09 117 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 DEFA4P12838 97 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 HIST1H1BP16401 226 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 FCGR2CP31995 323 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 HERV-K104P61576 105 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 RPL8P62917 257 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 MRGPRG-AS1Q2M3A8 158 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 C10orf55Q5SWW7 151 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 HOGA1Q86XE5 327 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 LAX1Q8IWV1 398 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 VKORC1L1Q8N0U8 176 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 MFSD4AQ8N468 514 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 TMEM167AQ8TBQ9 72 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 CD300LFQ8TDQ1 290 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 SECTM1Q8WVN6 248 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 EEF1AKMT3Q96AZ1 226 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 CITED4Q96RK1 184 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 HRASLSQ9HDD0 168 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 IFT46Q9NQC8 304 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 DNAH7Q8WXX0 4024 aa6.76□□□□□ -1.33
CTNNA1-240ENST00000523912 BMPR1BO00238 502 aa6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 RBFOX2O43251 390 aaKnown RBP eCLIP6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 TNFSF12O43508 249 aa6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 GGCTO75223 188 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 TPPPO94811 219 aa6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 PPYP01298 95 aa6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 IGLV2-14P01704 120 aa6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 HLA-GP17693 338 aa6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 TAS2R31P59538 309 aa6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 ERVK-16P61578 105 aa6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 RPL30P62888 115 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 ZNF45Q02386 682 aa6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 IL34Q6ZMJ4 242 aa6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 SSX9Q7RTT3 188 aa6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 SPAG16Q8N0X2 631 aa6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 PUSL1Q8N0Z8 303 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 SLC25A38Q96DW6 304 aa6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 TM2D3Q9BRN9 247 aa6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 SLC5A7Q9GZV3 580 aa6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 AUNIPQ9H7T9 357 aa6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 SLC2A9Q9NRM0 540 aa6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 C19orf73Q9NVV2 129 aa6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 TECRQ9NZ01 308 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 FBXL7Q9UJT9 491 aa6.75□□□□□ -1.33
CTNNA1-240ENST00000523912 LCE6AA0A183 80 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 HMX3A6NHT5 357 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 TEX22C9J3V5 150 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 CLEC2LP0C7M8 214 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 ZNF735P0CB33 412 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 NQO2P16083 231 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 PSMB6P28072 239 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 ARL3P36405 182 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 FXYD4P59646 89 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 CD81P60033 236 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 EIF4EBP1Q13541 118 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 CD300EQ496F6 205 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 FAM106AQ4KMX7 169 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 UBE2NLQ5JXB2 153 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 TMEM69Q5SWH9 247 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 AADACL3Q5VUY0 350 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 THOC7Q6I9Y2 204 aaKnown RBP6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 TMEM17Q86X19 198 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 Q8N1Y9 231 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 OR5H6Q8NGV6 325 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 YIPF6Q96EC8 236 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 S100A16Q96FQ6 103 aaKnown RBP6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 CXorf58Q96LI9 332 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 SRSF8Q9BRL6 282 aaKnown RBP6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 COMMD5Q9GZQ3 224 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 BET1LQ9NYM9 111 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 COMMD9Q9P000 198 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 THYN1Q9P016 225 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 TENM2Q9NT68 2774 aa6.74□□□□□ -1.33
CTNNA1-240ENST00000523912 TRBV7-1A0A0A6YYK4 115 aa6.73□□□□□ -1.33
CTNNA1-240ENST00000523912 C2orf70A6NJV1 201 aa6.73□□□□□ -1.33
CTNNA1-240ENST00000523912 PPP5D1E7EU14 171 aa6.73□□□□□ -1.33
CTNNA1-240ENST00000523912 LGALS9O00182 355 aa6.73□□□□□ -1.33
CTNNA1-240ENST00000523912 SULT1C2O00338 296 aa6.73□□□□□ -1.33
CTNNA1-240ENST00000523912 XRCC3O43542 346 aa6.73□□□□□ -1.33
CTNNA1-240ENST00000523912 RBMXL2O75526 392 aaKnown RBP6.73□□□□□ -1.33
CTNNA1-240ENST00000523912 GABARAPO95166 117 aa6.73□□□□□ -1.33
CTNNA1-240ENST00000523912 HPRT1P00492 218 aa6.73□□□□□ -1.33
CTNNA1-240ENST00000523912 CRYGCP07315 174 aa6.73□□□□□ -1.33
CTNNA1-240ENST00000523912 IL6RP08887 468 aaPredicted RBP6.73□□□□□ -1.33
CTNNA1-240ENST00000523912 FGF2P09038 288 aa6.73□□□□□ -1.33
CTNNA1-240ENST00000523912 S100GP29377 79 aa6.73□□□□□ -1.33
CTNNA1-240ENST00000523912 ALDH3B2P48448 385 aa6.73□□□□□ -1.33
CTNNA1-240ENST00000523912 TAS2R46P59540 309 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms