RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 HERV-K104P61576 105 aa7.32□□□□□ -1.24
PABPC1-222ENST00000523555 AADACL3Q5VUY0 350 aa7.32□□□□□ -1.24
PABPC1-222ENST00000523555 OR4A47Q6IF82 309 aa7.32□□□□□ -1.24
PABPC1-222ENST00000523555 MZT2AQ6P582 158 aa7.32□□□□□ -1.24
PABPC1-222ENST00000523555 REC114Q7Z4M0 266 aa7.32□□□□□ -1.24
PABPC1-222ENST00000523555 HAPLN4Q86UW8 402 aa7.32□□□□□ -1.24
PABPC1-222ENST00000523555 MMD2Q8IY49 270 aa7.32□□□□□ -1.24
PABPC1-222ENST00000523555 ZBTB34Q8NCN2 500 aa7.32□□□□□ -1.24
PABPC1-222ENST00000523555 OR52I2Q8NH67 350 aa7.32□□□□□ -1.24
PABPC1-222ENST00000523555 DYNC2LI1Q8TCX1 351 aa7.32□□□□□ -1.24
PABPC1-222ENST00000523555 DPF1Q92782 380 aa7.32□□□□□ -1.24
PABPC1-222ENST00000523555 OR2A7Q96R45 310 aa7.32□□□□□ -1.24
PABPC1-222ENST00000523555 PRR25Q96S07 402 aa7.32□□□□□ -1.24
PABPC1-222ENST00000523555 MCRIP2Q9BUT9 160 aaKnown RBP7.32□□□□□ -1.24
PABPC1-222ENST00000523555 TINAGL1Q9GZM7 467 aaPredicted RBP7.32□□□□□ -1.24
PABPC1-222ENST00000523555 SLA2Q9H6Q3 261 aa7.32□□□□□ -1.24
PABPC1-222ENST00000523555 SORL1Q92673 2214 aa7.31□□□□□ -1.24
PABPC1-222ENST00000523555 SMIM31A0A1B0GVY4 71 aa7.31□□□□□ -1.24
PABPC1-222ENST00000523555 H3BMQ9 156 aa7.31□□□□□ -1.24
PABPC1-222ENST00000523555 H3BUA1 57 aa7.31□□□□□ -1.24
PABPC1-222ENST00000523555 OVOL1O14753 267 aa7.31□□□□□ -1.24
PABPC1-222ENST00000523555 HSPB1P04792 205 aaKnown RBP7.31□□□□□ -1.24
PABPC1-222ENST00000523555 OR9G9P0C7N8 305 aa7.31□□□□□ -1.24
PABPC1-222ENST00000523555 AREGP15514 252 aa7.31□□□□□ -1.24
PABPC1-222ENST00000523555 RCVRNP35243 200 aa7.31□□□□□ -1.24
PABPC1-222ENST00000523555 KIR2DS2P43631 304 aa7.31□□□□□ -1.24
PABPC1-222ENST00000523555 DGCR2P98153 550 aa7.31□□□□□ -1.24
PABPC1-222ENST00000523555 ZNF585BQ52M93 769 aa7.31□□□□□ -1.24
PABPC1-222ENST00000523555 PHLDA2Q53GA4 152 aa7.31□□□□□ -1.24
PABPC1-222ENST00000523555 C9orf66Q5T8R8 295 aa7.31□□□□□ -1.24
PABPC1-222ENST00000523555 OR4D10Q8NGI6 311 aa7.31□□□□□ -1.24
PABPC1-222ENST00000523555 AP3S1Q92572 193 aa7.31□□□□□ -1.24
PABPC1-222ENST00000523555 FYTTD1Q96QD9 318 aaKnown RBP7.31□□□□□ -1.24
PABPC1-222ENST00000523555 SCPEP1Q9HB40 452 aa7.31□□□□□ -1.24
PABPC1-222ENST00000523555 AKIP1Q9NQ31 210 aa7.31□□□□□ -1.24
PABPC1-222ENST00000523555 BET1LQ9NYM9 111 aa7.31□□□□□ -1.24
PABPC1-222ENST00000523555 TRBV9A0A0B4J1U6 114 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 C13orf42A0A1B0GVH6 325 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 MPPED1O15442 326 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 RGS5O15539 181 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 RBFOX2O43251 390 aaKnown RBP eCLIP7.3□□□□□ -1.243e-11■■□□□ 11.8
PABPC1-222ENST00000523555 BRI3O95415 125 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 HPRT1P00492 218 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 CD3DP04234 171 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 REG1AP05451 166 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 ZNF735P0CB33 412 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 ECI1P42126 302 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 RPL27AP46776 148 aaKnown RBP7.3□□□□□ -1.24
PABPC1-222ENST00000523555 RPL5P46777 297 aaKnown RBP7.3□□□□□ -1.24
PABPC1-222ENST00000523555 CATR1Q13166 79 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 POU2AF1Q16633 256 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 FAAP20Q6NZ36 180 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 TTC9CQ8N5M4 171 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 OR6F1Q8NGZ6 308 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 RAB2BQ8WUD1 216 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 FCAMRQ8WWV6 532 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 ISOC1Q96CN7 298 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 TMEM68Q96MH6 324 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 RSRP1Q9BUV0 290 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 SLIRPQ9GZT3 109 aaKnown RBP7.3□□□□□ -1.24
PABPC1-222ENST00000523555 TMEM140Q9NV12 185 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 CEPT1Q9Y6K0 416 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 S4R3C0 116 aa7.3□□□□□ -1.24
PABPC1-222ENST00000523555 DBX1A6NMT0 343 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 GPR31O00270 319 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 UPK2O00526 184 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 SAP30O75446 220 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 OR2J3O76001 311 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 ACTL6BO94805 426 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 HRASP01112 189 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 IGKV1-39P01597 117 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 IGHV3-23P01764 117 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 IGKV1D-39P04432 117 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 NQO2P16083 231 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 HLA-GP17693 338 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 PI3P19957 117 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 EDN2P20800 178 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 F2RP25116 425 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 CD40LGP29965 261 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 G6PCP35575 357 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 LPAR6P43657 344 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 TMBIM6P55061 237 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 TAS2R31P59538 309 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 TSPAN5P62079 268 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 RPL8P62917 257 aaKnown RBP7.29□□□□□ -1.24
PABPC1-222ENST00000523555 RHOGP84095 191 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 DEFB121Q5J5C9 76 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 VAX1Q5SQQ9 334 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 ZNF343Q6P1L6 599 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 ACSM6Q6P461 480 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 TBC1D26Q86UD7 250 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 LHFPL1Q86WI0 220 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 VSTM2AQ8TAG5 236 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 MRGPRFQ96AM1 343 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 FANCD2OSQ96PS1 177 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 SPIN2AQ99865 258 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 SPIN2BQ9BPZ2 258 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 GPR61Q9BZJ8 451 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 PLEKHA2Q9HB19 425 aa7.29□□□□□ -1.24
PABPC1-222ENST00000523555 HRASLSQ9HDD0 168 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms