RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 OR5H2Q8NGV7 314 aa13.28□□□□□ -0.28
CCNC-213ENST00000523541 OR6F1Q8NGZ6 308 aa13.28□□□□□ -0.28
CCNC-213ENST00000523541 GPX8Q8TED1 209 aa13.28□□□□□ -0.28
CCNC-213ENST00000523541 C15orf40Q8WUR7 153 aa13.28□□□□□ -0.28
CCNC-213ENST00000523541 MRPS26Q9BYN8 205 aaKnown RBP13.28□□□□□ -0.28
CCNC-213ENST00000523541 EHFQ9NZC4 300 aa13.28□□□□□ -0.28
CCNC-213ENST00000523541 PEF1Q9UBV8 284 aaKnown RBP13.28□□□□□ -0.28
CCNC-213ENST00000523541 TRBV9A0A0B4J1U6 114 aa13.27□□□□□ -0.29
CCNC-213ENST00000523541 SMIM18P0DKX4 95 aa13.27□□□□□ -0.29
CCNC-213ENST00000523541 NQO2P16083 231 aa13.27□□□□□ -0.29
CCNC-213ENST00000523541 ZNF182P17025 639 aaPredicted RBP13.27□□□□□ -0.29
CCNC-213ENST00000523541 GNRHRP30968 328 aa13.27□□□□□ -0.29
CCNC-213ENST00000523541 RFX2P48378 723 aa13.27□□□□□ -0.29
CCNC-213ENST00000523541 FXYD4P59646 89 aa13.27□□□□□ -0.29
CCNC-213ENST00000523541 CTF1Q16619 201 aa13.27□□□□□ -0.29
CCNC-213ENST00000523541 OR2B11Q5JQS5 317 aa13.27□□□□□ -0.29
CCNC-213ENST00000523541 LPCAT3Q6P1A2 487 aa13.27□□□□□ -0.29
CCNC-213ENST00000523541 ZNF818PQ6ZRF7 136 aa13.27□□□□□ -0.29
CCNC-213ENST00000523541 LYSMD2Q8IV50 215 aa13.27□□□□□ -0.29
CCNC-213ENST00000523541 CMTM1Q8IZ96 169 aa13.27□□□□□ -0.29
CCNC-213ENST00000523541 OR6Q1Q8NGQ2 317 aa13.27□□□□□ -0.29
CCNC-213ENST00000523541 MOB3AQ96BX8 217 aa13.27□□□□□ -0.29
CCNC-213ENST00000523541 OR4C12Q96R67 309 aa13.27□□□□□ -0.29
CCNC-213ENST00000523541 PLEKHA2Q9HB19 425 aa13.27□□□□□ -0.29
CCNC-213ENST00000523541 ZNF257Q9Y2Q1 563 aa13.27□□□□□ -0.29
CCNC-213ENST00000523541 LSM4Q9Y4Z0 139 aaKnown RBP13.27□□□□□ -0.29
CCNC-213ENST00000523541 DNAH9Q9NYC9 4486 aa13.26□□□□□ -0.29
CCNC-213ENST00000523541 MEIS3P1A6NDR6 274 aa13.26□□□□□ -0.29
CCNC-213ENST00000523541 NPIPB5A8MRT5 1133 aa13.26□□□□□ -0.29
CCNC-213ENST00000523541 DHFRP00374 187 aa13.26□□□□□ -0.29
CCNC-213ENST00000523541 EIF4EP06730 217 aaKnown RBP13.26□□□□□ -0.29
CCNC-213ENST00000523541 ZNF735P0CB33 412 aa13.26□□□□□ -0.29
CCNC-213ENST00000523541 NHLRC4P0CG21 123 aaPredicted RBP13.26□□□□□ -0.29
CCNC-213ENST00000523541 APELAP0DMC3 54 aa13.26□□□□□ -0.29
CCNC-213ENST00000523541 TNCP24821 2201 aa13.26□□□□□ -0.29
CCNC-213ENST00000523541 RPL27AP46776 148 aaKnown RBP13.26□□□□□ -0.29
CCNC-213ENST00000523541 RPL8P62917 257 aaKnown RBP13.26□□□□□ -0.29
CCNC-213ENST00000523541 KLF5Q13887 457 aaPredicted RBP13.26□□□□□ -0.29
CCNC-213ENST00000523541 VKORC1L1Q8N0U8 176 aa13.26□□□□□ -0.29
CCNC-213ENST00000523541 NECAP1Q8NC96 275 aa13.26□□□□□ -0.29
CCNC-213ENST00000523541 SRSF8Q9BRL6 282 aaKnown RBP13.26□□□□□ -0.29
CCNC-213ENST00000523541 ZNF2Q9BSG1 426 aaPredicted RBP13.26□□□□□ -0.29
CCNC-213ENST00000523541 SLC2A9Q9NRM0 540 aa13.26□□□□□ -0.29
CCNC-213ENST00000523541 ANKRD34BA5PLL1 514 aa13.25□□□□□ -0.29
CCNC-213ENST00000523541 TNFSF12O43508 249 aa13.25□□□□□ -0.29
CCNC-213ENST00000523541 PMP2P02689 132 aa13.25□□□□□ -0.29
CCNC-213ENST00000523541 CRYGCP07315 174 aa13.25□□□□□ -0.29
CCNC-213ENST00000523541 IL6RP08887 468 aaPredicted RBP13.25□□□□□ -0.29
CCNC-213ENST00000523541 ELK1P19419 428 aa13.25□□□□□ -0.29
CCNC-213ENST00000523541 ATP5G2Q06055 141 aa13.25□□□□□ -0.29
CCNC-213ENST00000523541 KLK9Q2XQG4 91 aa13.25□□□□□ -0.29
CCNC-213ENST00000523541 GPR107Q5VW38 600 aa13.25□□□□□ -0.29
CCNC-213ENST00000523541 FAM212BQ9NTI7 297 aaPredicted RBP13.25□□□□□ -0.29
CCNC-213ENST00000523541 COMMD9Q9P000 198 aa13.25□□□□□ -0.29
CCNC-213ENST00000523541 KLK9Q9UKQ9 250 aa13.25□□□□□ -0.29
CCNC-213ENST00000523541 DPPA5A6NC42 116 aa13.24□□□□□ -0.29
CCNC-213ENST00000523541 FCER2P06734 321 aa13.24□□□□□ -0.29
CCNC-213ENST00000523541 HLA-GP17693 338 aa13.24□□□□□ -0.29
CCNC-213ENST00000523541 F2RP25116 425 aa13.24□□□□□ -0.29
CCNC-213ENST00000523541 S100GP29377 79 aa13.24□□□□□ -0.29
CCNC-213ENST00000523541 RCVRNP35243 200 aa13.24□□□□□ -0.29
CCNC-213ENST00000523541 ALDH3B2P48448 385 aa13.24□□□□□ -0.29
CCNC-213ENST00000523541 RHOGP84095 191 aa13.24□□□□□ -0.29
CCNC-213ENST00000523541 AADACL3Q5VUY0 350 aa13.24□□□□□ -0.29
CCNC-213ENST00000523541 OR4A47Q6IF82 309 aa13.24□□□□□ -0.29
CCNC-213ENST00000523541 GPR141Q7Z602 305 aa13.24□□□□□ -0.29
CCNC-213ENST00000523541 TMEM17Q86X19 198 aa13.24□□□□□ -0.29
CCNC-213ENST00000523541 RSRP1Q9BUV0 290 aa13.24□□□□□ -0.29
CCNC-213ENST00000523541 SIGLEC8Q9NYZ4 499 aa13.24□□□□□ -0.29
CCNC-213ENST00000523541 TEX22C9J3V5 150 aa13.23□□□□□ -0.29
CCNC-213ENST00000523541 HPGDSO60760 199 aa13.23□□□□□ -0.29
CCNC-213ENST00000523541 PGLYRP1O75594 196 aaPredicted RBP13.23□□□□□ -0.29
CCNC-213ENST00000523541 HIST1H1BP16401 226 aaKnown RBP13.23□□□□□ -0.29
CCNC-213ENST00000523541 HRH1P35367 487 aa13.23□□□□□ -0.29
CCNC-213ENST00000523541 UCP3P55916 312 aa13.23□□□□□ -0.29
CCNC-213ENST00000523541 TSPAN5P62079 268 aa13.23□□□□□ -0.29
CCNC-213ENST00000523541 THOC7Q6I9Y2 204 aaKnown RBP13.23□□□□□ -0.29
CCNC-213ENST00000523541 BCL7BQ9BQE9 202 aa13.23□□□□□ -0.29
CCNC-213ENST00000523541 AKIP1Q9NQ31 210 aa13.23□□□□□ -0.29
CCNC-213ENST00000523541 GPR31O00270 319 aa13.22□□□□□ -0.29
CCNC-213ENST00000523541 UPK2O00526 184 aa13.22□□□□□ -0.29
CCNC-213ENST00000523541 HLA-DMAP28067 261 aa13.22□□□□□ -0.29
CCNC-213ENST00000523541 DEFA5Q01523 94 aa13.22□□□□□ -0.29
CCNC-213ENST00000523541 SSX9Q7RTT3 188 aa13.22□□□□□ -0.29
CCNC-213ENST00000523541 HSD17B13Q7Z5P4 300 aaPredicted RBP13.22□□□□□ -0.29
CCNC-213ENST00000523541 OR9G4Q8NGQ1 327 aa13.22□□□□□ -0.29
CCNC-213ENST00000523541 DGCR14Q96DF8 476 aaKnown RBP13.22□□□□□ -0.29
CCNC-213ENST00000523541 GPHA2Q96T91 129 aa13.22□□□□□ -0.29
CCNC-213ENST00000523541 ASCL2Q99929 193 aa13.22□□□□□ -0.29
CCNC-213ENST00000523541 HRASLSQ9HDD0 168 aa13.22□□□□□ -0.29
CCNC-213ENST00000523541 SMAD5-AS1Q9Y6J3 95 aa13.22□□□□□ -0.29
CCNC-213ENST00000523541 COL7A1Q02388 2944 aa13.22□□□□□ -0.29
CCNC-213ENST00000523541 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.21□□□□□ -0.29
CCNC-213ENST00000523541 FAM25AB3EWG3 89 aa13.21□□□□□ -0.29
CCNC-213ENST00000523541 FAM25CB3EWG5 89 aa13.21□□□□□ -0.29
CCNC-213ENST00000523541 FAM25GB3EWG6 89 aa13.21□□□□□ -0.29
CCNC-213ENST00000523541 IGLV1-51P01701 117 aa13.21□□□□□ -0.29
CCNC-213ENST00000523541 TBPP20226 339 aa13.21□□□□□ -0.29
CCNC-213ENST00000523541 PSMB6P28072 239 aa13.21□□□□□ -0.29
CCNC-213ENST00000523541 ERVK-16P61578 105 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms