RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 ARL3P36405 182 aa11.61□□□□□ -0.55
MRPS28-209ENST00000522987 RPL27AP46776 148 aaKnown RBP11.61□□□□□ -0.55
MRPS28-209ENST00000522987 TBCEQ15813 527 aaPredicted RBP11.61□□□□□ -0.55
MRPS28-209ENST00000522987 OR2K2Q8NGT1 345 aa11.61□□□□□ -0.55
MRPS28-209ENST00000522987 OR51E2Q9H255 320 aa11.61□□□□□ -0.55
MRPS28-209ENST00000522987 MRPS7Q9Y2R9 242 aaKnown RBP11.61□□□□□ -0.55
MRPS28-209ENST00000522987 OR2W1Q9Y3N9 320 aa11.61□□□□□ -0.55
MRPS28-209ENST00000522987 CREBL2O60519 120 aaPredicted RBP11.6□□□□□ -0.55
MRPS28-209ENST00000522987 GGCTO75223 188 aaKnown RBP11.6□□□□□ -0.55
MRPS28-209ENST00000522987 SCAF4O95104 1147 aaKnown RBP11.6□□□□□ -0.55
MRPS28-209ENST00000522987 DIRAS3O95661 229 aa11.6□□□□□ -0.55
MRPS28-209ENST00000522987 IGLV2-14P01704 120 aa11.6□□□□□ -0.55
MRPS28-209ENST00000522987 DTYMKP23919 212 aa11.6□□□□□ -0.55
MRPS28-209ENST00000522987 RANBP1P43487 201 aa11.6□□□□□ -0.55
MRPS28-209ENST00000522987 KCTD12Q96CX2 325 aaKnown RBP11.6□□□□□ -0.55
MRPS28-209ENST00000522987 CCDC140Q96MF4 163 aa11.6□□□□□ -0.55
MRPS28-209ENST00000522987 NDUFB11Q9NX14 153 aa11.6□□□□□ -0.55
MRPS28-209ENST00000522987 IGHV3-35A0A0C4DH35 117 aa11.59□□□□□ -0.55
MRPS28-209ENST00000522987 TRDV1A0A1B0GX56 115 aa11.59□□□□□ -0.55
MRPS28-209ENST00000522987 SSX5O60225 188 aa11.59□□□□□ -0.55
MRPS28-209ENST00000522987 KBTBD11O94819 623 aa11.59□□□□□ -0.55
MRPS28-209ENST00000522987 HLA-DQB1P01920 261 aa11.59□□□□□ -0.55
MRPS28-209ENST00000522987 CD36P16671 472 aa11.59□□□□□ -0.55
MRPS28-209ENST00000522987 KIR2DS2P43631 304 aa11.59□□□□□ -0.55
MRPS28-209ENST00000522987 BRWD1-AS2P59051 145 aa11.59□□□□□ -0.55
MRPS28-209ENST00000522987 HACD4Q5VWC8 232 aa11.59□□□□□ -0.55
MRPS28-209ENST00000522987 IZUMO2Q6UXV1 221 aa11.59□□□□□ -0.55
MRPS28-209ENST00000522987 Q6ZS49 121 aa11.59□□□□□ -0.55
MRPS28-209ENST00000522987 SLC25A42Q86VD7 318 aa11.59□□□□□ -0.55
MRPS28-209ENST00000522987 TMEM61Q8N0U2 210 aa11.59□□□□□ -0.55
MRPS28-209ENST00000522987 OR4S2Q8NH73 311 aa11.59□□□□□ -0.55
MRPS28-209ENST00000522987 FANCD2OSQ96PS1 177 aa11.59□□□□□ -0.55
MRPS28-209ENST00000522987 OR2A7Q96R45 310 aa11.59□□□□□ -0.55
MRPS28-209ENST00000522987 MLXQ9UH92 298 aa11.59□□□□□ -0.55
MRPS28-209ENST00000522987 ZNF257Q9Y2Q1 563 aa11.59□□□□□ -0.55
MRPS28-209ENST00000522987 MFSD2BA6NFX1 497 aa11.58□□□□□ -0.56
MRPS28-209ENST00000522987 CBLN1P23435 193 aa11.58□□□□□ -0.56
MRPS28-209ENST00000522987 GNG2P59768 71 aa11.58□□□□□ -0.56
MRPS28-209ENST00000522987 BTNL8Q6UX41 500 aa11.58□□□□□ -0.56
MRPS28-209ENST00000522987 LAX1Q8IWV1 398 aa11.58□□□□□ -0.56
MRPS28-209ENST00000522987 MFSD4AQ8N468 514 aa11.58□□□□□ -0.56
MRPS28-209ENST00000522987 TMEM167AQ8TBQ9 72 aa11.58□□□□□ -0.56
MRPS28-209ENST00000522987 LGALS14Q8TCE9 139 aa11.58□□□□□ -0.56
MRPS28-209ENST00000522987 SECTM1Q8WVN6 248 aa11.58□□□□□ -0.56
MRPS28-209ENST00000522987 DAPK2Q9UIK4 370 aa11.58□□□□□ -0.56
MRPS28-209ENST00000522987 TMEM213A2RRL7 107 aa11.57□□□□□ -0.56
MRPS28-209ENST00000522987 RPA2P15927 270 aa11.57□□□□□ -0.56
MRPS28-209ENST00000522987 PSMB6P28072 239 aa11.57□□□□□ -0.56
MRPS28-209ENST00000522987 PMS2P11Q13670 270 aa11.57□□□□□ -0.56
MRPS28-209ENST00000522987 TM4SF20Q53R12 229 aa11.57□□□□□ -0.56
MRPS28-209ENST00000522987 ZNF57Q68EA5 555 aaPredicted RBP11.57□□□□□ -0.56
MRPS28-209ENST00000522987 CNIH2Q6PI25 160 aa11.57□□□□□ -0.56
MRPS28-209ENST00000522987 PUSL1Q8N0Z8 303 aaKnown RBP11.57□□□□□ -0.56
MRPS28-209ENST00000522987 UXS1Q8NBZ7 420 aa11.57□□□□□ -0.56
MRPS28-209ENST00000522987 OR52B4Q8NGK2 314 aa11.57□□□□□ -0.56
MRPS28-209ENST00000522987 CCL28Q9NRJ3 127 aa11.57□□□□□ -0.56
MRPS28-209ENST00000522987 SLC2A9Q9NRM0 540 aa11.57□□□□□ -0.56
MRPS28-209ENST00000522987 PLECQ15149 4684 aaKnown RBP11.57□□□□□ -0.56
MRPS28-209ENST00000522987 ALMS1Q8TCU4 4167 aa11.57□□□□□ -0.56
MRPS28-209ENST00000522987 TRAV3A0A0B4J244 114 aa11.56□□□□□ -0.56
MRPS28-209ENST00000522987 CGB1A6NKQ9 187 aa11.56□□□□□ -0.56
MRPS28-209ENST00000522987 NPIPB5A8MRT5 1133 aa11.56□□□□□ -0.56
MRPS28-209ENST00000522987 CTXN2P0C2S0 81 aa11.56□□□□□ -0.56
MRPS28-209ENST00000522987 ZNF735P0CB33 412 aa11.56□□□□□ -0.56
MRPS28-209ENST00000522987 DEFA4P12838 97 aa11.56□□□□□ -0.56
MRPS28-209ENST00000522987 PSMB9P28065 219 aa11.56□□□□□ -0.56
MRPS28-209ENST00000522987 EIF4EBP1Q13541 118 aaPredicted RBP11.56□□□□□ -0.56
MRPS28-209ENST00000522987 UNQ9165/PRO28630Q6UXU0 137 aa11.56□□□□□ -0.56
MRPS28-209ENST00000522987 SLC16A13Q7RTY0 426 aa11.56□□□□□ -0.56
MRPS28-209ENST00000522987 GVQW1Q8N7I0 195 aa11.56□□□□□ -0.56
MRPS28-209ENST00000522987 IL17DQ8TAD2 202 aa11.56□□□□□ -0.56
MRPS28-209ENST00000522987 EEF1AKMT3Q96AZ1 226 aa11.56□□□□□ -0.56
MRPS28-209ENST00000522987 HSD17B10Q99714 261 aaKnown RBP11.56□□□□□ -0.56
MRPS28-209ENST00000522987 HRASLSQ9HDD0 168 aa11.56□□□□□ -0.56
MRPS28-209ENST00000522987 TXNL4BQ9NX01 149 aaKnown RBP11.56□□□□□ -0.56
MRPS28-209ENST00000522987 TECRQ9NZ01 308 aaKnown RBP11.56□□□□□ -0.56
MRPS28-209ENST00000522987 ANXA10Q9UJ72 324 aa11.56□□□□□ -0.56
MRPS28-209ENST00000522987 RRP15Q9Y3B9 282 aaKnown RBP11.56□□□□□ -0.56
MRPS28-209ENST00000522987 NOTOA8MTQ0 251 aa11.55□□□□□ -0.56
MRPS28-209ENST00000522987 LGALS9O00182 355 aa11.55□□□□□ -0.56
MRPS28-209ENST00000522987 CLEC2LP0C7M8 214 aa11.55□□□□□ -0.56
MRPS28-209ENST00000522987 GPR183P32249 361 aa11.55□□□□□ -0.56
MRPS28-209ENST00000522987 FXYD4P59646 89 aa11.55□□□□□ -0.56
MRPS28-209ENST00000522987 RPL8P62917 257 aaKnown RBP11.55□□□□□ -0.56
MRPS28-209ENST00000522987 MXD1Q05195 221 aa11.55□□□□□ -0.56
MRPS28-209ENST00000522987 OR4A47Q6IF82 309 aa11.55□□□□□ -0.56
MRPS28-209ENST00000522987 GPHB5Q86YW7 130 aa11.55□□□□□ -0.56
MRPS28-209ENST00000522987 VSTM2AQ8TAG5 236 aa11.55□□□□□ -0.56
MRPS28-209ENST00000522987 UBQLN2Q9UHD9 624 aa11.55□□□□□ -0.56
MRPS28-209ENST00000522987 BLOC1S6Q9UL45 172 aa11.55□□□□□ -0.56
MRPS28-209ENST00000522987 SULT1C2O00338 296 aa11.54□□□□□ -0.56
MRPS28-209ENST00000522987 CLEC3BP05452 202 aa11.54□□□□□ -0.56
MRPS28-209ENST00000522987 CTRB1P17538 263 aa11.54□□□□□ -0.56
MRPS28-209ENST00000522987 HLA-GP17693 338 aa11.54□□□□□ -0.56
MRPS28-209ENST00000522987 FCGR2CP31995 323 aa11.54□□□□□ -0.56
MRPS28-209ENST00000522987 ARPC4P59998 168 aa11.54□□□□□ -0.56
MRPS28-209ENST00000522987 ARL6IP1Q15041 203 aa11.54□□□□□ -0.56
MRPS28-209ENST00000522987 TIMM50Q3ZCQ8 353 aa11.54□□□□□ -0.56
MRPS28-209ENST00000522987 FAM106AQ4KMX7 169 aa11.54□□□□□ -0.56
MRPS28-209ENST00000522987 ZNF585BQ52M93 769 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms