RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 SLC25A42Q86VD7 318 aa15.75■□□□□ 0.11
SDCBP-209ENST00000522243 SGPP2Q8IWX5 399 aa15.75■□□□□ 0.11
SDCBP-209ENST00000522243 SPAG16Q8N0X2 631 aa15.75■□□□□ 0.11
SDCBP-209ENST00000522243 ZNF257Q9Y2Q1 563 aa15.75■□□□□ 0.11
SDCBP-209ENST00000522243 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.74■□□□□ 0.11
SDCBP-209ENST00000522243 IZUMO1RA6ND01 250 aa15.74■□□□□ 0.11
SDCBP-209ENST00000522243 H0Y980 276 aa15.74■□□□□ 0.11
SDCBP-209ENST00000522243 SULT1C2O00338 296 aa15.74■□□□□ 0.11
SDCBP-209ENST00000522243 AIREO43918 545 aa15.74■□□□□ 0.11
SDCBP-209ENST00000522243 HRASP01112 189 aa15.74■□□□□ 0.11
SDCBP-209ENST00000522243 AREGP15514 252 aa15.74■□□□□ 0.11
SDCBP-209ENST00000522243 RPS19P39019 145 aaKnown RBP15.74■□□□□ 0.11
SDCBP-209ENST00000522243 KIR2DS2P43631 304 aa15.74■□□□□ 0.11
SDCBP-209ENST00000522243 C15orf32Q32M92 178 aa15.74■□□□□ 0.11
SDCBP-209ENST00000522243 TIMM50Q3ZCQ8 353 aa15.74■□□□□ 0.11
SDCBP-209ENST00000522243 TMEM17Q86X19 198 aa15.74■□□□□ 0.11
SDCBP-209ENST00000522243 NECAP1Q8NC96 275 aa15.74■□□□□ 0.11
SDCBP-209ENST00000522243 ZMAT4Q9H898 229 aa15.74■□□□□ 0.11
SDCBP-209ENST00000522243 PEMTQ9UBM1 199 aa15.74■□□□□ 0.11
SDCBP-209ENST00000522243 FBXL7Q9UJT9 491 aa15.74■□□□□ 0.11
SDCBP-209ENST00000522243 S4R3C0 116 aa15.74■□□□□ 0.11
SDCBP-209ENST00000522243 PPP5D1E7EU14 171 aa15.73■□□□□ 0.11
SDCBP-209ENST00000522243 IGHV3-23P01764 117 aa15.73■□□□□ 0.11
SDCBP-209ENST00000522243 ZNF735P0CB33 412 aa15.73■□□□□ 0.11
SDCBP-209ENST00000522243 MAS1LP35410 378 aa15.73■□□□□ 0.11
SDCBP-209ENST00000522243 CBX5P45973 191 aa15.73■□□□□ 0.11
SDCBP-209ENST00000522243 OR4A47Q6IF82 309 aa15.73■□□□□ 0.11
SDCBP-209ENST00000522243 ZBTB34Q8NCN2 500 aa15.73■□□□□ 0.11
SDCBP-209ENST00000522243 OR5AP2Q8NGF4 316 aa15.73■□□□□ 0.11
SDCBP-209ENST00000522243 YIPF6Q96EC8 236 aa15.73■□□□□ 0.11
SDCBP-209ENST00000522243 S100A16Q96FQ6 103 aaKnown RBP15.73■□□□□ 0.11
SDCBP-209ENST00000522243 HRASLSQ9HDD0 168 aa15.73■□□□□ 0.11
SDCBP-209ENST00000522243 IFT46Q9NQC8 304 aa15.73■□□□□ 0.11
SDCBP-209ENST00000522243 SLC2A9Q9NRM0 540 aa15.73■□□□□ 0.11
SDCBP-209ENST00000522243 C19orf73Q9NVV2 129 aa15.73■□□□□ 0.11
SDCBP-209ENST00000522243 NPIPB5A8MRT5 1133 aa15.72■□□□□ 0.11
SDCBP-209ENST00000522243 XRCC3O43542 346 aa15.72■□□□□ 0.11
SDCBP-209ENST00000522243 NDUFB8O95169 186 aa15.72■□□□□ 0.11
SDCBP-209ENST00000522243 HLA-AP01891 365 aaKnown RBP15.72■□□□□ 0.11
SDCBP-209ENST00000522243 REG1AP05451 166 aa15.72■□□□□ 0.11
SDCBP-209ENST00000522243 RPL8P62917 257 aaKnown RBP15.72■□□□□ 0.11
SDCBP-209ENST00000522243 MSMO1Q15800 293 aa15.72■□□□□ 0.11
SDCBP-209ENST00000522243 ZNF818PQ6ZRF7 136 aa15.72■□□□□ 0.11
SDCBP-209ENST00000522243 GIMAP1Q8WWP7 306 aa15.72■□□□□ 0.11
SDCBP-209ENST00000522243 SIGLEC8Q9NYZ4 499 aa15.72■□□□□ 0.11
SDCBP-209ENST00000522243 TMEM127O75204 238 aa15.71■□□□□ 0.11
SDCBP-209ENST00000522243 EDN2P20800 178 aa15.71■□□□□ 0.11
SDCBP-209ENST00000522243 CATR1Q13166 79 aa15.71■□□□□ 0.11
SDCBP-209ENST00000522243 UBE2NLQ5JXB2 153 aa15.71■□□□□ 0.11
SDCBP-209ENST00000522243 LCN12Q6JVE5 192 aa15.71■□□□□ 0.11
SDCBP-209ENST00000522243 ADAMTSL5Q6ZMM2 481 aa15.71■□□□□ 0.11
SDCBP-209ENST00000522243 CROCCP3Q8IVE0 287 aa15.71■□□□□ 0.11
SDCBP-209ENST00000522243 Q8N402 240 aa15.71■□□□□ 0.11
SDCBP-209ENST00000522243 SAMD12Q8N8I0 201 aa15.71■□□□□ 0.11
SDCBP-209ENST00000522243 TSPAN14Q8NG11 270 aa15.71■□□□□ 0.11
SDCBP-209ENST00000522243 OR51H1Q8NH63 302 aa15.71■□□□□ 0.11
SDCBP-209ENST00000522243 FANCD2OSQ96PS1 177 aa15.71■□□□□ 0.11
SDCBP-209ENST00000522243 BET1LQ9NYM9 111 aa15.71■□□□□ 0.11
SDCBP-209ENST00000522243 EHFQ9NZC4 300 aa15.71■□□□□ 0.11
SDCBP-209ENST00000522243 DMRT1Q9Y5R6 373 aa15.71■□□□□ 0.11
SDCBP-209ENST00000522243 A0A087WXM4 84 aa15.7■□□□□ 0.1
SDCBP-209ENST00000522243 TRAV3A0A0B4J244 114 aa15.7■□□□□ 0.1
SDCBP-209ENST00000522243 CGB1A6NKQ9 187 aa15.7■□□□□ 0.1
SDCBP-209ENST00000522243 C3orf84H3BNL1 204 aa15.7■□□□□ 0.1
SDCBP-209ENST00000522243 OR2C1O95371 312 aa15.7■□□□□ 0.1
SDCBP-209ENST00000522243 RPA2P15927 270 aa15.7■□□□□ 0.1
SDCBP-209ENST00000522243 HLA-GP17693 338 aa15.7■□□□□ 0.1
SDCBP-209ENST00000522243 PSMB6P28072 239 aa15.7■□□□□ 0.1
SDCBP-209ENST00000522243 MECP2P51608 486 aaKnown RBP15.7■□□□□ 0.1
SDCBP-209ENST00000522243 TAS2R20P59543 309 aa15.7■□□□□ 0.1
SDCBP-209ENST00000522243 HERV-K104P61576 105 aa15.7■□□□□ 0.1
SDCBP-209ENST00000522243 MUC7Q8TAX7 377 aa15.7■□□□□ 0.1
SDCBP-209ENST00000522243 TM2D3Q9BRN9 247 aa15.7■□□□□ 0.1
SDCBP-209ENST00000522243 THAP7Q9BT49 309 aaPredicted RBP15.7■□□□□ 0.1
SDCBP-209ENST00000522243 VCX3AQ9NNX9 186 aa15.7■□□□□ 0.1
SDCBP-209ENST00000522243 HUWE1Q7Z6Z7 4374 aaKnown RBP15.7■□□□□ 0.1
SDCBP-209ENST00000522243 A8MZ25 164 aa15.69■□□□□ 0.1
SDCBP-209ENST00000522243 RBFOX2O43251 390 aaKnown RBP eCLIP15.69■□□□□ 0.1
SDCBP-209ENST00000522243 HPRT1P00492 218 aa15.69■□□□□ 0.1
SDCBP-209ENST00000522243 PMP2P02689 132 aa15.69■□□□□ 0.1
SDCBP-209ENST00000522243 CRYGCP07315 174 aa15.69■□□□□ 0.1
SDCBP-209ENST00000522243 RFX2P48378 723 aa15.69■□□□□ 0.1
SDCBP-209ENST00000522243 TMEM69Q5SWH9 247 aa15.69■□□□□ 0.1
SDCBP-209ENST00000522243 AADACL3Q5VUY0 350 aa15.69■□□□□ 0.1
SDCBP-209ENST00000522243 CLEC19AQ6UXS0 136 aa15.69■□□□□ 0.1
SDCBP-209ENST00000522243 GTSCR1Q86UQ5 136 aa15.69■□□□□ 0.1
SDCBP-209ENST00000522243 OR4A5Q8NH83 315 aa15.69■□□□□ 0.1
SDCBP-209ENST00000522243 KCTD12Q96CX2 325 aaKnown RBP15.69■□□□□ 0.1
SDCBP-209ENST00000522243 CCDC140Q96MF4 163 aa15.69■□□□□ 0.1
SDCBP-209ENST00000522243 UPK2O00526 184 aa15.68■□□□□ 0.1
SDCBP-209ENST00000522243 GGCTO75223 188 aaKnown RBP15.68■□□□□ 0.1
SDCBP-209ENST00000522243 S1PR2O95136 353 aa15.68■□□□□ 0.1
SDCBP-209ENST00000522243 DEFA4P12838 97 aa15.68■□□□□ 0.1
SDCBP-209ENST00000522243 CTRB1P17538 263 aa15.68■□□□□ 0.1
SDCBP-209ENST00000522243 GNRHRP30968 328 aa15.68■□□□□ 0.1
SDCBP-209ENST00000522243 TAS2R31P59538 309 aa15.68■□□□□ 0.1
SDCBP-209ENST00000522243 CD300EQ496F6 205 aaPredicted RBP15.68■□□□□ 0.1
SDCBP-209ENST00000522243 CTRB2Q6GPI1 263 aa15.68■□□□□ 0.1
SDCBP-209ENST00000522243 DYNLRB2Q8TF09 96 aa15.68■□□□□ 0.1
SDCBP-209ENST00000522243 AIFM2Q9BRQ8 373 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms