RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 FOXRED2Q8IWF2 684 aa10.48□□□□□ -0.73
CPNE3-205ENST00000522240 PUSL1Q8N0Z8 303 aaKnown RBP10.48□□□□□ -0.73
CPNE3-205ENST00000522240 OR4D5Q8NGN0 318 aa10.48□□□□□ -0.73
CPNE3-205ENST00000522240 OR2T10Q8NGZ9 312 aa10.48□□□□□ -0.73
CPNE3-205ENST00000522240 RANGRFQ9HD47 186 aaPredicted RBP10.48□□□□□ -0.73
CPNE3-205ENST00000522240 CACNG5Q9UF02 275 aa10.48□□□□□ -0.73
CPNE3-205ENST00000522240 FAM96BQ9Y3D0 163 aa10.48□□□□□ -0.73
CPNE3-205ENST00000522240 ZANQ9Y493 2812 aa10.48□□□□□ -0.73
CPNE3-205ENST00000522240 DNHD1Q96M86 4753 aa10.47□□□□□ -0.73
CPNE3-205ENST00000522240 PITX3O75364 302 aa10.47□□□□□ -0.73
CPNE3-205ENST00000522240 GHRHP01286 108 aa10.47□□□□□ -0.73
CPNE3-205ENST00000522240 IGKV1D-33P01593 117 aa10.47□□□□□ -0.73
CPNE3-205ENST00000522240 IGKV1-33P01594 117 aa10.47□□□□□ -0.73
CPNE3-205ENST00000522240 IGLV2-23P01705 113 aa10.47□□□□□ -0.73
CPNE3-205ENST00000522240 SNRNP70P08621 437 aaKnown RBP10.47□□□□□ -0.73
CPNE3-205ENST00000522240 IL6RP08887 468 aaPredicted RBP10.47□□□□□ -0.73
CPNE3-205ENST00000522240 HNF1AP20823 631 aa10.47□□□□□ -0.73
CPNE3-205ENST00000522240 IL15RAQ13261 267 aa10.47□□□□□ -0.73
CPNE3-205ENST00000522240 LRRC75BQ2VPJ9 315 aa10.47□□□□□ -0.73
CPNE3-205ENST00000522240 AARDQ4LEZ3 155 aa10.47□□□□□ -0.73
CPNE3-205ENST00000522240 Q8N6K4 173 aa10.47□□□□□ -0.73
CPNE3-205ENST00000522240 OR8H1Q8NGG4 311 aa10.47□□□□□ -0.73
CPNE3-205ENST00000522240 OR4A5Q8NH83 315 aa10.47□□□□□ -0.73
CPNE3-205ENST00000522240 PPP1R14BQ96C90 147 aa10.47□□□□□ -0.73
CPNE3-205ENST00000522240 EAF1Q96JC9 268 aaPredicted RBP10.47□□□□□ -0.73
CPNE3-205ENST00000522240 FYTTD1Q96QD9 318 aaKnown RBP10.47□□□□□ -0.73
CPNE3-205ENST00000522240 CHIAQ9BZP6 476 aa10.47□□□□□ -0.73
CPNE3-205ENST00000522240 ZFP57Q9NU63 452 aa10.47□□□□□ -0.73
CPNE3-205ENST00000522240 CACFD1Q9UGQ2 172 aa10.47□□□□□ -0.73
CPNE3-205ENST00000522240 C15orf61A6NNL5 157 aa10.46□□□□□ -0.73
CPNE3-205ENST00000522240 SRRM4A7MD48 611 aaKnown RBP10.46□□□□□ -0.73
CPNE3-205ENST00000522240 FAM90A26D6RGX4 464 aa10.46□□□□□ -0.73
CPNE3-205ENST00000522240 KBTBD11O94819 623 aa10.46□□□□□ -0.73
CPNE3-205ENST00000522240 NDUFA3O95167 84 aa10.46□□□□□ -0.73
CPNE3-205ENST00000522240 OR9G9P0C7N8 305 aa10.46□□□□□ -0.73
CPNE3-205ENST00000522240 FAM106CPP0CH98 169 aa10.46□□□□□ -0.73
CPNE3-205ENST00000522240 PET100P0DJ07 73 aa10.46□□□□□ -0.73
CPNE3-205ENST00000522240 FGL1Q08830 312 aa10.46□□□□□ -0.73
CPNE3-205ENST00000522240 FAM120AOSQ5T036 256 aa10.46□□□□□ -0.73
CPNE3-205ENST00000522240 SSX9Q7RTT3 188 aa10.46□□□□□ -0.73
CPNE3-205ENST00000522240 VKORC1L1Q8N0U8 176 aa10.46□□□□□ -0.73
CPNE3-205ENST00000522240 TEX45Q8NA69 505 aa10.46□□□□□ -0.73
CPNE3-205ENST00000522240 NPBQ8NG41 125 aa10.46□□□□□ -0.73
CPNE3-205ENST00000522240 OR1S1Q8NH92 325 aa10.46□□□□□ -0.73
CPNE3-205ENST00000522240 TMEM167AQ8TBQ9 72 aa10.46□□□□□ -0.73
CPNE3-205ENST00000522240 COL6A5A8TX70 2615 aa10.46□□□□□ -0.74
CPNE3-205ENST00000522240 ATRQ13535 2644 aa10.46□□□□□ -0.74
CPNE3-205ENST00000522240 CSPG4Q6UVK1 2322 aa10.45□□□□□ -0.74
CPNE3-205ENST00000522240 UPK2O00526 184 aa10.45□□□□□ -0.74
CPNE3-205ENST00000522240 NBR2O15453 112 aa10.45□□□□□ -0.74
CPNE3-205ENST00000522240 TMEM11P17152 192 aa10.45□□□□□ -0.74
CPNE3-205ENST00000522240 PAX6P26367 422 aa10.45□□□□□ -0.74
CPNE3-205ENST00000522240 NKX2-1P43699 371 aaPredicted RBP10.45□□□□□ -0.74
CPNE3-205ENST00000522240 HES1Q14469 280 aa10.45□□□□□ -0.74
CPNE3-205ENST00000522240 PSG5Q15238 335 aa10.45□□□□□ -0.74
CPNE3-205ENST00000522240 MMDQ15546 238 aa10.45□□□□□ -0.74
CPNE3-205ENST00000522240 IZUMO4Q1ZYL8 232 aa10.45□□□□□ -0.74
CPNE3-205ENST00000522240 Q6ZRM9 215 aa10.45□□□□□ -0.74
CPNE3-205ENST00000522240 ZNF429Q86V71 674 aa10.45□□□□□ -0.74
CPNE3-205ENST00000522240 OR2T35Q8NGX2 323 aa10.45□□□□□ -0.74
CPNE3-205ENST00000522240 PPP1R1CQ8WVI7 109 aa10.45□□□□□ -0.74
CPNE3-205ENST00000522240 YAE1D1Q9NRH1 226 aa10.45□□□□□ -0.74
CPNE3-205ENST00000522240 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.45□□□□□ -0.74
CPNE3-205ENST00000522240 GSKIPQ9P0R6 139 aa10.45□□□□□ -0.74
CPNE3-205ENST00000522240 KIAA1456Q9P272 454 aa10.45□□□□□ -0.74
CPNE3-205ENST00000522240 PRNDQ9UKY0 176 aa10.45□□□□□ -0.74
CPNE3-205ENST00000522240 FOXA2Q9Y261 457 aaPredicted RBP10.45□□□□□ -0.74
CPNE3-205ENST00000522240 POMT1Q9Y6A1 747 aa10.45□□□□□ -0.74
CPNE3-205ENST00000522240 STAB1Q9NY15 2570 aa10.45□□□□□ -0.74
CPNE3-205ENST00000522240 G3V3Q6 166 aa10.44□□□□□ -0.74
CPNE3-205ENST00000522240 RRHO14718 337 aa10.44□□□□□ -0.74
CPNE3-205ENST00000522240 SLC25A17O43808 307 aa10.44□□□□□ -0.74
CPNE3-205ENST00000522240 FBXO24O75426 580 aa10.44□□□□□ -0.74
CPNE3-205ENST00000522240 SNAPC5O75971 98 aa10.44□□□□□ -0.74
CPNE3-205ENST00000522240 C1QBP02746 253 aa10.44□□□□□ -0.74
CPNE3-205ENST00000522240 CRYGBP07316 175 aa10.44□□□□□ -0.74
CPNE3-205ENST00000522240 RAB32Q13637 225 aa10.44□□□□□ -0.74
CPNE3-205ENST00000522240 DEFB112Q30KQ8 113 aa10.44□□□□□ -0.74
CPNE3-205ENST00000522240 PDLIM3Q53GG5 364 aaPredicted RBP10.44□□□□□ -0.74
CPNE3-205ENST00000522240 OR52E5Q8NH55 327 aa10.44□□□□□ -0.74
CPNE3-205ENST00000522240 OR4A16Q8NH70 328 aa10.44□□□□□ -0.74
CPNE3-205ENST00000522240 PRDM13Q9H4Q3 707 aa10.44□□□□□ -0.74
CPNE3-205ENST00000522240 TMEM14BQ9NUH8 114 aa10.44□□□□□ -0.74
CPNE3-205ENST00000522240 FKBP11Q9NYL4 201 aa10.44□□□□□ -0.74
CPNE3-205ENST00000522240 C1RLQ9NZP8 487 aa10.44□□□□□ -0.74
CPNE3-205ENST00000522240 HSPB7Q9UBY9 170 aa10.44□□□□□ -0.74
CPNE3-205ENST00000522240 PITPNC1Q9UKF7 332 aa10.44□□□□□ -0.74
CPNE3-205ENST00000522240 SIGLEC9Q9Y336 463 aa10.44□□□□□ -0.74
CPNE3-205ENST00000522240 FN1P02751 2386 aaKnown RBP10.44□□□□□ -0.74
CPNE3-205ENST00000522240 TRAV14DV4A0A0A6YYC5 116 aa10.43□□□□□ -0.74
CPNE3-205ENST00000522240 ST8SIA3O43173 380 aa10.43□□□□□ -0.74
CPNE3-205ENST00000522240 RBMXL2O75526 392 aaKnown RBP10.43□□□□□ -0.74
CPNE3-205ENST00000522240 MPC2O95563 127 aa10.43□□□□□ -0.74
CPNE3-205ENST00000522240 MBPP02686 304 aaPredicted RBP10.43□□□□□ -0.74
CPNE3-205ENST00000522240 CNTFRP26992 372 aa10.43□□□□□ -0.74
CPNE3-205ENST00000522240 PSMB6P28072 239 aa10.43□□□□□ -0.74
CPNE3-205ENST00000522240 MAS1LP35410 378 aa10.43□□□□□ -0.74
CPNE3-205ENST00000522240 SRP14P37108 136 aaKnown RBP10.43□□□□□ -0.74
CPNE3-205ENST00000522240 OR2B8PP59922 312 aa10.43□□□□□ -0.74
CPNE3-205ENST00000522240 RPL8P62917 257 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms