RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 SAA1P0DJI8 122 aaPredicted RBP7.66□□□□□ -1.18
SHPRH-209ENST00000521977 P2RY1P47900 373 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 LGALS7P47929 136 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 POLR2GP62487 172 aaKnown RBP eCLIP7.66□□□□□ -1.18
SHPRH-209ENST00000521977 TNFRSF9Q07011 255 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 OR2F1Q13607 317 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 OR4A47Q6IF82 309 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 CCDC144NLQ6NUI1 221 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 ACOT7LQ6ZUV0 252 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 SSX9Q7RTT3 188 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 MOB3BQ86TA1 216 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 ZNF429Q86V71 674 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 PDZD9Q8IXQ8 264 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 VKORC1L1Q8N0U8 176 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 DYNAPQ8N1N2 210 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 KCNRGQ8N5I3 272 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 OR52E5Q8NH55 327 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 OR4A5Q8NH83 315 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 MALSU1Q96EH3 234 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 HARBI1Q96MB7 349 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 RNF5Q99942 180 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 MS4A7Q9GZW8 240 aaPredicted RBP7.66□□□□□ -1.18
SHPRH-209ENST00000521977 MFFQ9GZY8 342 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 TMEM14BQ9NUH8 114 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 CACFD1Q9UGQ2 172 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 FOXA2Q9Y261 457 aaPredicted RBP7.66□□□□□ -1.18
SHPRH-209ENST00000521977 NSG2Q9Y328 171 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 GCN1Q92616 2671 aaKnown RBP7.66□□□□□ -1.18
SHPRH-209ENST00000521977 CENPEQ02224 2701 aa7.66□□□□□ -1.18
SHPRH-209ENST00000521977 ZNF469Q96JG9 3925 aaPredicted RBP7.66□□□□□ -1.18
SHPRH-209ENST00000521977 IGHV3-72A0A0B4J1Y9 119 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 TRAV3A0A0B4J244 114 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 IGHV1-69DA0A0B4J2H0 117 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 A0A0D9SG52 128 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 MSGN1A6NI15 193 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 C15orf61A6NNL5 157 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 J3QLI3 93 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 UPK2O00526 184 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 TIMM23O14925 209 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 PDZD2O15018 2839 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 SYNGR2O43760 224 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 CHST1O43916 411 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 VENTXO95231 258 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 TMEM50AO95807 157 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 IGHV1-69P01742 117 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 CRYGBP07316 175 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 HKR1P10072 659 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 SAA4P35542 130 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 PAX9P55771 341 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 LGALS4P56470 323 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 TAS2R30P59541 319 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 UBE2KP61086 200 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 RPS16P62249 146 aaKnown RBP7.65□□□□□ -1.18
SHPRH-209ENST00000521977 EBI3Q14213 229 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 TMEM249Q2WGJ8 235 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 INO80EQ8NBZ0 244 aaPredicted RBP7.65□□□□□ -1.18
SHPRH-209ENST00000521977 MAPK1IP1LQ8NDC0 245 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 TMEM167AQ8TBQ9 72 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 C17orf50Q8WW18 174 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 RITA1Q96K30 269 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 RAB40CQ96S21 281 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 QTRT1Q9BXR0 403 aaKnown RBP7.65□□□□□ -1.18
SHPRH-209ENST00000521977 MAGT1Q9H0U3 335 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 C7orf69Q9H7B7 122 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 HILPDAQ9Y5L2 63 aa7.65□□□□□ -1.18
SHPRH-209ENST00000521977 CSMD1Q96PZ7 3565 aa7.65□□□□□ -1.19
SHPRH-209ENST00000521977 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.64□□□□□ -1.194e-9■■■■■ 34.1
SHPRH-209ENST00000521977 KCNAB3O43448 404 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 SSSCA1O60232 199 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 MED6O75586 246 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 KBTBD11O94819 623 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 NXPH3O95157 252 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 PVALBP20472 110 aaPredicted RBP7.64□□□□□ -1.19
SHPRH-209ENST00000521977 RPL12P30050 165 aaKnown RBP7.64□□□□□ -1.19
SHPRH-209ENST00000521977 S100A11P31949 105 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 SPCS3P61009 180 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 IFITM2Q01629 132 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 SSX2Q16385 188 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 MRGPRG-AS1Q2M3A8 158 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 KLF17Q5JT82 389 aaPredicted RBP7.64□□□□□ -1.19
SHPRH-209ENST00000521977 GPR157Q5UAW9 335 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 TMUB2Q71RG4 321 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 TEX45Q8NA69 505 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 WFDC11Q8NEX6 87 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 OR4A16Q8NH70 328 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 VSTM2AQ8TAG5 236 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 SMIM8Q96KF7 97 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 MEGF9Q9H1U4 602 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 RBKSQ9H477 322 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 LYRM2Q9NU23 88 aaPredicted RBP7.64□□□□□ -1.19
SHPRH-209ENST00000521977 PRNDQ9UKY0 176 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 ZNF257Q9Y2Q1 563 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 WSB1Q9Y6I7 421 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 SVEP1Q4LDE5 3571 aa7.64□□□□□ -1.19
SHPRH-209ENST00000521977 FASNP49327 2511 aaKnown RBP7.63□□□□□ -1.19
SHPRH-209ENST00000521977 TRAV40A0A0B4J280 105 aa7.63□□□□□ -1.19
SHPRH-209ENST00000521977 WRBO00258 174 aa7.63□□□□□ -1.19
SHPRH-209ENST00000521977 GPR137BO60478 399 aa7.63□□□□□ -1.19
SHPRH-209ENST00000521977 NDUFA3O95167 84 aa7.63□□□□□ -1.19
SHPRH-209ENST00000521977 SPDEFO95238 335 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms