RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 INS-IGF2F8WCM5 200 aa7.36□□□□□ -1.23
CLK4-209ENST00000521621 H0Y980 276 aa7.36□□□□□ -1.23
CLK4-209ENST00000521621 UPK2O00526 184 aa7.36□□□□□ -1.23
CLK4-209ENST00000521621 RGS5O15539 181 aa7.36□□□□□ -1.23
CLK4-209ENST00000521621 CD3DP04234 171 aa7.36□□□□□ -1.23
CLK4-209ENST00000521621 RPLP1P05386 114 aaKnown RBP7.36□□□□□ -1.23
CLK4-209ENST00000521621 CD40LGP29965 261 aa7.36□□□□□ -1.23
CLK4-209ENST00000521621 DGCR2P98153 550 aa7.36□□□□□ -1.23
CLK4-209ENST00000521621 FAM223AQ8IWN6 122 aa7.36□□□□□ -1.23
CLK4-209ENST00000521621 PRRT1Q99946 306 aa7.36□□□□□ -1.23
CLK4-209ENST00000521621 ZNF430Q9H8G1 570 aaPredicted RBP7.36□□□□□ -1.23
CLK4-209ENST00000521621 SOX15O60248 233 aa7.36□□□□□ -1.23
CLK4-209ENST00000521621 IFNA6P05013 189 aa7.36□□□□□ -1.23
CLK4-209ENST00000521621 LGALS1P09382 135 aaKnown RBP7.36□□□□□ -1.23
CLK4-209ENST00000521621 TSPAN5P62079 268 aa7.36□□□□□ -1.23
CLK4-209ENST00000521621 EGFEM1PQ0D2K5 195 aa7.36□□□□□ -1.23
CLK4-209ENST00000521621 NSUN5P1Q3KNT7 163 aa7.36□□□□□ -1.23
CLK4-209ENST00000521621 AARDQ4LEZ3 155 aa7.36□□□□□ -1.23
CLK4-209ENST00000521621 ZNF585BQ52M93 769 aa7.36□□□□□ -1.23
CLK4-209ENST00000521621 SRSF12Q8WXF0 261 aaKnown RBP7.36□□□□□ -1.23
CLK4-209ENST00000521621 SCGB3A2Q96PL1 93 aa7.36□□□□□ -1.23
CLK4-209ENST00000521621 FKBP11Q9NYL4 201 aa7.36□□□□□ -1.23
CLK4-209ENST00000521621 FABP12A6NFH5 140 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 ATG12O94817 140 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 RAB3DO95716 219 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 OR9G9P0C7N8 305 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 PF4V1P10720 104 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 HIST1H1BP16401 226 aaKnown RBP7.35□□□□□ -1.23
CLK4-209ENST00000521621 HLA-GP17693 338 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 S100A5P33763 92 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 AP3S2P59780 193 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 IL18Q14116 193 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 OR4A47Q6IF82 309 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 UNQ5815/PRO19632Q6UWF5 114 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 ZNF329Q86UD4 541 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 CCDC71LQ8N9Z2 235 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 ADAD2Q8NCV1 583 aaKnown RBP7.35□□□□□ -1.23
CLK4-209ENST00000521621 OR6Q1Q8NGQ2 317 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 TRIM63Q969Q1 353 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 R3HDM4Q96D70 268 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 C6orf62Q9GZU0 229 aaPredicted RBP7.35□□□□□ -1.23
CLK4-209ENST00000521621 SLC2A9Q9NRM0 540 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 TEX22C9J3V5 150 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 G3V318 75 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 OR8U8P0C7N1 319 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 FXYD4P59646 89 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 RPL8P62917 257 aaKnown RBP7.35□□□□□ -1.23
CLK4-209ENST00000521621 CNPY1Q3B7I2 92 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 MRPL41Q8IXM3 137 aaKnown RBP7.35□□□□□ -1.23
CLK4-209ENST00000521621 RAX2Q96IS3 184 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 TSC22D3Q99576 134 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 CACFD1Q9UGQ2 172 aa7.35□□□□□ -1.23
CLK4-209ENST00000521621 CCL24O00175 119 aa7.34□□□□□ -1.23
CLK4-209ENST00000521621 MPPED1O15442 326 aa7.34□□□□□ -1.23
CLK4-209ENST00000521621 RAMP3O60896 148 aa7.34□□□□□ -1.23
CLK4-209ENST00000521621 P0C879 139 aa7.34□□□□□ -1.23
CLK4-209ENST00000521621 INSL3P51460 131 aa7.34□□□□□ -1.23
CLK4-209ENST00000521621 KLF9Q13886 244 aaPredicted RBP7.34□□□□□ -1.23
CLK4-209ENST00000521621 KLHL30-AS1Q8NEE0 82 aa7.34□□□□□ -1.23
CLK4-209ENST00000521621 IL22RA2Q969J5 263 aa7.34□□□□□ -1.23
CLK4-209ENST00000521621 MRGPRFQ96AM1 343 aa7.34□□□□□ -1.23
CLK4-209ENST00000521621 CNIH1O95406 144 aa7.34□□□□□ -1.23
CLK4-209ENST00000521621 HSPB1P04792 205 aaKnown RBP7.34□□□□□ -1.23
CLK4-209ENST00000521621 FAUP35544 74 aaKnown RBP7.34□□□□□ -1.23
CLK4-209ENST00000521621 DHODHQ02127 395 aa7.34□□□□□ -1.23
CLK4-209ENST00000521621 PJVKQ0ZLH3 352 aa7.34□□□□□ -1.23
CLK4-209ENST00000521621 PDLIM3Q53GG5 364 aaPredicted RBP7.34□□□□□ -1.23
CLK4-209ENST00000521621 ZNF343Q6P1L6 599 aa7.34□□□□□ -1.23
CLK4-209ENST00000521621 TBC1D26Q86UD7 250 aa7.34□□□□□ -1.23
CLK4-209ENST00000521621 LFNGQ8NES3 379 aa7.34□□□□□ -1.23
CLK4-209ENST00000521621 OR1L6Q8NGR2 347 aa7.34□□□□□ -1.23
CLK4-209ENST00000521621 OR5B3Q8NH48 314 aa7.34□□□□□ -1.23
CLK4-209ENST00000521621 DCUN1D5Q9BTE7 237 aa7.34□□□□□ -1.23
CLK4-209ENST00000521621 PRNDQ9UKY0 176 aa7.34□□□□□ -1.23
CLK4-209ENST00000521621 GPR132Q9UNW8 380 aa7.34□□□□□ -1.23
CLK4-209ENST00000521621 WSB1Q9Y6I7 421 aa7.34□□□□□ -1.23
CLK4-209ENST00000521621 A0A1W2PN81 502 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 PF4P02776 101 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 UCP1P25874 307 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 CHRNA7P36544 502 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 RPL27AP46776 148 aaKnown RBP7.33□□□□□ -1.24
CLK4-209ENST00000521621 OR2B8PP59922 312 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 ERVK-16P61578 105 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 ZNF429Q86V71 674 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 FAM219AQ8IW50 185 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 C11orf44Q8N8P7 122 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 GALNT14Q96FL9 552 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 SEC22AQ96IW7 307 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 FYTTD1Q96QD9 318 aaKnown RBP7.33□□□□□ -1.24
CLK4-209ENST00000521621 THAP7Q9BT49 309 aaPredicted RBP7.33□□□□□ -1.24
CLK4-209ENST00000521621 TMEM140Q9NV12 185 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 LINC00527Q9UJ94 153 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 MSGN1A6NI15 193 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 MARCH11A6NNE9 402 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 M0QYG6 137 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 DHFRP00374 187 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 RLN1P04808 185 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 LPAR6P43657 344 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 ZNF79Q15937 498 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 TNXAQ16473 311 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms