RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-204	ENST00000521331		A8MWP6	167 aa		11.16	□□□□□ -0.62
PRKDC-204	ENST00000521331	KBTBD11	O94819	623 aa		11.16	□□□□□ -0.62
PRKDC-204	ENST00000521331	EDN2	P20800	178 aa		11.16	□□□□□ -0.62
PRKDC-204	ENST00000521331	RPL27A	P46776	148 aa	Known RBP	11.16	□□□□□ -0.62
PRKDC-204	ENST00000521331	OR4A47	Q6IF82	309 aa		11.16	□□□□□ -0.62
PRKDC-204	ENST00000521331	TMEM61	Q8N0U2	210 aa		11.16	□□□□□ -0.62
PRKDC-204	ENST00000521331	OR52B4	Q8NGK2	314 aa		11.16	□□□□□ -0.62
PRKDC-204	ENST00000521331	OR4S2	Q8NH73	311 aa		11.16	□□□□□ -0.62
PRKDC-204	ENST00000521331	EEF1AKMT3	Q96AZ1	226 aa		11.16	□□□□□ -0.62
PRKDC-204	ENST00000521331	OR2A7	Q96R45	310 aa		11.16	□□□□□ -0.62
PRKDC-204	ENST00000521331	OVOL2	Q9BRP0	275 aa		11.16	□□□□□ -0.62
PRKDC-204	ENST00000521331	RBMX2	Q9Y388	322 aa	Known RBP	11.16	□□□□□ -0.62
PRKDC-204	ENST00000521331	IGKV1D-8	A0A087WSZ0	117 aa		11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	ZNF320	A2RRD8	509 aa		11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	TMEM213	A2RRL7	107 aa		11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331		J3QRK9	145 aa		11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	HLA-DQB1	P01920	261 aa		11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	CRYGC	P07315	174 aa		11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	IL6R	P08887	468 aa	Predicted RBP	11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	HIST1H1B	P16401	226 aa	Known RBP	11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	MYL9	P24844	172 aa		11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	OR2B11	Q5JQS5	317 aa		11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	CLEC19A	Q6UXS0	136 aa		11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	PRSS48	Q7RTY5	328 aa		11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	VKORC1L1	Q8N0U8	176 aa		11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	PUSL1	Q8N0Z8	303 aa	Known RBP	11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	TMEM167A	Q8TBQ9	72 aa		11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	CACNG8	Q8WXS5	425 aa		11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	CCDC140	Q96MF4	163 aa		11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	FANCD2OS	Q96PS1	177 aa		11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	FYTTD1	Q96QD9	318 aa	Known RBP	11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	HSD17B10	Q99714	261 aa	Known RBP	11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	CCDC90B	Q9GZT6	254 aa		11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	VCX3A	Q9NNX9	186 aa		11.15	□□□□□ -0.62
PRKDC-204	ENST00000521331	TRAV25	A0A0B4J276	109 aa		11.14	□□□□□ -0.63
PRKDC-204	ENST00000521331	NDUFB8	O95169	186 aa		11.14	□□□□□ -0.63
PRKDC-204	ENST00000521331	IGHV3-23	P01764	117 aa		11.14	□□□□□ -0.63
PRKDC-204	ENST00000521331	ZNF735	P0CB33	412 aa		11.14	□□□□□ -0.63
PRKDC-204	ENST00000521331	PSMB6	P28072	239 aa		11.14	□□□□□ -0.63
PRKDC-204	ENST00000521331	OR10A3	P58181	314 aa		11.14	□□□□□ -0.63
PRKDC-204	ENST00000521331	RPL30	P62888	115 aa	Known RBP	11.14	□□□□□ -0.63
PRKDC-204	ENST00000521331	KLK9	Q2XQG4	91 aa		11.14	□□□□□ -0.63
PRKDC-204	ENST00000521331	CNPY1	Q3B7I2	92 aa		11.14	□□□□□ -0.63
PRKDC-204	ENST00000521331	UXS1	Q8NBZ7	420 aa		11.14	□□□□□ -0.63
PRKDC-204	ENST00000521331	TCTEX1D2	Q8WW35	142 aa		11.14	□□□□□ -0.63
PRKDC-204	ENST00000521331	MARC2	Q969Z3	335 aa		11.14	□□□□□ -0.63
PRKDC-204	ENST00000521331	ST6GALNAC5	Q9BVH7	336 aa		11.14	□□□□□ -0.63
PRKDC-204	ENST00000521331	DCSTAMP	Q9H295	470 aa		11.14	□□□□□ -0.63
PRKDC-204	ENST00000521331	MLX	Q9UH92	298 aa		11.14	□□□□□ -0.63
PRKDC-204	ENST00000521331	KLK9	Q9UKQ9	250 aa		11.14	□□□□□ -0.63
PRKDC-204	ENST00000521331	RAB26	Q9ULW5	256 aa		11.14	□□□□□ -0.63
PRKDC-204	ENST00000521331	TRBV7-1	A0A0A6YYK4	115 aa		11.13	□□□□□ -0.63
PRKDC-204	ENST00000521331	CXorf65	A6NEN9	183 aa		11.13	□□□□□ -0.63
PRKDC-204	ENST00000521331	NUPR2	A6NF83	97 aa		11.13	□□□□□ -0.63
PRKDC-204	ENST00000521331	SCAF4	O95104	1147 aa	Known RBP	11.13	□□□□□ -0.63
PRKDC-204	ENST00000521331	LY6G6C	O95867	125 aa		11.13	□□□□□ -0.63
PRKDC-204	ENST00000521331	IGLV2-14	P01704	120 aa		11.13	□□□□□ -0.63
PRKDC-204	ENST00000521331	CTRB1	P17538	263 aa		11.13	□□□□□ -0.63
PRKDC-204	ENST00000521331	RAB3B	P20337	219 aa		11.13	□□□□□ -0.63
PRKDC-204	ENST00000521331	NFYA	P23511	347 aa	Predicted RBP	11.13	□□□□□ -0.63
PRKDC-204	ENST00000521331	CDNF	Q49AH0	187 aa		11.13	□□□□□ -0.63
PRKDC-204	ENST00000521331	CTRB2	Q6GPI1	263 aa		11.13	□□□□□ -0.63
PRKDC-204	ENST00000521331	C19orf35	Q6ZS72	473 aa		11.13	□□□□□ -0.63
PRKDC-204	ENST00000521331	CXorf58	Q96LI9	332 aa		11.13	□□□□□ -0.63
PRKDC-204	ENST00000521331	ATG5	Q9H1Y0	275 aa		11.13	□□□□□ -0.63
PRKDC-204	ENST00000521331		A0A1B0GW64	132 aa		11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331		E7EUB6	86 aa		11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	HRAS	P01112	189 aa		11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	SMIM18	P0DKX4	95 aa		11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	DEFA4	P12838	97 aa		11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	AREG	P15514	252 aa		11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	GAL	P22466	123 aa		11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	HSPA13	P48723	471 aa		11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	RPL8	P62917	257 aa	Known RBP	11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	TM4SF20	Q53R12	229 aa		11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	HACD4	Q5VWC8	232 aa		11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	CNIH2	Q6PI25	160 aa		11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	BTNL8	Q6UX41	500 aa		11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	ZNF66	Q6ZN08	573 aa		11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	ZNF367	Q7RTV3	350 aa		11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	WFDC3	Q8IUB2	231 aa		11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	OR1L6	Q8NGR2	347 aa		11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	AIFM2	Q9BRQ8	373 aa		11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	ELF5	Q9UKW6	265 aa	Predicted RBP	11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	SPATA2	Q9UM82	520 aa		11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	TP53TG1	Q9Y2A0	90 aa		11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	SELENOK	Q9Y6D0	94 aa		11.12	□□□□□ -0.63
PRKDC-204	ENST00000521331	IGLV11-55	A0A075B6I3	123 aa		11.11	□□□□□ -0.63
PRKDC-204	ENST00000521331	IGKV1D-13	A0A0B4J2D9	117 aa		11.11	□□□□□ -0.63
PRKDC-204	ENST00000521331	IGKV1-13	P0DP09	117 aa		11.11	□□□□□ -0.63
PRKDC-204	ENST00000521331	HLA-G	P17693	338 aa		11.11	□□□□□ -0.63
PRKDC-204	ENST00000521331	CRHBP	P24387	322 aa		11.11	□□□□□ -0.63
PRKDC-204	ENST00000521331	APOC4	P55056	127 aa		11.11	□□□□□ -0.63
PRKDC-204	ENST00000521331	AQP4	P55087	323 aa		11.11	□□□□□ -0.63
PRKDC-204	ENST00000521331	TNFRSF9	Q07011	255 aa		11.11	□□□□□ -0.63
PRKDC-204	ENST00000521331	PMS2P11	Q13670	270 aa		11.11	□□□□□ -0.63
PRKDC-204	ENST00000521331	TBCE	Q15813	527 aa	Predicted RBP	11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms