RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 RAXQ9Y2V3 346 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 PXMP4Q9Y6I8 212 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 ZNF729A6NN14 1252 aaPredicted RBP8.44□□□□□ -1.06
MCF2-209ENST00000520602 NPIPB11E5RHQ5 1161 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 YPEL1O60688 119 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 LMO1P25800 156 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 LGALS4P56470 323 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 TMPRSS3P57727 454 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 TEPPQ6URK8 271 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 MISP3Q96FF7 219 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 YPEL2Q96QA6 119 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 DIRC2Q96SL1 478 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 NPVFQ9HCQ7 196 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 TMEM106BQ9NUM4 274 aa8.44□□□□□ -1.06
MCF2-209ENST00000520602 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.43□□□□□ -1.06
MCF2-209ENST00000520602 LY86O95711 162 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 TBR1Q16650 682 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 SPRNQ5BIV9 151 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 SEM1Q6ZVN7 128 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 PFDN5Q99471 154 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 PSMG3Q9BT73 122 aaPredicted RBP8.43□□□□□ -1.06
MCF2-209ENST00000520602 PLA2G2EQ9NZK7 142 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 HSPB7Q9UBY9 170 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 RNF115Q9Y4L5 304 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 ADAMTS20P59510 1910 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 IGHV3-21A0A0B4J1V1 117 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 DPRXA6NFQ7 191 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 F6UZH7 168 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 RHOBP62745 196 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 OR4A47Q6IF82 309 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 CLDND2Q8NHS1 167 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 SSX3Q99909 188 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 NPCDR1Q9BY65 106 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 FKBP11Q9NYL4 201 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 RALYQ9UKM9 306 aaKnown RBP8.43□□□□□ -1.06
MCF2-209ENST00000520602 ANKRD11Q6UB99 2663 aaPredicted RBP8.43□□□□□ -1.06
MCF2-209ENST00000520602 TRAV3A0A0B4J244 114 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 WFIKKN1Q96NZ8 548 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 NAT8Q9UHE5 227 aa8.43□□□□□ -1.06
MCF2-209ENST00000520602 LOC102723971A0A1B0GUV8 181 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 ICAM4Q14773 271 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 TNXAQ16473 311 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 ZNF506Q5JVG8 444 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 FAM216AQ8WUB2 273 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 ZNRD1Q9P1U0 126 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 INSIG2Q9Y5U4 225 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 PNRC1Q12796 327 aaPredicted RBP8.42□□□□□ -1.06
MCF2-209ENST00000520602 CT45A1Q5HYN5 189 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 CT45A3Q8NHU0 189 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 TMEM37Q8WXS4 190 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 IGHV1-69-2A0A0G2JMI3 117 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 SLC25A17O43808 307 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 COX7A2P2O60397 106 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 CGAP01215 116 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 GALR1P47211 349 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 TAS2R45P59539 299 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 PSG5Q15238 335 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 RNF212Q495C1 297 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 GCSAMLQ5JQS6 135 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 SLC16A13Q7RTY0 426 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 NEUROG1Q92886 237 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 TCEAL7Q9BRU2 100 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 MANBALQ9NQG1 85 aa8.42□□□□□ -1.06
MCF2-209ENST00000520602 SPTBN4Q9H254 2564 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.41□□□□□ -1.06
MCF2-209ENST00000520602 ZNF320A2RRD8 509 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 RRHO14718 337 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 TM4SF5O14894 197 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 KBTBD11O94819 623 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 NDUFB4O95168 129 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 CA2P00918 260 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 RD3LP0DJH9 198 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 MUC15Q8N387 334 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 OR1L8Q8NGR8 309 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 HES4Q9HCC6 221 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 COA4Q9NYJ1 87 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 TGIF2-C20orf24A0A0A6YYL0 155 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 DVL1O14640 695 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 MYOD1P15172 320 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 PRRX1P54821 245 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 SLX1AQ9BQ83 275 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 RAB1BQ9H0U4 201 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 FAM157AC9JC47 383 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 OR10J1P30954 320 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 MSMPQ1L6U9 139 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 HCP5Q6MZN7 132 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 ACSM6Q6P461 480 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 RPP25LQ8N5L8 163 aaKnown RBP8.41□□□□□ -1.06
MCF2-209ENST00000520602 VSTM2AQ8TAG5 236 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 USP34Q70CQ2 3546 aa8.41□□□□□ -1.06
MCF2-209ENST00000520602 CEACAM4O75871 244 aa8.4□□□□□ -1.06
MCF2-209ENST00000520602 REG1AP05451 166 aa8.4□□□□□ -1.06
MCF2-209ENST00000520602 ACAA1P09110 424 aaPredicted RBP8.4□□□□□ -1.06
MCF2-209ENST00000520602 CTRB1P17538 263 aa8.4□□□□□ -1.06
MCF2-209ENST00000520602 ORM2P19652 201 aa8.4□□□□□ -1.06
MCF2-209ENST00000520602 RPL8P62917 257 aaKnown RBP8.4□□□□□ -1.06
MCF2-209ENST00000520602 ZNF90Q03938 601 aa8.4□□□□□ -1.06
MCF2-209ENST00000520602 DAZAP2Q15038 168 aaPredicted RBP8.4□□□□□ -1.06
MCF2-209ENST00000520602 ADIPOQQ15848 244 aa8.4□□□□□ -1.06
MCF2-209ENST00000520602 CTRB2Q6GPI1 263 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms