RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 TGIF2LYQ8IUE0 185 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 NEIL1Q96FI4 390 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 C14orf144Q96I85 54 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 TMEM204Q9BSN7 226 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 ASCL3Q9NQ33 180 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 TTC28Q96AY4 2481 aa6.98□□□□□ -1.29
CTNNA1-210ENST00000518825 A0A1W2PPQ1 181 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 PRR33A8MZF0 331 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 H7BYZ3 331 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 SPINT2O43291 252 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 C1QTNF9P0C862 333 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 GZMBP10144 247 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 TUBG1P23258 451 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 RPP30P78346 268 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 C17orf58Q2M2W7 97 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 ACTL10Q5JWF8 245 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 OR5T1Q8NG75 326 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 PFDN5Q99471 154 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 CSMD1Q96PZ7 3565 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 OTOGLQ3ZCN5 2332 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 M0R1X1 148 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 F2RL2O00254 374 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 TGOLN2O43493 480 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 YPEL1O60688 119 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 NDUFB4O95168 129 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 HPRT1P00492 218 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 LHBP01229 141 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 CHRNA7P36544 502 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 PDLIM4P50479 330 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 TMPRSS3P57727 454 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 TCF23Q7RTU1 214 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 OR1P1Q8NH06 330 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 YPEL2Q96QA6 119 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 LSM4Q9Y4Z0 139 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 TMEM249Q2WGJ8 235 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 ARSJQ5FYB0 599 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 CT45A1Q5HYN5 189 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 MIC13Q5XKP0 118 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 CT45A3Q8NHU0 189 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 RAB1CQ92928 201 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 GGTLC1Q9BX51 225 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 ZNF292O60281 2723 aa6.97□□□□□ -1.29
CTNNA1-210ENST00000518825 ICE1Q9Y2F5 2266 aa6.96□□□□□ -1.29
CTNNA1-210ENST00000518825 TYMSP04818 313 aa6.96□□□□□ -1.29
CTNNA1-210ENST00000518825 ARL14EPLP0DKL9 152 aa6.96□□□□□ -1.29
CTNNA1-210ENST00000518825 GCH1P30793 250 aa6.96□□□□□ -1.29
CTNNA1-210ENST00000518825 HOXC12P31275 282 aa6.96□□□□□ -1.29
CTNNA1-210ENST00000518825 CASP6P55212 293 aa6.96□□□□□ -1.29
CTNNA1-210ENST00000518825 SPCS3P61009 180 aa6.96□□□□□ -1.29
CTNNA1-210ENST00000518825 RPL15P61313 204 aaKnown RBP6.96□□□□□ -1.29
CTNNA1-210ENST00000518825 SPATA31B1PQ5VZV4 182 aa6.96□□□□□ -1.29
CTNNA1-210ENST00000518825 TMEM144Q7Z5S9 345 aa6.96□□□□□ -1.29
CTNNA1-210ENST00000518825 ZNF709Q8N972 641 aa6.96□□□□□ -1.29
CTNNA1-210ENST00000518825 OR2V2Q96R30 315 aa6.96□□□□□ -1.29
CTNNA1-210ENST00000518825 PRO1933Q9H354 126 aa6.96□□□□□ -1.29
CTNNA1-210ENST00000518825 TMEM140Q9NV12 185 aa6.96□□□□□ -1.29
CTNNA1-210ENST00000518825 GNG12Q9UBI6 72 aa6.96□□□□□ -1.29
CTNNA1-210ENST00000518825 JPT1Q9UK76 154 aa6.96□□□□□ -1.29
CTNNA1-210ENST00000518825 FUT9Q9Y231 359 aa6.96□□□□□ -1.29
CTNNA1-210ENST00000518825 A0A1B0GUS0 222 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 XKRY2A2RUG3 117 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 AHRRA9YTQ3 701 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 TMPRSS2O15393 492 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 VENTXO95231 258 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 CFHR2P36980 270 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 ACOT6Q3I5F7 207 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 PRAMEF5Q5TYX0 476 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 ZNF474Q6S9Z5 364 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 BHLHA15Q7RTS1 189 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 PIP4P1Q86T03 277 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 RNASEH2CQ8TDP1 164 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 TMEM37Q8WXS4 190 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 SEPSECSQ9HD40 501 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 YTHDF2Q9Y5A9 579 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 SMCO3A2RU48 225 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 FAM90A9PA6NNJ1 464 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 PPP5D1E7EU14 171 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 C17orf112F2Z3M2 114 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 FOXH1O75593 365 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 IFNA10P01566 189 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 IL3RAP26951 378 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 OPRK1P41145 380 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 ZNF83P51522 516 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 JOSD1Q15040 202 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 DNLZQ5SXM8 178 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 MOGAT3Q86VF5 341 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 OR2T10Q8NGZ9 312 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 OR52E5Q8NH55 327 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 ANAPC16Q96DE5 110 aa6.96□□□□□ -1.3
CTNNA1-210ENST00000518825 RAI1Q7Z5J4 1906 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-210ENST00000518825 SPAARA0A1B0GVQ0 90 aa6.95□□□□□ -1.3
CTNNA1-210ENST00000518825 MGST3O14880 152 aa6.95□□□□□ -1.3
CTNNA1-210ENST00000518825 MMP23AO75900 390 aa6.95□□□□□ -1.3
CTNNA1-210ENST00000518825 STAG3L2P0CL84 134 aa6.95□□□□□ -1.3
CTNNA1-210ENST00000518825 STAG3L3P0CL85 134 aa6.95□□□□□ -1.3
CTNNA1-210ENST00000518825 SSMEM1Q8WWF3 244 aa6.95□□□□□ -1.3
CTNNA1-210ENST00000518825 SNRNP40Q96DI7 357 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-210ENST00000518825 TUBG2Q9NRH3 451 aa6.95□□□□□ -1.3
CTNNA1-210ENST00000518825 ZNRD1Q9P1U0 126 aa6.95□□□□□ -1.3
CTNNA1-210ENST00000518825 PXMP4Q9Y6I8 212 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms