RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 VSTM2AQ8TAG5 236 aa8.1□□□□□ -1.11
PDGFRB-203ENST00000517660 TCTEX1D2Q8WW35 142 aa8.1□□□□□ -1.11
PDGFRB-203ENST00000517660 YIPF6Q96EC8 236 aa8.1□□□□□ -1.11
PDGFRB-203ENST00000517660 S100A16Q96FQ6 103 aaKnown RBP8.1□□□□□ -1.11
PDGFRB-203ENST00000517660 PEF1Q9UBV8 284 aaKnown RBP8.1□□□□□ -1.11
PDGFRB-203ENST00000517660 DNAH10Q8IVF4 4471 aa8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 XRCC3O43542 346 aa8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 OR2A4O95047 310 aa8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 HRASP01112 189 aa8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 PTHLHP12272 177 aa8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 RPS19P39019 145 aaKnown RBP8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 KIR2DS2P43631 304 aa8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 BRWD1-AS2P59051 145 aa8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 ATP5G2Q06055 141 aa8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 SLC25A42Q86VD7 318 aa8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 ANKRD13BQ86YJ7 626 aa8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 PUSL1Q8N0Z8 303 aaKnown RBP8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 OR5AP2Q8NGF4 316 aa8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 TMEM167AQ8TBQ9 72 aa8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 SECTM1Q8WVN6 248 aa8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 GIMAP1Q8WWP7 306 aa8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 SNAPC3Q92966 411 aa8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 OR2A7Q96R45 310 aa8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 ASCL2Q99929 193 aa8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 CCL28Q9NRJ3 127 aa8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 TAS2R8Q9NYW2 309 aa8.09□□□□□ -1.11
PDGFRB-203ENST00000517660 TRBV9A0A0B4J1U6 114 aa8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 RBMY1BA6NDE4 496 aaKnown RBP8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 RBMY1EA6NEQ0 496 aaKnown RBP8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 FAM223BA6NKX1 122 aa8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 PPYP01298 95 aa8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 IGLV1-51P01701 117 aa8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 RBMY1DP0C7P1 496 aaKnown RBP8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 LYL1P12980 280 aa8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 MAS1LP35410 378 aa8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 TGFBR1P36897 503 aa8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 TMBIM6P55061 237 aa8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 SYNJ2BPP57105 145 aa8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 LSM3P62310 102 aaKnown RBP8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 RHOGP84095 191 aa8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 DEFA5Q01523 94 aa8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 C10orf55Q5SWW7 151 aa8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 FAM223AQ8IWN6 122 aa8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 VKORC1L1Q8N0U8 176 aa8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 OR9G4Q8NGQ1 327 aa8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 RAB2BQ8WUD1 216 aa8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 AIFM2Q9BRQ8 373 aa8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 RSRP1Q9BUV0 290 aa8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 SLC5A7Q9GZV3 580 aa8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 AKIP1Q9NQ31 210 aa8.08□□□□□ -1.12
PDGFRB-203ENST00000517660 TNCP24821 2201 aa8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 H3BMQ9 156 aa8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 RBFOX2O43251 390 aaKnown RBP eCLIP8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 TNFSF12O43508 249 aa8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 RBMXL2O75526 392 aaKnown RBP8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 KBTBD11O94819 623 aa8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 TRBV12-3P01733 135 aa8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 PRH1P02810 166 aa8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 FCER2P06734 321 aa8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 IL6RP08887 468 aaPredicted RBP8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 RPL27AP46776 148 aaKnown RBP8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 ZNF45Q02386 682 aa8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 RPEL1Q2QD12 228 aa8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 UBE2NLQ5JXB2 153 aa8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 ZFAND6Q6FIF0 208 aa8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 IL34Q6ZMJ4 242 aa8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 SPAG16Q8N0X2 631 aa8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 SAMD12Q8N8I0 201 aa8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 NECAP1Q8NC96 275 aa8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 OR4A5Q8NH83 315 aa8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 GPHA2Q96T91 129 aa8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 IFT46Q9NQC8 304 aa8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 SLC2A9Q9NRM0 540 aa8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 ZNF257Q9Y2Q1 563 aa8.07□□□□□ -1.12
PDGFRB-203ENST00000517660 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 MEIS3P1A6NDR6 274 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 HMX3A6NHT5 357 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 NPIPB5A8MRT5 1133 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 TEX22C9J3V5 150 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 H0Y980 276 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 CSN3P07498 182 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 ZNF735P0CB33 412 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 TAS2R20P59543 309 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 FXYD4P59646 89 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 RPL8P62917 257 aaKnown RBP8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 CATR1Q13166 79 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 EXOSC2Q13868 293 aaKnown RBP8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 FAM209BQ5JX69 171 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 TMEM69Q5SWH9 247 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 DHRS11Q6UWP2 260 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 SSX9Q7RTT3 188 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 HAPLN4Q86UW8 402 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 SBSPONQ8IVN8 264 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 CD300LFQ8TDQ1 290 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 BORCS5Q969J3 196 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 KCTD12Q96CX2 325 aaKnown RBP8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 FYTTD1Q96QD9 318 aaKnown RBP8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 BCL7BQ9BQE9 202 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 NAA50Q9GZZ1 169 aaKnown RBP8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 BET1LQ9NYM9 111 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms