RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 KLRF1Q9NZS2 232 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZNF581Q9P0T4 197 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 CLCF1Q9UBD9 225 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 NXT1Q9UKK6 140 aaKnown RBP4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 TP53TG3Q9ULZ0 132 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 MRPS17Q9Y2R5 130 aaKnown RBP4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 DOCK6Q96HP0 2047 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 TICRRQ7Z2Z1 1910 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 A0A1W2PPI3 338 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 A0A1W2PRD5 423 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 A0A1W2PRF3 423 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 A0A1W2PRM7 423 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 A1L4Q6 167 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 FNDC10F2Z333 226 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 SYS1-DBNDD2H3BUS1 97 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 CLDN5O00501 218 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 KLF7O75840 302 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 SNCGO76070 127 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 APOMO95445 188 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 CXorf1O96002 111 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 RENP00797 406 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 APCSP02743 223 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 AMY1AP04745 511 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 WNT2P09544 360 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 PRSS56P0CW18 603 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 IL9P15248 144 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 HMGA1P17096 107 aaKnown RBP4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 GABRG2P18507 467 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 COX5AP20674 150 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 NTF3P20783 257 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 KIR2DS2P43631 304 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 DYNLT3P51808 116 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 EMP1P54849 157 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 PAX9P55771 341 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 DLX6P56179 175 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 NDUFV3P56181 108 aaKnown RBP4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 TAS2R45P59539 299 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 RPS24P62847 133 aaKnown RBP4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 RPL8P62917 257 aaKnown RBP4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 FKBP1AP62942 108 aaKnown RBP4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 CX3CL1P78423 397 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 MRPS6P82932 125 aaKnown RBP4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 TAF10Q12962 218 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 CATR1Q13166 79 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 OR1Q1Q15612 314 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 SLC25A53Q5H9E4 307 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 RNASEKQ6P5S7 137 aaKnown RBP4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 MORN3Q6PF18 240 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 Q6ZUT4 128 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 DOK3Q7L591 496 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 WDR5BQ86VZ2 330 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 LRRC25Q8N386 305 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 LILRA3Q8N6C8 439 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 ZNF645Q8N7E2 425 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 RBMXL3Q8N7X1 1067 aaKnown RBP4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 C1orf162Q8NEQ5 155 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 OR5D13Q8NGL4 314 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 OR10J6PQ8NGY7 276 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 OR51H1Q8NH63 302 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 WIPF2Q8TF74 440 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 TMEM171Q8WVE6 324 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 MSI2Q96DH6 328 aaKnown RBP4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 Q96M85 177 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 PAAF1Q9BRP4 392 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 ATG10Q9H0Y0 220 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 ZNF665Q9H7R5 613 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 THAP10Q9P2Z0 257 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 RARRES3Q9UL19 164 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 LINC00312Q9Y6C7 94 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 BRWD3Q6RI45 1802 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 CASP8AP2Q9UKL3 1982 aa4.02□□□□□ -1.77
HMGB1P19-201ENST00000517578 SPAARA0A1B0GVQ0 90 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 C5orf49A4QMS7 147 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 FAM24AA6NFZ4 105 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 NPIPB5A8MRT5 1133 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 TMEM14DPA8MWL7 114 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 C9JCJ5 164 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 SDCBPO00560 298 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 SOCS1O15524 211 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 EPPINO95925 133 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 ATP5G1P05496 136 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 ORM2P19652 201 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 BLVRBP30043 206 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 PTGDSP41222 190 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 IER3P46695 156 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 ATP5G3P48201 142 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 ZNF133P52736 654 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 ZNF121P58317 390 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 ATP5G2Q06055 141 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 MEF2CQ06413 473 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 CXCL9Q07325 125 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 HES1Q14469 280 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 ZNF146Q15072 292 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 TNXAQ16473 311 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 TAL2Q16559 108 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 SGCBQ16585 318 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 CCL15Q16663 113 aa4.01□□□□□ -1.77
HMGB1P19-201ENST00000517578 CEACAM16Q2WEN9 425 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms