RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 ST6GALNAC3Q8NDV1 305 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 KLHL30-AS1Q8NEE0 82 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC30A7Q8NEW0 376 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 NUP35Q8NFH5 326 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TSTD1Q8NFU3 115 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR2M3Q8NG83 312 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR10G2Q8NGC3 310 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR4K5Q8NGD3 323 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR51T1Q8NGJ9 327 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR13C8Q8NGS7 320 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR9A2Q8NGT5 310 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR2T27Q8NH04 317 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR52P1PQ8NH57 321 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 RPS4Y2Q8TD47 263 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 GPR119Q8TDV5 335 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 C15orf40Q8WUR7 153 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 THEM6Q8WUY1 208 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 GTSF1Q8WW33 167 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ACOT12Q8WYK0 555 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR5P3Q8WZ94 311 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 HIST1H2BHQ93079 126 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ARL11Q969Q4 196 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM106AQ96A25 262 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 APOBEC3DQ96AK3 386 aaPredicted RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TOMM6Q96B49 74 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 RPUSD4Q96CM3 377 aaKnown RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ISOC1Q96CN7 298 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CMBLQ96DG6 245 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 RMI2Q96E14 147 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ADAT3Q96EY9 351 aaPredicted RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 PHYHIPLQ96FC7 376 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 PDXPQ96GD0 296 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 C16orf74Q96GX8 76 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 REEP6Q96HR9 211 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF414Q96IQ9 312 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ABHD14BQ96IU4 210 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 C2orf50Q96LR7 162 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 LINC00477Q96M19 166 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 C1orf147Q96MC9 270 aaPredicted RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 FOPNLQ96NB1 174 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CCDC115Q96NT0 180 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 DERL3Q96Q80 235 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR2M2Q96R28 347 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR52B2Q96RD2 323 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF382Q96SR6 550 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 NRTNQ99748 197 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 SPIN2AQ99865 258 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 HIST1H2BNQ99877 126 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 HIST1H2BMQ99879 126 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 SPIN2BQ9BPZ2 258 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TBL1YQ9BQ87 522 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 VPS25Q9BRG1 176 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CHCHD7Q9BUK0 85 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CHAC1Q9BUX1 264 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 C1orf50Q9BV19 199 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 GGACTQ9BVM4 153 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 RTL8AQ9BWD3 113 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 GGTLC1Q9BX51 225 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF471Q9BX82 626 aaPredicted RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 C1QTNF6Q9BXI9 259 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 NKX6-2Q9C056 277 aaPredicted RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF436Q9C0F3 470 aaPredicted RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR2J1Q9GZK6 312 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 C20orf27Q9GZN8 174 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 IMUPQ9GZP8 106 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 WDR61Q9GZS3 305 aaKnown RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 FGF23Q9GZV9 251 aaPredicted RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM222Q9H0R3 208 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 RNASE7Q9H1E1 156 aaKnown RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 RPP21Q9H633 154 aaKnown RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 PLEKHF2Q9H8W4 249 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 PDFQ9HBH1 243 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 XAGE1AQ9HD64 81 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 RPS10P5Q9NQ39 176 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 GPR84Q9NQS5 396 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF331Q9NQX6 463 aaPredicted RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 DAZ1Q9NQZ3 744 aaKnown RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 DAZ3Q9NR90 486 aaKnown RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 C8orf17Q9NRJ1 99 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CA10Q9NS85 328 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 UQCC1Q9NVA1 299 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM38BQ9NVV0 291 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 FBXL12Q9NXK8 326 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TVP23BQ9NYZ1 205 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 CALML5Q9NZT1 146 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF492Q9P255 531 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 DEC1Q9P2X7 70 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 RPS6KB2Q9UBS0 482 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 HSPB8Q9UJY1 196 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TBX21Q9UL17 535 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 MCTS1Q9ULC4 181 aaKnown RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 ANAPC10Q9UM13 185 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 PKIGQ9Y2B9 76 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 LAMTOR2Q9Y2Q5 125 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 KLK5Q9Y337 293 aaPredicted RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 MED31Q9Y3C7 131 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 MRPS16Q9Y3D3 137 aaKnown RBP0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM14AQ9Y6G1 99 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 PXMP4Q9Y6I8 212 aa0.41□□□□□ -2.34
RNU4-54P-201ENST00000516428 KDM5BQ9UGL1 1544 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms