RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 SLC25A42Q86VD7 318 aa8.67□□□□□ -1.02
SCARNA16.1-201ENST00000516133 PUSL1Q8N0Z8 303 aaKnown RBP8.67□□□□□ -1.02
SCARNA16.1-201ENST00000516133 OR4A5Q8NH83 315 aa8.67□□□□□ -1.02
SCARNA16.1-201ENST00000516133 TMEM167AQ8TBQ9 72 aa8.67□□□□□ -1.02
SCARNA16.1-201ENST00000516133 MRAPQ8TCY5 172 aa8.67□□□□□ -1.02
SCARNA16.1-201ENST00000516133 SORL1Q92673 2214 aa8.67□□□□□ -1.02
SCARNA16.1-201ENST00000516133 GPHA2Q96T91 129 aa8.67□□□□□ -1.02
SCARNA16.1-201ENST00000516133 TINAGL1Q9GZM7 467 aaPredicted RBP8.67□□□□□ -1.02
SCARNA16.1-201ENST00000516133 PLEKHA2Q9HB19 425 aa8.67□□□□□ -1.02
SCARNA16.1-201ENST00000516133 RANGRFQ9HD47 186 aaPredicted RBP8.67□□□□□ -1.02
SCARNA16.1-201ENST00000516133 COA4Q9NYJ1 87 aa8.67□□□□□ -1.02
SCARNA16.1-201ENST00000516133 EXTL2Q9UBQ6 330 aa8.67□□□□□ -1.02
SCARNA16.1-201ENST00000516133 GPR31O00270 319 aa8.66□□□□□ -1.02
SCARNA16.1-201ENST00000516133 RGS5O15539 181 aa8.66□□□□□ -1.02
SCARNA16.1-201ENST00000516133 PGLYRP1O75594 196 aaPredicted RBP8.66□□□□□ -1.02
SCARNA16.1-201ENST00000516133 IGHV3-11P01762 117 aa8.66□□□□□ -1.02
SCARNA16.1-201ENST00000516133 NQO2P16083 231 aa8.66□□□□□ -1.02
SCARNA16.1-201ENST00000516133 KRTAP10-11P60412 298 aa8.66□□□□□ -1.02
SCARNA16.1-201ENST00000516133 RPL8P62917 257 aaKnown RBP8.66□□□□□ -1.02
SCARNA16.1-201ENST00000516133 DGCR2P98153 550 aa8.66□□□□□ -1.02
SCARNA16.1-201ENST00000516133 SPCS2Q15005 226 aa8.66□□□□□ -1.02
SCARNA16.1-201ENST00000516133 VAX1Q5SQQ9 334 aa8.66□□□□□ -1.02
SCARNA16.1-201ENST00000516133 TTC9CQ8N5M4 171 aa8.66□□□□□ -1.02
SCARNA16.1-201ENST00000516133 ADAD2Q8NCV1 583 aaKnown RBP8.66□□□□□ -1.02
SCARNA16.1-201ENST00000516133 OR51H1Q8NH63 302 aa8.66□□□□□ -1.02
SCARNA16.1-201ENST00000516133 FCAMRQ8WWV6 532 aa8.66□□□□□ -1.02
SCARNA16.1-201ENST00000516133 ALX4Q9H161 411 aaPredicted RBP8.66□□□□□ -1.02
SCARNA16.1-201ENST00000516133 BET1LQ9NYM9 111 aa8.66□□□□□ -1.02
SCARNA16.1-201ENST00000516133 CTDSP2O14595 271 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 OVOL1O14753 267 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 NOL3O60936 208 aaKnown RBP8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 IFNA6P05013 189 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 FGF2P09038 288 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 APELAP0DMC3 54 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 HLA-GP17693 338 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 TBPP20226 339 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 ZP3P21754 424 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 F2RP25116 425 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 RPL27AP46776 148 aaKnown RBP8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 UCP3P55916 312 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 POU2AF1Q16633 256 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 OR4A47Q6IF82 309 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 SSX9Q7RTT3 188 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 ZNF429Q86V71 674 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 DCUN1D4Q92564 292 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 DGCR14Q96DF8 476 aaKnown RBP8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 ABHD1Q96SE0 405 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 HRASLSQ9HDD0 168 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 SLC2A9Q9NRM0 540 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 COMMD9Q9P000 198 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 RABL2AQ9UBK7 228 aaPredicted RBP8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 KLK11Q9UBX7 282 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 MTFP1Q9UDX5 166 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 SCOCQ9UIL1 159 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 RABL2BQ9UNT1 228 aa8.65□□□□□ -1.02
SCARNA16.1-201ENST00000516133 IGHV4OR15-8A0A075B7B6 117 aa8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 A0A087WW49 117 aa8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 DPPA5A6NC42 116 aa8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 FAM223BA6NKX1 122 aa8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 DHFRP00374 187 aa8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 RLN1P04808 185 aa8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 IL6RP08887 468 aaPredicted RBP8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 MRPS10P82664 201 aaKnown RBP8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 DCTN2Q13561 401 aaKnown RBP8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 RNASE10Q5GAN6 216 aaKnown RBP8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 DEFB121Q5J5C9 76 aa8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 C10orf55Q5SWW7 151 aa8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 ZNF343Q6P1L6 599 aa8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 FAM223AQ8IWN6 122 aa8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 SLC38A6Q8IZM9 456 aa8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 CADM3Q8N126 398 aa8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 ARRDC1Q8N5I2 433 aa8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 NECAP1Q8NC96 275 aa8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 OR52I2Q8NH67 350 aa8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 DYNC2LI1Q8TCX1 351 aa8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 DLX4Q92988 240 aaPredicted RBP8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 MIXL1Q9H2W2 232 aa8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 FAM212BQ9NTI7 297 aaPredicted RBP8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 CCDC59Q9P031 241 aaKnown RBP8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 ZNF257Q9Y2Q1 563 aa8.64□□□□□ -1.03
SCARNA16.1-201ENST00000516133 TRBV9A0A0B4J1U6 114 aa8.63□□□□□ -1.03
SCARNA16.1-201ENST00000516133 WI2-2373I1.2A0A1W2PRP0 233 aa8.63□□□□□ -1.03
SCARNA16.1-201ENST00000516133 NPIPB5A8MRT5 1133 aa8.63□□□□□ -1.03
SCARNA16.1-201ENST00000516133 TEX22C9J3V5 150 aa8.63□□□□□ -1.03
SCARNA16.1-201ENST00000516133 GABARAPH6UMI1 98 aa8.63□□□□□ -1.03
SCARNA16.1-201ENST00000516133 K7EIL1 84 aa8.63□□□□□ -1.03
SCARNA16.1-201ENST00000516133 UPK2O00526 184 aa8.63□□□□□ -1.03
SCARNA16.1-201ENST00000516133 ZNF735P0CB33 412 aa8.63□□□□□ -1.03
SCARNA16.1-201ENST00000516133 SLURP1P55000 103 aa8.63□□□□□ -1.03
SCARNA16.1-201ENST00000516133 ERVK-16P61578 105 aa8.63□□□□□ -1.03
SCARNA16.1-201ENST00000516133 RHOGP84095 191 aa8.63□□□□□ -1.03
SCARNA16.1-201ENST00000516133 SSBP1Q04837 148 aaKnown RBP8.63□□□□□ -1.03
SCARNA16.1-201ENST00000516133 ATP5G2Q06055 141 aa8.63□□□□□ -1.03
SCARNA16.1-201ENST00000516133 TATDN3Q17R31 274 aa8.63□□□□□ -1.03
SCARNA16.1-201ENST00000516133 FAM209BQ5JX69 171 aa8.63□□□□□ -1.03
SCARNA16.1-201ENST00000516133 DMBX1Q8NFW5 382 aa8.63□□□□□ -1.03
SCARNA16.1-201ENST00000516133 FYTTD1Q96QD9 318 aaKnown RBP8.63□□□□□ -1.03
SCARNA16.1-201ENST00000516133 SRSF8Q9BRL6 282 aaKnown RBP8.63□□□□□ -1.03
SCARNA16.1-201ENST00000516133 RSRP1Q9BUV0 290 aa8.63□□□□□ -1.03
SCARNA16.1-201ENST00000516133 COMMD5Q9GZQ3 224 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms