RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	RAB5C	P51148	216 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PRRX1	P54821	245 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	SPCS3	P61009	180 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	HSPE1	P61604	102 aa	Known RBP	3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	GNB2	P62879	340 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	HBG1	P69891	147 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	HBG2	P69892	147 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	BLOC1S1	P78537	153 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TMEM267	Q0VDI3	215 aa	Predicted RBP	3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	DIAPH2-AS1	Q14236	149 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	CLINT1	Q14677	625 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	ATP6V1F	Q16864	119 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	RTL8B	Q17RB0	113 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	HLA-DRB5	Q30154	266 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	ANKRD39	Q53RE8	183 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	SPANXN5	Q5MJ07	72 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OR4A47	Q6IF82	309 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	BTNL8	Q6UX41	500 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	C1orf122	Q6ZSJ8	110 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	SSX9	Q7RTT3	188 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PDPN	Q86YL7	162 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	VKORC1L1	Q8N0U8	176 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PUSL1	Q8N0Z8	303 aa	Known RBP	3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	ZNF525	Q8N782	197 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TMEM217	Q8N7C4	229 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854		Q8N7P7	452 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	HSD17B11	Q8NBQ5	300 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	BEND2	Q8NDZ0	799 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OR13D1	Q8NGV5	346 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OR10X1	Q8NGY0	326 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OR4A16	Q8NH70	328 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	LYPD6B	Q8NI32	183 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OSR1	Q8TAX0	266 aa	Predicted RBP	3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	LHX4	Q969G2	390 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	MARC2	Q969Z3	335 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	GNPNAT1	Q96EK6	184 aa	Predicted RBP	3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OR4C12	Q96R67	309 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	SSBP3	Q9BWW4	388 aa	Predicted RBP	3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	CLEC7A	Q9BXN2	247 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	MRPL18	Q9H0U6	180 aa	Known RBP	3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PARP11	Q9NR21	331 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TMEM14B	Q9NUH8	114 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	BET1L	Q9NYM9	111 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	FOXA2	Q9Y261	457 aa	Predicted RBP	3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	STRAP	Q9Y3F4	350 aa	Known RBP	3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	KIAA2026	Q5HYC2	2103 aa		3.64	□□□□□ -1.83
ATP2C1-223	ENST00000515854	ARFGEF3	Q5TH69	2177 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	ANKHD1	Q8IWZ3	2542 aa	Known RBP	3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PCNX1	Q96RV3	2341 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	C15orf62	A8K5M9	175 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	UMAD1	C9J7I0	102 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	KRBOX1	C9JBD0	128 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	LY6L	H3BQJ8	138 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TEX46	H3BTG2	121 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TRIM77	I1YAP6	450 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854		I3L521	148 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	SHOX	O15266	292 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	RBMXL2	O75526	392 aa	Known RBP	3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	KBTBD11	O94819	623 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	IFNA5	P01569	189 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	IFNA17	P01571	189 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	IGLV2-23	P01705	113 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	IGHV2-5	P01817	119 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	IGHV4-39	P01824	125 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	SAA1	P0DJI8	122 aa	Predicted RBP	3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	MDK	P21741	143 aa	Predicted RBP	3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PRTN3	P24158	256 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	LGALS7	P47929	136 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	REG1B	P48304	166 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	RAB13	P51153	203 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OR2B8P	P59922	312 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	LMO4	P61968	165 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	RPP30	P78346	268 aa	Known RBP	3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PAX2	Q02962	417 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	SRSF1	Q07955	248 aa	Known RBP eCLIP	3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	SLC38A11	Q08AI6	406 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PJVK	Q0ZLH3	352 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	VWC2	Q2TAL6	325 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	LRRC75B	Q2VPJ9	315 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	SPINK9	Q5DT21	86 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TOR2A	Q5JU69	321 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PXDC1	Q5TGL8	231 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	SP5	Q6BEB4	398 aa	Predicted RBP	3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	HCP5	Q6MZN7	132 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	UQCC3	Q6UW78	93 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	IL34	Q6ZMJ4	242 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TMEM182	Q6ZP80	229 aa	Predicted RBP	3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854		Q6ZRG5	221 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854		Q6ZS46	218 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	CENPV	Q7Z7K6	275 aa	Predicted RBP	3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TGIF2LX	Q8IUE1	241 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	KIR3DL3	Q8N743	410 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OR11H6	Q8NGC7	330 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OR10P1	Q8NGE3	313 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OR4P4	Q8NGL7	312 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OR4C13	Q8NGP0	309 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OR2G3	Q8NGZ4	309 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OR4A5	Q8NH83	315 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TMEM167A	Q8TBQ9	72 aa		3.63	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PINX1	Q96BK5	328 aa	Known RBP	3.63	□□□□□ -1.83

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms