RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 ZNHIT1O43257 154 aa11.37□□□□□ -0.59
TCOF1-214ENST00000515035 SNAI3Q3KNW1 292 aa11.37□□□□□ -0.59
TCOF1-214ENST00000515035 ZNF826PQ6ZT77 177 aa11.37□□□□□ -0.59
TCOF1-214ENST00000515035 GOLT1AQ6ZVE7 132 aa11.37□□□□□ -0.59
TCOF1-214ENST00000515035 GATAD1Q8WUU5 269 aa11.37□□□□□ -0.59
TCOF1-214ENST00000515035 FTH1P19P0C7X4 201 aa11.36□□□□□ -0.59
TCOF1-214ENST00000515035 MEF2CQ06413 473 aaPredicted RBP11.36□□□□□ -0.59
TCOF1-214ENST00000515035 GCSAMLQ5JQS6 135 aa11.36□□□□□ -0.59
TCOF1-214ENST00000515035 DCAF10Q5QP82 559 aa11.36□□□□□ -0.59
TCOF1-214ENST00000515035 FAM19A2Q8N3H0 131 aa11.36□□□□□ -0.59
TCOF1-214ENST00000515035 SYT8Q8NBV8 401 aa11.36□□□□□ -0.59
TCOF1-214ENST00000515035 SDF2L1Q9HCN8 221 aa11.36□□□□□ -0.59
TCOF1-214ENST00000515035 LOXL3P58215 753 aa11.36□□□□□ -0.59
TCOF1-214ENST00000515035 MRPL32Q9BYC8 188 aaKnown RBP11.36□□□□□ -0.59
TCOF1-214ENST00000515035 MEGF9Q9H1U4 602 aa11.36□□□□□ -0.59
TCOF1-214ENST00000515035 A0A0G2JK05 382 aa11.36□□□□□ -0.59
TCOF1-214ENST00000515035 SP9P0CG40 484 aa11.36□□□□□ -0.59
TCOF1-214ENST00000515035 UCP2P55851 309 aa11.36□□□□□ -0.59
TCOF1-214ENST00000515035 CCL8P80075 99 aa11.36□□□□□ -0.59
TCOF1-214ENST00000515035 TRBV20OR9-2A0A075B6H5 130 aa11.36□□□□□ -0.59
TCOF1-214ENST00000515035 TRAV14DV4A0A0A6YYC5 116 aa11.36□□□□□ -0.59
TCOF1-214ENST00000515035 ODAMA1E959 279 aa11.36□□□□□ -0.59
TCOF1-214ENST00000515035 DNAL4O96015 105 aa11.36□□□□□ -0.59
TCOF1-214ENST00000515035 RELQ04864 619 aaPredicted RBP11.36□□□□□ -0.59
TCOF1-214ENST00000515035 C19orf48Q6RUI8 117 aa11.36□□□□□ -0.59
TCOF1-214ENST00000515035 PKIBQ9C010 78 aa11.36□□□□□ -0.59
TCOF1-214ENST00000515035 ATAD5Q96QE3 1844 aa11.36□□□□□ -0.59
TCOF1-214ENST00000515035 C17orf51A8MQB3 221 aa11.35□□□□□ -0.59
TCOF1-214ENST00000515035 FOXL2P58012 376 aa11.35□□□□□ -0.59
TCOF1-214ENST00000515035 SLC25A53Q5H9E4 307 aa11.35□□□□□ -0.59
TCOF1-214ENST00000515035 COPS9Q8WXC6 57 aa11.35□□□□□ -0.59
TCOF1-214ENST00000515035 H3BUT2 72 aa11.35□□□□□ -0.59
TCOF1-214ENST00000515035 MEIG1Q5JSS6 88 aa11.35□□□□□ -0.59
TCOF1-214ENST00000515035 ZNF324BQ6AW86 544 aaPredicted RBP11.35□□□□□ -0.59
TCOF1-214ENST00000515035 DRAM1Q8N682 238 aa11.35□□□□□ -0.59
TCOF1-214ENST00000515035 SPSB2Q99619 263 aa11.35□□□□□ -0.59
TCOF1-214ENST00000515035 NPCDR1Q9BY65 106 aa11.35□□□□□ -0.59
TCOF1-214ENST00000515035 IGKV3D-15A0A087WSY6 115 aa11.35□□□□□ -0.59
TCOF1-214ENST00000515035 SS18L1O75177 396 aaPredicted RBP11.35□□□□□ -0.59
TCOF1-214ENST00000515035 SERF1AO75920 110 aa11.35□□□□□ -0.59
TCOF1-214ENST00000515035 TBX6O95947 436 aaPredicted RBP11.35□□□□□ -0.59
TCOF1-214ENST00000515035 IGKV3-15P01624 115 aa11.35□□□□□ -0.59
TCOF1-214ENST00000515035 TYMSP04818 313 aa11.35□□□□□ -0.59
TCOF1-214ENST00000515035 UBE2CO00762 179 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 APOHP02749 345 aaPredicted RBP11.34□□□□□ -0.59
TCOF1-214ENST00000515035 CLDND2Q8NHS1 167 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 CALYQ9NYX4 217 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 JKAMPQ9P055 326 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 TMEM229AB2RXF0 380 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 MBD3L1Q8WWY6 194 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 GPR82Q96P67 336 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 METTL26Q96S19 204 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 NRN1Q9NPD7 142 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 GPX4P36969 197 aaPredicted RBP11.34□□□□□ -0.59
TCOF1-214ENST00000515035 SAPCD1Q5SSQ6 148 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.34□□□□□ -0.59
TCOF1-214ENST00000515035 EBLN2Q6P2I7 272 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 NPIPB3Q92617 1050 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 UBTD1Q9HAC8 227 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 ERGP11308 486 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 TFPI2P48307 235 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 PSG9Q00887 426 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 MESP2Q0VG99 397 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 VKORC1L1Q8N0U8 176 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 KIR2DL4Q99706 377 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 PILRBQ9UKJ0 227 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 PILRAQ9UKJ1 303 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 TRIOBPQ9H2D6 2365 aa11.34□□□□□ -0.59
TCOF1-214ENST00000515035 IGKV1D-42A0A075B6H8 117 aa11.33□□□□□ -0.59
TCOF1-214ENST00000515035 ATXN7O15265 892 aaPredicted RBP11.33□□□□□ -0.59
TCOF1-214ENST00000515035 HIST1H2BKO60814 126 aa11.33□□□□□ -0.59
TCOF1-214ENST00000515035 HIST1H2BJP06899 126 aa11.33□□□□□ -0.59
TCOF1-214ENST00000515035 HIST1H2BOP23527 126 aa11.33□□□□□ -0.59
TCOF1-214ENST00000515035 HIST1H2BBP33778 126 aa11.33□□□□□ -0.59
TCOF1-214ENST00000515035 HIST1H2BDP58876 126 aa11.33□□□□□ -0.59
TCOF1-214ENST00000515035 HIST1H2BCP62807 126 aa11.33□□□□□ -0.59
TCOF1-214ENST00000515035 HIST2H2BEQ16778 126 aa11.33□□□□□ -0.59
TCOF1-214ENST00000515035 FBLN7Q53RD9 439 aa11.33□□□□□ -0.59
TCOF1-214ENST00000515035 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.33□□□□□ -0.59
TCOF1-214ENST00000515035 SAXO1Q8IYX7 474 aa11.33□□□□□ -0.59
TCOF1-214ENST00000515035 HIST1H2BHQ93079 126 aa11.33□□□□□ -0.59
TCOF1-214ENST00000515035 C5orf30Q96GV9 206 aa11.33□□□□□ -0.59
TCOF1-214ENST00000515035 HIST1H2BNQ99877 126 aa11.33□□□□□ -0.59
TCOF1-214ENST00000515035 HIST1H2BMQ99879 126 aa11.33□□□□□ -0.59
TCOF1-214ENST00000515035 GFRA3O60609 400 aa11.33□□□□□ -0.6
TCOF1-214ENST00000515035 IL6RP08887 468 aaPredicted RBP11.33□□□□□ -0.6
TCOF1-214ENST00000515035 LDLRAD2Q5SZI1 272 aa11.33□□□□□ -0.6
TCOF1-214ENST00000515035 DYNLRB2Q8TF09 96 aa11.33□□□□□ -0.6
TCOF1-214ENST00000515035 TMEM170AQ8WVE7 144 aa11.33□□□□□ -0.6
TCOF1-214ENST00000515035 PRELID3AQ96N28 172 aa11.33□□□□□ -0.6
TCOF1-214ENST00000515035 WDR90Q96KV7 1748 aa11.33□□□□□ -0.6
TCOF1-214ENST00000515035 NDUFS8O00217 210 aa11.33□□□□□ -0.6
TCOF1-214ENST00000515035 KLF4O43474 513 aa11.33□□□□□ -0.6
TCOF1-214ENST00000515035 C1orf174Q8IYL3 243 aa11.33□□□□□ -0.6
TCOF1-214ENST00000515035 NUDT11Q96G61 164 aa11.33□□□□□ -0.6
TCOF1-214ENST00000515035 TMEM106BQ9NUM4 274 aa11.33□□□□□ -0.6
TCOF1-214ENST00000515035 HILPDAQ9Y5L2 63 aa11.33□□□□□ -0.6
TCOF1-214ENST00000515035 IGHV3-48P01763 117 aa11.33□□□□□ -0.6
TCOF1-214ENST00000515035 SRSF3P84103 164 aaKnown RBP11.33□□□□□ -0.6
TCOF1-214ENST00000515035 TBR1Q16650 682 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms