RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 ALX4Q9H161 411 aaPredicted RBP8.55□□□□□ -1.04
UBE2D3-232ENST00000514755 FOXA2Q9Y261 457 aaPredicted RBP8.55□□□□□ -1.04
UBE2D3-232ENST00000514755 TNCP24821 2201 aa8.55□□□□□ -1.04
UBE2D3-232ENST00000514755 MEGF8Q7Z7M0 2845 aa8.55□□□□□ -1.04
UBE2D3-232ENST00000514755 NOTCH1P46531 2555 aa8.55□□□□□ -1.04
UBE2D3-232ENST00000514755 I3L521 148 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 M0QYG6 137 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 CCL24O00175 119 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 SULT1C2O00338 296 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 RGS5O15539 181 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 CNIH1O95406 144 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 MYOD1P15172 320 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 TAS2R46P59540 309 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 DEFA5Q01523 94 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 TMEM267Q0VDI3 215 aaPredicted RBP8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 MSMO1Q15800 293 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 TNXAQ16473 311 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 PRSS8Q16651 343 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 VMA21Q3ZAQ7 101 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 TMEM65Q6PI78 240 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 SSX9Q7RTT3 188 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 TEX45Q8NA69 505 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 ZBTB34Q8NCN2 500 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 OR5T1Q8NG75 326 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 OR51H1Q8NH63 302 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 C4orf3Q8WVX3 66 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 UBE2E2Q96LR5 201 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 SLIRPQ9GZT3 109 aaKnown RBP8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 ZNF430Q9H8G1 570 aaPredicted RBP8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 SCPEP1Q9HB40 452 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 PRELID3BQ9Y3B1 194 aa8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 PRKDCP78527 4128 aaKnown RBP8.54□□□□□ -1.04
UBE2D3-232ENST00000514755 DNAH3Q8TD57 4116 aa8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 MSGN1A6NI15 193 aa8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 E7EUB6 86 aa8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 IGHV3-11P01762 117 aa8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 SLC6A1P30531 599 aa8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 RCVRNP35243 200 aa8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 RAB25P57735 213 aa8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 HERV-K104P61576 105 aa8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 DGCR2P98153 550 aa8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 SPAG16Q8N0X2 631 aa8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 PUSL1Q8N0Z8 303 aaKnown RBP8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 TCTEX1D1Q8N7M0 179 aa8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 OR11H1Q8NG94 326 aa8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 OR6F1Q8NGZ6 308 aa8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 OR4S2Q8NH73 311 aa8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 SRSF12Q8WXF0 261 aaKnown RBP8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 BCL7BQ9BQE9 202 aa8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 TINAGL1Q9GZM7 467 aaPredicted RBP8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 CCDC59Q9P031 241 aaKnown RBP8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 SCOCQ9UIL1 159 aa8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 VSIG4Q9Y279 399 aa8.53□□□□□ -1.04
UBE2D3-232ENST00000514755 TRAV3A0A0B4J244 114 aa8.52□□□□□ -1.05
UBE2D3-232ENST00000514755 A0A1B0GW64 132 aa8.52□□□□□ -1.05
UBE2D3-232ENST00000514755 RBMXL2O75526 392 aaKnown RBP8.52□□□□□ -1.05
UBE2D3-232ENST00000514755 PGLYRP1O75594 196 aaPredicted RBP8.52□□□□□ -1.05
UBE2D3-232ENST00000514755 S1PR2O95136 353 aa8.52□□□□□ -1.05
UBE2D3-232ENST00000514755 CD3DP04234 171 aa8.52□□□□□ -1.05
UBE2D3-232ENST00000514755 RLN1P04808 185 aa8.52□□□□□ -1.05
UBE2D3-232ENST00000514755 HOXD3P31249 432 aaPredicted RBP8.52□□□□□ -1.05
UBE2D3-232ENST00000514755 MECP2P51608 486 aaKnown RBP8.52□□□□□ -1.05
UBE2D3-232ENST00000514755 TPPP2P59282 170 aa8.52□□□□□ -1.05
UBE2D3-232ENST00000514755 KRTAP10-11P60412 298 aa8.52□□□□□ -1.05
UBE2D3-232ENST00000514755 FHL3Q13643 280 aa8.52□□□□□ -1.05
UBE2D3-232ENST00000514755 PDLIM3Q53GG5 364 aaPredicted RBP8.52□□□□□ -1.05
UBE2D3-232ENST00000514755 AADACL3Q5VUY0 350 aa8.52□□□□□ -1.05
UBE2D3-232ENST00000514755 POC5Q8NA72 575 aa8.52□□□□□ -1.05
UBE2D3-232ENST00000514755 OR4D10Q8NGI6 311 aa8.52□□□□□ -1.05
UBE2D3-232ENST00000514755 OR5M8Q8NGP6 311 aa8.52□□□□□ -1.05
UBE2D3-232ENST00000514755 C6orf62Q9GZU0 229 aaPredicted RBP8.52□□□□□ -1.05
UBE2D3-232ENST00000514755 RBM38Q9H0Z9 239 aaKnown RBP8.52□□□□□ -1.05
UBE2D3-232ENST00000514755 MTFP1Q9UDX5 166 aa8.52□□□□□ -1.05
UBE2D3-232ENST00000514755 IGHV4OR15-8A0A075B7B6 117 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 A0A087WW49 117 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 HMX3A6NHT5 357 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 KBTBD11O94819 623 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 OR2A4O95047 310 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 PRH1P02810 166 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 TRGV3P03979 118 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 RPA2P15927 270 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 KIR2DS2P43631 304 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 TSPAN5P62079 268 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 RUNX1Q01196 453 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 CATR1Q13166 79 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 PHLDA2Q53GA4 152 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 VAX1Q5SQQ9 334 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 OR4A47Q6IF82 309 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 C19orf35Q6ZS72 473 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 MMD2Q8IY49 270 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 OR1N2Q8NGR9 330 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 TMEM167AQ8TBQ9 72 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 DIRAS2Q96HU8 199 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 OR2A7Q96R45 310 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 PHB2Q99623 299 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 ZNF355PQ9NSJ1 428 aa8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 AURKAIP1Q9NWT8 199 aaPredicted RBP8.51□□□□□ -1.05
UBE2D3-232ENST00000514755 CCDC160A6NGH7 325 aa8.5□□□□□ -1.05
UBE2D3-232ENST00000514755 CGB1A6NKQ9 187 aa8.5□□□□□ -1.05
UBE2D3-232ENST00000514755 TEX22C9J3V5 150 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms