RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 MAGEB4O15481 346 aaPredicted RBP2.95□□□□□ -1.94
RFC1-216ENST00000514572 HPGDSO60760 199 aa2.95□□□□□ -1.94
RFC1-216ENST00000514572 SCGB1C2P0DMR2 95 aa2.95□□□□□ -1.94
RFC1-216ENST00000514572 COX6B1P14854 86 aa2.95□□□□□ -1.94
RFC1-216ENST00000514572 AKR1C4P17516 323 aa2.95□□□□□ -1.94
RFC1-216ENST00000514572 ATF1P18846 271 aa2.95□□□□□ -1.94
RFC1-216ENST00000514572 HSPA9P38646 679 aaKnown RBP2.95□□□□□ -1.94
RFC1-216ENST00000514572 IDH2P48735 452 aaKnown RBP2.95□□□□□ -1.94
RFC1-216ENST00000514572 CDC34P49427 236 aaPredicted RBP2.95□□□□□ -1.94
RFC1-216ENST00000514572 FAM53BQ14153 422 aa2.95□□□□□ -1.94
RFC1-216ENST00000514572 PYCR3Q53H96 274 aa2.95□□□□□ -1.94
RFC1-216ENST00000514572 XKRXQ6PP77 449 aa2.95□□□□□ -1.94
RFC1-216ENST00000514572 TBPL2Q6SJ96 375 aa2.95□□□□□ -1.94
RFC1-216ENST00000514572 IGFL3Q6UXB1 125 aa2.95□□□□□ -1.94
RFC1-216ENST00000514572 DPPA2Q7Z7J5 298 aa2.95□□□□□ -1.94
RFC1-216ENST00000514572 RIBC1Q8N443 379 aaPredicted RBP2.95□□□□□ -1.94
RFC1-216ENST00000514572 TMEM251Q8N6I4 163 aa2.95□□□□□ -1.94
RFC1-216ENST00000514572 SCGB1C1Q8TD33 95 aa2.95□□□□□ -1.94
RFC1-216ENST00000514572 CASTOR1Q8WTX7 329 aa2.95□□□□□ -1.94
RFC1-216ENST00000514572 CT55Q8WUE5 264 aa2.95□□□□□ -1.94
RFC1-216ENST00000514572 TWIST2Q8WVJ9 160 aa2.95□□□□□ -1.94
RFC1-216ENST00000514572 RBP7Q96R05 134 aa2.95□□□□□ -1.94
RFC1-216ENST00000514572 ANAPC13Q9BS18 74 aa2.95□□□□□ -1.94
RFC1-216ENST00000514572 ASF1BQ9NVP2 202 aa2.95□□□□□ -1.94
RFC1-216ENST00000514572 C14orf166Q9Y224 244 aaKnown RBP2.95□□□□□ -1.94
RFC1-216ENST00000514572 NCOA6Q14686 2063 aaPredicted RBP2.94□□□□□ -1.94
RFC1-216ENST00000514572 RPL36A-HNRNPH2H7BZ11 118 aa2.94□□□□□ -1.94
RFC1-216ENST00000514572 ZNF32P17041 273 aa2.94□□□□□ -1.94
RFC1-216ENST00000514572 CAPZBP47756 277 aa2.94□□□□□ -1.94
RFC1-216ENST00000514572 TPI1P60174 286 aa2.94□□□□□ -1.94
RFC1-216ENST00000514572 SLC36A2Q495M3 483 aa2.94□□□□□ -1.94
RFC1-216ENST00000514572 KPRPQ5T749 579 aaPredicted RBP2.94□□□□□ -1.94
RFC1-216ENST00000514572 NXNL2Q5VZ03 156 aa2.94□□□□□ -1.94
RFC1-216ENST00000514572 DNM1P34Q6PK57 102 aa2.94□□□□□ -1.94
RFC1-216ENST00000514572 SLC13A5Q86YT5 568 aaPredicted RBP2.94□□□□□ -1.94
RFC1-216ENST00000514572 FDCSPQ8NFU4 85 aa2.94□□□□□ -1.94
RFC1-216ENST00000514572 FAM172AQ8WUF8 416 aa2.94□□□□□ -1.94
RFC1-216ENST00000514572 POMPQ9Y244 141 aa2.94□□□□□ -1.94
RFC1-216ENST00000514572 NUP210LQ5VU65 1888 aa2.94□□□□□ -1.94
RFC1-216ENST00000514572 YLPM1P49750 1951 aaKnown RBP2.94□□□□□ -1.94
RFC1-216ENST00000514572 DNHD1Q96M86 4753 aa2.94□□□□□ -1.94
RFC1-216ENST00000514572 SNRNP200O75643 2136 aaKnown RBP2.93□□□□□ -1.94
RFC1-216ENST00000514572 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.93□□□□□ -1.949e-6■■□□□ 12.6
RFC1-216ENST00000514572 IGKV2-28A0A075B6P5 120 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 IGHV1-45A0A0A0MS14 117 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 TRAV40A0A0B4J280 105 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 TLCD2A6NGC4 264 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 CCRL2O00421 344 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 CDRT1O95170 752 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 KLHL2O95198 593 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 FSTL3O95633 263 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 IGKV2D-28P01615 120 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 CALB1P05937 261 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 GTF2F2P13984 249 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 GRPRP30550 384 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 ANP32AP39687 249 aaKnown RBP2.93□□□□□ -1.94
RFC1-216ENST00000514572 PAFAH1B3Q15102 231 aaKnown RBP2.93□□□□□ -1.94
RFC1-216ENST00000514572 CLEC12BQ2HXU8 276 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 PTRHD1Q6GMV3 140 aaKnown RBP2.93□□□□□ -1.94
RFC1-216ENST00000514572 SLC25A34Q6PIV7 304 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 Q6ZS92 163 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 DAZ4Q86SG3 579 aaKnown RBP2.93□□□□□ -1.94
RFC1-216ENST00000514572 OR8S1Q8NH09 359 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 CMTM5Q96DZ9 223 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 SMIM19Q96E16 107 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 COX14Q96I36 57 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 CHST5Q9GZS9 411 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 LRRC19Q9H756 370 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 DAZ1Q9NQZ3 744 aaKnown RBP2.93□□□□□ -1.94
RFC1-216ENST00000514572 DNAJC12Q9UKB3 198 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 ZNF835Q9Y2P0 537 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 SLC22A7Q9Y694 548 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 ZNF407Q9C0G0 2248 aa2.93□□□□□ -1.94
RFC1-216ENST00000514572 TINCRA0A1B0GVN0 87 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 SIGLEC16A6NMB1 481 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 IGLL5B9A064 214 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 SOD1P00441 154 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 CGB3P0DN86 165 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 CGB7P0DN87 165 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 COX5BP10606 129 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 CD99P14209 185 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 ZNF7P17097 686 aaPredicted RBP2.92□□□□□ -1.94
RFC1-216ENST00000514572 MP68P56378 58 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 RPL26P61254 145 aaKnown RBP2.92□□□□□ -1.94
RFC1-216ENST00000514572 ELP2Q6IA86 826 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 PPP1R2P3Q6NXS1 205 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 DCUN1D2Q6PH85 259 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 FAM131AQ6UXB0 335 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 NEGR1Q7Z3B1 354 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 FAM19A5Q7Z5A7 132 aaPredicted RBP2.92□□□□□ -1.94
RFC1-216ENST00000514572 VN1R4Q7Z5H5 301 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 TMEM144Q7Z5S9 345 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 OOSP2Q86WS3 158 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 ZNF615Q8N8J6 731 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 OR11L1Q8NGX0 322 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 DTD1Q8TEA8 209 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 SPANXB1Q9NS25 103 aaPredicted RBP2.92□□□□□ -1.94
RFC1-216ENST00000514572 RPL26L1Q9UNX3 145 aaKnown RBP2.92□□□□□ -1.94
RFC1-216ENST00000514572 BTRCQ9Y297 605 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 HRNRQ86YZ3 2850 aaPredicted RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms