RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 BBS2Q9BXC9 721 aa0.77□□□□□ -2.29
TRAPPC11-210ENST00000513600 NSRP1Q9H0G5 558 aaKnown RBP0.77□□□□□ -2.29
TRAPPC11-210ENST00000513600 WDR54Q9H977 334 aa0.77□□□□□ -2.29
TRAPPC11-210ENST00000513600 CHD2O14647 1828 aaKnown RBP0.77□□□□□ -2.29
TRAPPC11-210ENST00000513600 TECTAO75443 2155 aa0.77□□□□□ -2.29
TRAPPC11-210ENST00000513600 MYH11P35749 1972 aa0.76□□□□□ -2.29
TRAPPC11-210ENST00000513600 PCDH15Q96QU1 1955 aa0.76□□□□□ -2.29
TRAPPC11-210ENST00000513600 FABP12A6NFH5 140 aa0.76□□□□□ -2.29
TRAPPC11-210ENST00000513600 CCRL2O00421 344 aa0.76□□□□□ -2.29
TRAPPC11-210ENST00000513600 ITGB1BP1O14713 200 aa0.76□□□□□ -2.29
TRAPPC11-210ENST00000513600 CETN3O15182 167 aa0.76□□□□□ -2.29
TRAPPC11-210ENST00000513600 STX10O60499 249 aa0.76□□□□□ -2.29
TRAPPC11-210ENST00000513600 OCMP0CE72 109 aaPredicted RBP0.76□□□□□ -2.29
TRAPPC11-210ENST00000513600 PET100P0DJ07 73 aa0.76□□□□□ -2.29
TRAPPC11-210ENST00000513600 HIST1H1CP16403 213 aaKnown RBP0.76□□□□□ -2.29
TRAPPC11-210ENST00000513600 MSNP26038 577 aaKnown RBP0.76□□□□□ -2.29
TRAPPC11-210ENST00000513600 MIPP30301 263 aa0.76□□□□□ -2.29
TRAPPC11-210ENST00000513600 FKBP1AP62942 108 aaKnown RBP0.76□□□□□ -2.29
TRAPPC11-210ENST00000513600 CDK10Q15131 360 aa0.76□□□□□ -2.29
TRAPPC11-210ENST00000513600 DNM1P34Q6PK57 102 aa0.76□□□□□ -2.29
TRAPPC11-210ENST00000513600 SLC22A24Q8N4F4 322 aa0.76□□□□□ -2.29
TRAPPC11-210ENST00000513600 DCUN1D5Q9BTE7 237 aa0.76□□□□□ -2.29
TRAPPC11-210ENST00000513600 SPANXB1Q9NS25 103 aaPredicted RBP0.76□□□□□ -2.29
TRAPPC11-210ENST00000513600 EURLQ9NYK6 297 aa0.76□□□□□ -2.29
TRAPPC11-210ENST00000513600 TP53TG1Q9Y2A0 90 aa0.76□□□□□ -2.29
TRAPPC11-210ENST00000513600 ABCC12Q96J65 1359 aa0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 POLEQ07864 2286 aa0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 C5orf49A4QMS7 147 aa0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 OR51F1A6NGY5 319 aa0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 UBE2G2P60604 165 aa0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 RPL30P62888 115 aaKnown RBP0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 SKP1P63208 163 aa0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 MGAT3Q09327 533 aa0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 MED21Q13503 144 aa0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 HLA-DRB5Q30154 266 aa0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 SAPCD1Q5SSQ6 148 aa0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 PLEKHG7Q6ZR37 379 aa0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 CD302Q8IX05 232 aa0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 FAM9CQ8IZT9 166 aa0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 OTUD6BQ8N6M0 293 aa0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 C9orf163Q8N9P6 203 aa0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 OR8B3Q8NGG8 313 aa0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 PACRGQ96M98 296 aaPredicted RBP0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 MRPL57Q9BQC6 102 aaKnown RBP0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 C7orf50Q9BRJ6 194 aaKnown RBP0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 TIPINQ9BVW5 301 aa0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 SLC22A4Q9H015 551 aa0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 IMP3Q9NV31 184 aaKnown RBP0.75□□□□□ -2.29
TRAPPC11-210ENST00000513600 REREQ9P2R6 1566 aa0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 SCAF11Q99590 1463 aaKnown RBP0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 RIMS2Q9UQ26 1411 aa0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 PTPRBP23467 1997 aa0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 A0A0A6YYH2 397 aa0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 C1orf232A0A0U1RR37 186 aa0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 TEX50A0A1B0GTY4 177 aa0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 TINCRA0A1B0GVN0 87 aa0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 A6NJ64 397 aa0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 IBA57-AS1B1ANH7 110 aa0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 HPGDSO60760 199 aa0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 HAAOP46952 286 aa0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 HLA-DRB3P79483 266 aa0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 JOSD1Q15040 202 aaPredicted RBP0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 ACSM3Q53FZ2 586 aa0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 FAM19A5Q7Z5A7 132 aaPredicted RBP0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 FUNDC1Q8IVP5 155 aa0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 DNAJB3Q8WWF6 145 aa0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 SERPINI1Q99574 410 aa0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 HDHD2Q9H0R4 259 aa0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 PLEKHJ1Q9NW61 149 aa0.74□□□□□ -2.29
TRAPPC11-210ENST00000513600 SDCBPO00560 298 aaPredicted RBP0.73□□□□□ -2.29
TRAPPC11-210ENST00000513600 CD40LGP29965 261 aa0.73□□□□□ -2.29
TRAPPC11-210ENST00000513600 CLDN12P56749 244 aa0.73□□□□□ -2.29
TRAPPC11-210ENST00000513600 EBPQ15125 230 aaKnown RBP0.73□□□□□ -2.29
TRAPPC11-210ENST00000513600 C10orf55Q5SWW7 151 aa0.73□□□□□ -2.29
TRAPPC11-210ENST00000513600 FAM27BQ5VT28 67 aa0.73□□□□□ -2.29
TRAPPC11-210ENST00000513600 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.73□□□□□ -2.29
TRAPPC11-210ENST00000513600 RIBC1Q8N443 379 aaPredicted RBP0.73□□□□□ -2.29
TRAPPC11-210ENST00000513600 TMEM251Q8N6I4 163 aa0.73□□□□□ -2.29
TRAPPC11-210ENST00000513600 ZNF676Q8N7Q3 588 aa0.73□□□□□ -2.29
TRAPPC11-210ENST00000513600 ASB13Q8WXK3 278 aa0.73□□□□□ -2.29
TRAPPC11-210ENST00000513600 CMTM5Q96DZ9 223 aa0.73□□□□□ -2.29
TRAPPC11-210ENST00000513600 SMIM19Q96E16 107 aa0.73□□□□□ -2.29
TRAPPC11-210ENST00000513600 DHRS9Q9BPW9 319 aa0.73□□□□□ -2.29
TRAPPC11-210ENST00000513600 UPF3BQ9BZI7 483 aaKnown RBP0.73□□□□□ -2.29
TRAPPC11-210ENST00000513600 MS4A6AQ9H2W1 248 aa0.73□□□□□ -2.29
TRAPPC11-210ENST00000513600 EIF4G1Q04637 1599 aaKnown RBP0.73□□□□□ -2.29
TRAPPC11-210ENST00000513600 NAV1Q8NEY1 1877 aa0.73□□□□□ -2.29
TRAPPC11-210ENST00000513600 SETD5Q9C0A6 1442 aa0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 A0A1W2PP64 1363 aa0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 THSD7AQ9UPZ6 1657 aa0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 CHD5Q8TDI0 1954 aa0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 GOLGA8KD6RF30 607 aa0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 F5H768 121 aa0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 GOLGA8MH3BSY2 632 aa0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 BIRC5O15392 142 aa0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 SSNA1O43805 119 aa0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 TPM3P06753 285 aa0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 C8orf88P0DMB2 117 aa0.72□□□□□ -2.29
TRAPPC11-210ENST00000513600 UGT2B7P16662 529 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms