RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 A0A1W2PN81 502 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 ZG16O60844 167 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 MAS1LP35410 378 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 PSG4Q00888 419 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 ARTNQ5T4W7 220 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 TCF23Q7RTU1 214 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 ACACBO00763 2458 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 A0A1B0GWJ7 208 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 C17orf51A8MQB3 221 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 PROB1E7EW31 1015 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 CDIPTO14735 213 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 ATXN7O15265 892 aaPredicted RBP9.59□□□□□ -0.87
TCOF1-211ENST00000513346 ACP1P24666 158 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 RPL31P62899 125 aaKnown RBP9.59□□□□□ -0.87
TCOF1-211ENST00000513346 RPEQ96AT9 228 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 RAB37Q96AX2 223 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 VWA8A3KMH1 1905 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 C16orf97H3BN30 126 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 STAG3L2P0CL84 134 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 RND2P52198 227 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 KCNMB1Q16558 191 aa9.59□□□□□ -0.87
TCOF1-211ENST00000513346 RALYQ9UKM9 306 aaKnown RBP9.59□□□□□ -0.87
TCOF1-211ENST00000513346 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.58□□□□□ -0.88
TCOF1-211ENST00000513346 CRYBB3P26998 211 aa9.58□□□□□ -0.88
TCOF1-211ENST00000513346 RELBQ01201 579 aa9.58□□□□□ -0.88
TCOF1-211ENST00000513346 ZNF324BQ6AW86 544 aaPredicted RBP9.58□□□□□ -0.88
TCOF1-211ENST00000513346 INO80CQ6PI98 192 aaPredicted RBP9.58□□□□□ -0.88
TCOF1-211ENST00000513346 NCBP2LA6PVI3 153 aaKnown RBP9.58□□□□□ -0.88
TCOF1-211ENST00000513346 ORM2P19652 201 aa9.58□□□□□ -0.88
TCOF1-211ENST00000513346 NMUP48645 174 aa9.58□□□□□ -0.88
TCOF1-211ENST00000513346 DNM1P46Q6ZS02 220 aa9.58□□□□□ -0.88
TCOF1-211ENST00000513346 STXBP6Q8NFX7 210 aa9.58□□□□□ -0.88
TCOF1-211ENST00000513346 NPCDR1Q9BY65 106 aa9.58□□□□□ -0.88
TCOF1-211ENST00000513346 CCL21O00585 134 aa9.58□□□□□ -0.88
TCOF1-211ENST00000513346 RSPO3Q9BXY4 272 aaPredicted RBP9.58□□□□□ -0.88
TCOF1-211ENST00000513346 ABCA4P78363 2273 aa9.58□□□□□ -0.88
TCOF1-211ENST00000513346 IGKV1D-8A0A087WSZ0 117 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 A0A1W2PRS3 328 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 COX5BP10606 129 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 ZNF658BQ4V348 819 aaPredicted RBP9.57□□□□□ -0.88
TCOF1-211ENST00000513346 MTURNQ8N3F0 131 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 PCNTO95613 3336 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 OR4C46A6NHA9 309 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 CLDN14O95500 239 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 UMODP07911 640 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 GZMHP20718 246 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 GCHFRP30047 84 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 NPBWR2P48146 333 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 ATP5G3P48201 142 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 C10orf113Q5VZT2 155 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 SAXO1Q8IYX7 474 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 FAM19A2Q8N3H0 131 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 PRNDQ9UKY0 176 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 HEATR5BQ9P2D3 2071 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 SELLP14151 372 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 COX7A1P24310 79 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 CFPP27918 469 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 CENPWQ5EE01 88 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 ZNF645Q8N7E2 425 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 SLC25A40Q8TBP6 338 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 FAM216AQ8WUB2 273 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 NUDT11Q96G61 164 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 IGKV1-9A0A0C4DH69 117 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 IGHV3-13P01766 116 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 IGHV3-7P01780 117 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 C1QTNF9P0C862 333 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 OR4F17Q8NGA8 305 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 AAMDCQ9H7C9 122 aa9.57□□□□□ -0.88
TCOF1-211ENST00000513346 C1QTNF9BB2RNN3 333 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 CDX4O14627 284 aaPredicted RBP9.56□□□□□ -0.88
TCOF1-211ENST00000513346 TMPRSS2O15393 492 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 MRPS11P82912 194 aaKnown RBP9.56□□□□□ -0.88
TCOF1-211ENST00000513346 ACTL10Q5JWF8 245 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 MDP1Q86V88 176 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 MOGAT3Q86VF5 341 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 TMEM256Q8N2U0 113 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 MS4A5Q9H3V2 200 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 DLL3Q9NYJ7 618 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 IL36GQ9NZH8 169 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 TRAV9-2A0A087WT02 112 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 KRTCAP3Q53RY4 240 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 PAXXQ9BUH6 204 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 K7ESF4 209 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 SYNGR1O43759 233 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 OR2J3O76001 311 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 TIAF1O95411 115 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 UBE2V1Q13404 147 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 TEX38Q6PEX7 206 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 FAM214BQ7L5A3 538 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 ERASQ7Z444 233 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 DOLPP1Q86YN1 238 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 ORAOV1Q8WV07 137 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 ST6GALNAC6Q969X2 333 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 MYLKQ15746 1914 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 CENPFP49454 3210 aa9.56□□□□□ -0.88
TCOF1-211ENST00000513346 RFNGQ9Y644 331 aa9.55□□□□□ -0.88
TCOF1-211ENST00000513346 TGFBR3LH3BV60 316 aa9.55□□□□□ -0.88
TCOF1-211ENST00000513346 IGKV3-11P04433 115 aa9.55□□□□□ -0.88
TCOF1-211ENST00000513346 OR1B1Q8NGR6 318 aa9.55□□□□□ -0.88
TCOF1-211ENST00000513346 ZNF430Q9H8G1 570 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms