RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 EPHA1P21709 976 aa13.46□□□□□ -0.25
HMGCL-209ENST00000513148 PRAMEF5Q5TYX0 476 aa13.46□□□□□ -0.25
HMGCL-209ENST00000513148 RNASEH2CQ8TDP1 164 aaKnown RBP13.46□□□□□ -0.25
HMGCL-209ENST00000513148 GAL3ST2Q9H3Q3 398 aa13.46□□□□□ -0.25
HMGCL-209ENST00000513148 PLA2G2EQ9NZK7 142 aa13.46□□□□□ -0.25
HMGCL-209ENST00000513148 C17orf98A8MV24 154 aa13.46□□□□□ -0.26
HMGCL-209ENST00000513148 A8MWP6 167 aa13.46□□□□□ -0.26
HMGCL-209ENST00000513148 MMP23AO75900 390 aa13.46□□□□□ -0.26
HMGCL-209ENST00000513148 PRTN3P24158 256 aa13.46□□□□□ -0.26
HMGCL-209ENST00000513148 COX7A1P24310 79 aa13.46□□□□□ -0.26
HMGCL-209ENST00000513148 SSTR5P35346 364 aa13.46□□□□□ -0.26
HMGCL-209ENST00000513148 TMEM50BP56557 158 aa13.46□□□□□ -0.26
HMGCL-209ENST00000513148 PAX5Q02548 391 aa13.46□□□□□ -0.26
HMGCL-209ENST00000513148 SURF2Q15527 256 aaPredicted RBP13.46□□□□□ -0.26
HMGCL-209ENST00000513148 PLAC9Q5JTB6 97 aa13.46□□□□□ -0.26
HMGCL-209ENST00000513148 ZMAT3Q9HA38 289 aaKnown RBP13.46□□□□□ -0.26
HMGCL-209ENST00000513148 PLEKHA2Q9HB19 425 aa13.46□□□□□ -0.26
HMGCL-209ENST00000513148 TRAPPC2LQ9UL33 140 aa13.46□□□□□ -0.26
HMGCL-209ENST00000513148 FOXI3A8MTJ6 420 aaPredicted RBP13.45□□□□□ -0.26
HMGCL-209ENST00000513148 IGHV1-8P0DP01 117 aa13.45□□□□□ -0.26
HMGCL-209ENST00000513148 C1orf122Q6ZSJ8 110 aa13.45□□□□□ -0.26
HMGCL-209ENST00000513148 PNKDQ8N490 385 aa13.45□□□□□ -0.26
HMGCL-209ENST00000513148 UBALD1Q8TB05 177 aa13.45□□□□□ -0.26
HMGCL-209ENST00000513148 CORO2AQ92828 525 aa13.45□□□□□ -0.26
HMGCL-209ENST00000513148 TNFRSF14Q92956 283 aa13.45□□□□□ -0.26
HMGCL-209ENST00000513148 PECRQ9BY49 303 aa13.45□□□□□ -0.26
HMGCL-209ENST00000513148 SOX21Q9Y651 276 aaPredicted RBP13.45□□□□□ -0.26
HMGCL-209ENST00000513148 NAV3Q8IVL0 2385 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 TMEM235A6NFC5 223 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 LTC4SQ16873 150 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 MIDNQ504T8 468 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 CDPF1Q6NVV7 123 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 RFESDQ8TAC1 157 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 HDHD3Q9BSH5 251 aaPredicted RBP13.44□□□□□ -0.26
HMGCL-209ENST00000513148 CALYQ9NYX4 217 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 AK3Q9UIJ7 227 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 HIST1H2BKO60814 126 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 HIST1H2BJP06899 126 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 GNB3P16520 340 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 FGF7P21781 194 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 HIST1H2BOP23527 126 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 FPR2P25090 351 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 RPL12P30050 165 aaKnown RBP13.44□□□□□ -0.26
HMGCL-209ENST00000513148 HIST1H2BBP33778 126 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 HRH1P35367 487 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 HIST1H2BDP58876 126 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 HIST1H2BCP62807 126 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 RAB32Q13637 225 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 FAM189A2Q15884 450 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 HIST2H2BEQ16778 126 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 C17orf58Q2M2W7 97 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.44□□□□□ -0.26
HMGCL-209ENST00000513148 NCR3LG1Q68D85 454 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 TGIF2LXQ8IUE1 241 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 BCL6BQ8N143 479 aaPredicted RBP13.44□□□□□ -0.26
HMGCL-209ENST00000513148 PRR18Q8N4B5 295 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 HIST1H2BHQ93079 126 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 HIST1H2BNQ99877 126 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 HIST1H2BMQ99879 126 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 EIF5A2Q9GZV4 153 aaKnown RBP13.44□□□□□ -0.26
HMGCL-209ENST00000513148 HSF4Q9ULV5 492 aa13.44□□□□□ -0.26
HMGCL-209ENST00000513148 IGHV1-69DA0A0B4J2H0 117 aa13.43□□□□□ -0.26
HMGCL-209ENST00000513148 KBTBD11-OT1A0A1B0GTJ5 212 aa13.43□□□□□ -0.26
HMGCL-209ENST00000513148 K7EPK0 472 aa13.43□□□□□ -0.26
HMGCL-209ENST00000513148 IGHV1-69P01742 117 aa13.43□□□□□ -0.26
HMGCL-209ENST00000513148 JOSD1Q15040 202 aaPredicted RBP13.43□□□□□ -0.26
HMGCL-209ENST00000513148 KHDC3LQ587J8 217 aa13.43□□□□□ -0.26
HMGCL-209ENST00000513148 SOHLH1Q5JUK2 328 aa13.43□□□□□ -0.26
HMGCL-209ENST00000513148 FAM71E2Q8N5Q1 922 aa13.43□□□□□ -0.26
HMGCL-209ENST00000513148 MRPL30Q8TCC3 161 aaKnown RBP13.43□□□□□ -0.26
HMGCL-209ENST00000513148 RCC1LQ96I51 464 aaKnown RBP13.43□□□□□ -0.26
HMGCL-209ENST00000513148 GINS3Q9BRX5 216 aa13.43□□□□□ -0.26
HMGCL-209ENST00000513148 ACTR3CQ9C0K3 210 aaPredicted RBP13.43□□□□□ -0.26
HMGCL-209ENST00000513148 CA11O75493 328 aa13.42□□□□□ -0.26
HMGCL-209ENST00000513148 RBP4P02753 201 aa13.42□□□□□ -0.26
HMGCL-209ENST00000513148 HCP5Q6MZN7 132 aa13.42□□□□□ -0.26
HMGCL-209ENST00000513148 TMEM230Q96A57 120 aa13.42□□□□□ -0.26
HMGCL-209ENST00000513148 R3HDM4Q96D70 268 aa13.42□□□□□ -0.26
HMGCL-209ENST00000513148 SUCNR1Q9BXA5 334 aa13.42□□□□□ -0.26
HMGCL-209ENST00000513148 NCOR1P1Q9H4R4 102 aa13.42□□□□□ -0.26
HMGCL-209ENST00000513148 BORCS7-ASMTA0A0B4J1R7 106 aa13.42□□□□□ -0.26
HMGCL-209ENST00000513148 HIST1H1DP16402 221 aaKnown RBP13.42□□□□□ -0.26
HMGCL-209ENST00000513148 ELOBQ15370 118 aa13.42□□□□□ -0.26
HMGCL-209ENST00000513148 MARCH1Q8TCQ1 289 aa13.42□□□□□ -0.26
HMGCL-209ENST00000513148 C5orf66Q9H5L9 145 aa13.42□□□□□ -0.26
HMGCL-209ENST00000513148 B4DEV8 164 aa13.41□□□□□ -0.26
HMGCL-209ENST00000513148 IGHV3-7P01780 117 aa13.41□□□□□ -0.26
HMGCL-209ENST00000513148 CGB3P0DN86 165 aa13.41□□□□□ -0.26
HMGCL-209ENST00000513148 CGB7P0DN87 165 aa13.41□□□□□ -0.26
HMGCL-209ENST00000513148 UBE2E1P51965 193 aa13.41□□□□□ -0.26
HMGCL-209ENST00000513148 SCGB2A2Q13296 93 aa13.41□□□□□ -0.26
HMGCL-209ENST00000513148 C5orf24Q7Z6I8 188 aa13.41□□□□□ -0.26
HMGCL-209ENST00000513148 MRPL52Q86TS9 123 aaKnown RBP13.41□□□□□ -0.26
HMGCL-209ENST00000513148 GAPTQ8N292 157 aa13.41□□□□□ -0.26
HMGCL-209ENST00000513148 PIP4P2Q8N4L2 257 aa13.41□□□□□ -0.26
HMGCL-209ENST00000513148 CD300LFQ8TDQ1 290 aa13.41□□□□□ -0.26
HMGCL-209ENST00000513148 MDFIC2A0A1B0GVS7 189 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 C12orf77C9JDV5 145 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 DEDDO75618 318 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 PMP2P02689 132 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms