RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 CRPP02741 224 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 COX6CP09669 75 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 SSTR5P35346 364 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 SCN1AP35498 2009 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 ADIPOQQ15848 244 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 DRAM1Q8N682 238 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 SMIM8Q96KF7 97 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 SOSTQ9BQB4 213 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 SDF2L1Q9HCN8 221 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 NRN1Q9NPD7 142 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 TAF1LQ8IZX4 1826 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.58□□□□□ -1.84
VCAN-209ENST00000513016 TRAV41A0A0B4J266 112 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 NPIPB7O75200 414 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 ZNF253O75346 499 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 PLA2G5P39877 138 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 TNFRSF9Q07011 255 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 SRSF9Q13242 221 aaKnown RBP eCLIP3.58□□□□□ -1.84
VCAN-209ENST00000513016 UBE2V2Q15819 145 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 HIST3H3Q16695 136 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 TEX38Q6PEX7 206 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 ZNF841Q6ZN19 808 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 Q96MF0 132 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 DEPPQ9NTK1 212 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 ZNF638Q14966 1978 aaKnown RBP3.58□□□□□ -1.84
VCAN-209ENST00000513016 TRGV11A0A075B6L2 103 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 TRAV14DV4A0A0A6YYC5 116 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 M0R2Z0 102 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 CSN3P07498 182 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 NANOS3P60323 173 aaKnown RBP3.58□□□□□ -1.84
VCAN-209ENST00000513016 CFAP161Q6P656 301 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 SELENOHQ8IZQ5 122 aaKnown RBP3.58□□□□□ -1.84
VCAN-209ENST00000513016 OR1N2Q8NGR9 330 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 KCNE5Q9UJ90 142 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 BOLA1Q9Y3E2 137 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 SLC25A15Q9Y619 301 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 ADAMTSL1Q8N6G6 1762 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 MSMBP08118 114 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 SFTA3P0C7M3 94 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 CKS2P33552 79 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 INSL4Q14641 139 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 IRF3Q14653 427 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 PRSS8Q16651 343 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 TCF24Q7RTU0 167 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 WNT10AQ9GZT5 417 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 ARFGEF1Q9Y6D6 1849 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 ZNF236Q9UL36 1845 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 C12orf77C9JDV5 145 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 APCSP02743 223 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 GPX4P36969 197 aaPredicted RBP3.57□□□□□ -1.84
VCAN-209ENST00000513016 CRYBA2P53672 197 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 C3orf36Q3SXR2 165 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 ASPHD2Q6ICH7 369 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 TMEM252Q8N6L7 170 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 VAMP8Q9BV40 100 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 ATAD5Q96QE3 1844 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 MCM3APO60318 1980 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 IGHV3-11P01762 117 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 RCC1P18754 421 aaPredicted RBP3.57□□□□□ -1.84
VCAN-209ENST00000513016 Q0VFX4 171 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 USMG5Q96IX5 58 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 MARVELD1Q9BSK0 173 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 POLR2AP24928 1970 aaKnown RBP3.57□□□□□ -1.84
VCAN-209ENST00000513016 TRGV4A0A0C4DH28 118 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 C5orf52A6NGY3 159 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 RNF223E7ERA6 249 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 MT-ND6P03923 174 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 REG1AP05451 166 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 TGFBR1P36897 503 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 NPBWR2P48146 333 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 PEAR1Q5VY43 1037 aaPredicted RBP3.57□□□□□ -1.84
VCAN-209ENST00000513016 GTF2H5Q6ZYL4 71 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 LRP11Q86VZ4 500 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 TMEM37Q8WXS4 190 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 C2orf88Q9BSF0 95 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 MRPL20Q9BYC9 149 aaKnown RBP3.57□□□□□ -1.84
VCAN-209ENST00000513016 SLIRPQ9GZT3 109 aaKnown RBP3.57□□□□□ -1.84
VCAN-209ENST00000513016 GPR132Q9UNW8 380 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 ZNF257Q9Y2Q1 563 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 WNK3Q9BYP7 1800 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 TRIP11Q15643 1979 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 OVOL1O14753 267 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 AGAP20933 346 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 EGR4Q05215 589 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 MEIG1Q5JSS6 88 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 SPSB3Q6PJ21 355 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 TAF15Q92804 592 aaKnown RBP eCLIP3.57□□□□□ -1.84
VCAN-209ENST00000513016 AMELYQ99218 206 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 NEU1Q99519 415 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 PRADC1Q9BSG0 188 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 TM2D1Q9BX74 207 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 ZMAT4Q9H898 229 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 C7orf66A4D0T2 115 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 M0R143 59 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 AMBPP02760 352 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 HNRNPA3P51991 378 aaKnown RBP3.57□□□□□ -1.84
VCAN-209ENST00000513016 TCL1AP56279 114 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 ERVS71-1P61550 626 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 VMO1Q7Z5L0 202 aa3.57□□□□□ -1.84
VCAN-209ENST00000513016 PIP4P1Q86T03 277 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms