RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 CDK10Q15131 360 aa6.38□□□□□ -1.39
CLCN3-208ENST00000512813 RTL8BQ17RB0 113 aa6.38□□□□□ -1.39
CLCN3-208ENST00000512813 FDX2Q6P4F2 183 aa6.38□□□□□ -1.39
CLCN3-208ENST00000512813 SPSB3Q6PJ21 355 aa6.38□□□□□ -1.39
CLCN3-208ENST00000512813 FAM220AQ7Z4H9 259 aa6.38□□□□□ -1.39
CLCN3-208ENST00000512813 OR10G2Q8NGC3 310 aa6.38□□□□□ -1.39
CLCN3-208ENST00000512813 PTX4Q96A99 478 aa6.38□□□□□ -1.39
CLCN3-208ENST00000512813 GRAMD2BQ96HH9 432 aa6.38□□□□□ -1.39
CLCN3-208ENST00000512813 MRPS16Q9Y3D3 137 aaKnown RBP6.38□□□□□ -1.39
CLCN3-208ENST00000512813 E7EUB6 86 aa6.37□□□□□ -1.39
CLCN3-208ENST00000512813 ZNF735P0CB33 412 aa6.37□□□□□ -1.39
CLCN3-208ENST00000512813 SAA1P0DJI8 122 aaPredicted RBP6.37□□□□□ -1.39
CLCN3-208ENST00000512813 DEFA4P12838 97 aa6.37□□□□□ -1.39
CLCN3-208ENST00000512813 NUTF2P61970 127 aaKnown RBP6.37□□□□□ -1.39
CLCN3-208ENST00000512813 HACD2Q6Y1H2 254 aa6.37□□□□□ -1.39
CLCN3-208ENST00000512813 LRRTM1Q86UE6 522 aa6.37□□□□□ -1.39
CLCN3-208ENST00000512813 NFE4Q86UQ8 179 aa6.37□□□□□ -1.39
CLCN3-208ENST00000512813 OR10C1Q96KK4 312 aa6.37□□□□□ -1.39
CLCN3-208ENST00000512813 FEVQ99581 238 aa6.37□□□□□ -1.39
CLCN3-208ENST00000512813 TEX12Q9BXU0 123 aa6.37□□□□□ -1.39
CLCN3-208ENST00000512813 GNG8Q9UK08 70 aa6.37□□□□□ -1.39
CLCN3-208ENST00000512813 SAMHD1Q9Y3Z3 626 aaKnown RBP6.37□□□□□ -1.39
CLCN3-208ENST00000512813 NUPL2O15504 423 aaKnown RBP6.36□□□□□ -1.39
CLCN3-208ENST00000512813 RRASP10301 218 aa6.36□□□□□ -1.39
CLCN3-208ENST00000512813 RPL27AP46776 148 aaKnown RBP6.36□□□□□ -1.39
CLCN3-208ENST00000512813 CCR9P51686 369 aa6.36□□□□□ -1.39
CLCN3-208ENST00000512813 OR2B8PP59922 312 aa6.36□□□□□ -1.39
CLCN3-208ENST00000512813 TP53I3Q53FA7 332 aa6.36□□□□□ -1.39
CLCN3-208ENST00000512813 TMEM236Q5W0B7 351 aa6.36□□□□□ -1.39
CLCN3-208ENST00000512813 CBR4Q8N4T8 237 aa6.36□□□□□ -1.39
CLCN3-208ENST00000512813 SVOPQ8N4V2 548 aa6.36□□□□□ -1.39
CLCN3-208ENST00000512813 DUSP18Q8NEJ0 188 aa6.36□□□□□ -1.39
CLCN3-208ENST00000512813 OSR1Q8TAX0 266 aaPredicted RBP6.36□□□□□ -1.39
CLCN3-208ENST00000512813 VN1R17PQ8TDU5 208 aa6.36□□□□□ -1.39
CLCN3-208ENST00000512813 DGCR14Q96DF8 476 aaKnown RBP6.36□□□□□ -1.39
CLCN3-208ENST00000512813 ATP6V0BQ99437 205 aa6.36□□□□□ -1.39
CLCN3-208ENST00000512813 S100A13Q99584 98 aa6.36□□□□□ -1.39
CLCN3-208ENST00000512813 TVP23BQ9NYZ1 205 aa6.36□□□□□ -1.39
CLCN3-208ENST00000512813 OR1A1Q9P1Q5 309 aa6.36□□□□□ -1.39
CLCN3-208ENST00000512813 IGHV3OR16-13A0A075B7E8 117 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 IGHV3-74A0A0B4J1X5 117 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 A0A0G2JND7 137 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 LOC102723971A0A1B0GUV8 181 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 OR4C45A6NMZ5 311 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 LINC00473A8K010 186 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 F5H768 121 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 K7EQG2 157 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 CRYZL1O95825 349 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 OR2T7P0C7T2 308 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 OSMP13725 252 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 ZBTB25P24278 435 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 CEACAM6P40199 344 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 VSNL1P62760 191 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 SIGIRRQ6IA17 410 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 CROCCP2Q86T23 111 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 NSMCE2Q96MF7 247 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 UHRF2Q96PU4 802 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 SIKE1Q9BRV8 207 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 THTPAQ9BU02 230 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 VSIRQ9H7M9 311 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 REEP1Q9H902 201 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 SAR1AQ9NR31 198 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 THYN1Q9P016 225 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 RABAC1Q9UI14 185 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 TNFRSF18Q9Y5U5 241 aa6.35□□□□□ -1.39
CLCN3-208ENST00000512813 IGHV3OR16-12A0A075B7B8 117 aa6.34□□□□□ -1.39
CLCN3-208ENST00000512813 B2RBV5 119 aa6.34□□□□□ -1.39
CLCN3-208ENST00000512813 PRKYO43930 277 aa6.34□□□□□ -1.39
CLCN3-208ENST00000512813 BAG2O95816 211 aa6.34□□□□□ -1.39
CLCN3-208ENST00000512813 ZNF688P0C7X2 276 aa6.34□□□□□ -1.39
CLCN3-208ENST00000512813 PSMD7P51665 324 aa6.34□□□□□ -1.39
CLCN3-208ENST00000512813 HNRNPA3P51991 378 aaKnown RBP6.34□□□□□ -1.39
CLCN3-208ENST00000512813 MAGOHP61326 146 aaKnown RBP6.34□□□□□ -1.39
CLCN3-208ENST00000512813 SNRPGP62308 76 aaKnown RBP6.34□□□□□ -1.39
CLCN3-208ENST00000512813 TPBGQ13641 420 aa6.34□□□□□ -1.39
CLCN3-208ENST00000512813 GPR176Q14439 515 aa6.34□□□□□ -1.39
CLCN3-208ENST00000512813 ESRGQ1W209 222 aa6.34□□□□□ -1.39
CLCN3-208ENST00000512813 AADACL4Q5VUY2 407 aa6.34□□□□□ -1.39
CLCN3-208ENST00000512813 NEDD4LQ96PU5 975 aa6.34□□□□□ -1.39
CLCN3-208ENST00000512813 TRAV14DV4A0A0A6YYC5 116 aa6.33□□□□□ -1.4
CLCN3-208ENST00000512813 ST8SIA3O43173 380 aa6.33□□□□□ -1.4
CLCN3-208ENST00000512813 PDCD6O75340 191 aa6.33□□□□□ -1.4
CLCN3-208ENST00000512813 EIF4EP06730 217 aaKnown RBP6.33□□□□□ -1.4
CLCN3-208ENST00000512813 HTR1AP08908 422 aa6.33□□□□□ -1.4
CLCN3-208ENST00000512813 LORP23490 312 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-208ENST00000512813 ZNF93P35789 620 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-208ENST00000512813 ZNF85Q03923 595 aa6.33□□□□□ -1.4
CLCN3-208ENST00000512813 OGFRL1Q5TC84 451 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-208ENST00000512813 OR2T5Q6IEZ7 315 aa6.33□□□□□ -1.4
CLCN3-208ENST00000512813 ZNF880Q6PDB4 577 aa6.33□□□□□ -1.4
CLCN3-208ENST00000512813 MOB1BQ7L9L4 216 aa6.33□□□□□ -1.4
CLCN3-208ENST00000512813 OR10H4Q8NGA5 316 aa6.33□□□□□ -1.4
CLCN3-208ENST00000512813 OR2T29Q8NH02 315 aa6.33□□□□□ -1.4
CLCN3-208ENST00000512813 GIPC3Q8TF64 312 aa6.33□□□□□ -1.4
CLCN3-208ENST00000512813 ST8SIA2Q92186 375 aa6.33□□□□□ -1.4
CLCN3-208ENST00000512813 C5orf30Q96GV9 206 aa6.33□□□□□ -1.4
CLCN3-208ENST00000512813 SDHAF2Q9NX18 166 aa6.33□□□□□ -1.4
CLCN3-208ENST00000512813 H2AFY2Q9P0M6 372 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-208ENST00000512813 FSIP2Q5CZC0 6907 aa6.33□□□□□ -1.4
CLCN3-208ENST00000512813 LYRM9A8MSI8 78 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms