RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 CD300LFQ8TDQ1 290 aa12.36□□□□□ -0.43
DDX41-214ENST00000512334 TINAGL1Q9GZM7 467 aaPredicted RBP12.36□□□□□ -0.43
DDX41-214ENST00000512334 ALX4Q9H161 411 aaPredicted RBP12.36□□□□□ -0.43
DDX41-214ENST00000512334 HRASLSQ9HDD0 168 aa12.36□□□□□ -0.43
DDX41-214ENST00000512334 COA4Q9NYJ1 87 aa12.36□□□□□ -0.43
DDX41-214ENST00000512334 NOTCH3Q9UM47 2321 aa12.36□□□□□ -0.43
DDX41-214ENST00000512334 GABARAPH6UMI1 98 aa12.35□□□□□ -0.43
DDX41-214ENST00000512334 I3L521 148 aa12.35□□□□□ -0.43
DDX41-214ENST00000512334 WIPF1O43516 503 aa12.35□□□□□ -0.43
DDX41-214ENST00000512334 IGHV3-11P01762 117 aa12.35□□□□□ -0.43
DDX41-214ENST00000512334 TAS2R31P59538 309 aa12.35□□□□□ -0.43
DDX41-214ENST00000512334 MRPS10P82664 201 aaKnown RBP12.35□□□□□ -0.43
DDX41-214ENST00000512334 KPRPQ5T749 579 aaPredicted RBP12.35□□□□□ -0.43
DDX41-214ENST00000512334 ASPHD1Q5U4P2 390 aa12.35□□□□□ -0.43
DDX41-214ENST00000512334 DMBX1Q8NFW5 382 aa12.35□□□□□ -0.43
DDX41-214ENST00000512334 TMEM167AQ8TBQ9 72 aa12.35□□□□□ -0.43
DDX41-214ENST00000512334 DPF1Q92782 380 aa12.35□□□□□ -0.43
DDX41-214ENST00000512334 SPIN2AQ99865 258 aa12.35□□□□□ -0.43
DDX41-214ENST00000512334 SPIN2BQ9BPZ2 258 aa12.35□□□□□ -0.43
DDX41-214ENST00000512334 MCRIP2Q9BUT9 160 aaKnown RBP12.35□□□□□ -0.43
DDX41-214ENST00000512334 MEGF8Q7Z7M0 2845 aa12.34□□□□□ -0.43
DDX41-214ENST00000512334 H3BUA1 57 aa12.34□□□□□ -0.43
DDX41-214ENST00000512334 S1PR2O95136 353 aa12.34□□□□□ -0.43
DDX41-214ENST00000512334 PRB2P02812 416 aaPredicted RBP12.34□□□□□ -0.43
DDX41-214ENST00000512334 LGALS1P09382 135 aaKnown RBP12.34□□□□□ -0.43
DDX41-214ENST00000512334 OR8U8P0C7N1 319 aa12.34□□□□□ -0.43
DDX41-214ENST00000512334 PGAM2P15259 253 aa12.34□□□□□ -0.43
DDX41-214ENST00000512334 NQO2P16083 231 aa12.34□□□□□ -0.43
DDX41-214ENST00000512334 TBPP20226 339 aa12.34□□□□□ -0.43
DDX41-214ENST00000512334 TAS2R19P59542 299 aa12.34□□□□□ -0.43
DDX41-214ENST00000512334 ERVK-16P61578 105 aa12.34□□□□□ -0.43
DDX41-214ENST00000512334 RUNX1Q01196 453 aa12.34□□□□□ -0.43
DDX41-214ENST00000512334 ZNF616Q08AN1 781 aa12.34□□□□□ -0.43
DDX41-214ENST00000512334 FOXB2Q5VYV0 432 aa12.34□□□□□ -0.43
DDX41-214ENST00000512334 OR4A47Q6IF82 309 aa12.34□□□□□ -0.43
DDX41-214ENST00000512334 SLC38A6Q8IZM9 456 aa12.34□□□□□ -0.43
DDX41-214ENST00000512334 TMEM229BQ8NBD8 167 aa12.34□□□□□ -0.43
DDX41-214ENST00000512334 DGCR14Q96DF8 476 aaKnown RBP12.34□□□□□ -0.43
DDX41-214ENST00000512334 FYTTD1Q96QD9 318 aaKnown RBP12.34□□□□□ -0.43
DDX41-214ENST00000512334 GPR61Q9BZJ8 451 aa12.34□□□□□ -0.43
DDX41-214ENST00000512334 PLEKHA2Q9HB19 425 aa12.34□□□□□ -0.43
DDX41-214ENST00000512334 RABL2AQ9UBK7 228 aaPredicted RBP12.34□□□□□ -0.43
DDX41-214ENST00000512334 RSL24D1Q9UHA3 163 aaKnown RBP12.34□□□□□ -0.43
DDX41-214ENST00000512334 RABL2BQ9UNT1 228 aa12.34□□□□□ -0.43
DDX41-214ENST00000512334 NOTCH1P46531 2555 aa12.34□□□□□ -0.43
DDX41-214ENST00000512334 TNCP24821 2201 aa12.34□□□□□ -0.43
DDX41-214ENST00000512334 C13orf42A0A1B0GVH6 325 aa12.33□□□□□ -0.44
DDX41-214ENST00000512334 RAB3DO95716 219 aa12.33□□□□□ -0.44
DDX41-214ENST00000512334 OR9G9P0C7N8 305 aa12.33□□□□□ -0.44
DDX41-214ENST00000512334 RPA2P15927 270 aa12.33□□□□□ -0.44
DDX41-214ENST00000512334 F2RP25116 425 aa12.33□□□□□ -0.44
DDX41-214ENST00000512334 MAS1LP35410 378 aa12.33□□□□□ -0.44
DDX41-214ENST00000512334 RPL27AP46776 148 aaKnown RBP12.33□□□□□ -0.44
DDX41-214ENST00000512334 UCP3P55916 312 aa12.33□□□□□ -0.44
DDX41-214ENST00000512334 RPL8P62917 257 aaKnown RBP12.33□□□□□ -0.44
DDX41-214ENST00000512334 DEFA5Q01523 94 aa12.33□□□□□ -0.44
DDX41-214ENST00000512334 SSBP1Q04837 148 aaKnown RBP12.33□□□□□ -0.44
DDX41-214ENST00000512334 PDLIM3Q53GG5 364 aaPredicted RBP12.33□□□□□ -0.44
DDX41-214ENST00000512334 ARRDC1Q8N5I2 433 aa12.33□□□□□ -0.44
DDX41-214ENST00000512334 OR4D10Q8NGI6 311 aa12.33□□□□□ -0.44
DDX41-214ENST00000512334 OR4A5Q8NH83 315 aa12.33□□□□□ -0.44
DDX41-214ENST00000512334 SMIM4Q8WVI0 70 aa12.33□□□□□ -0.44
DDX41-214ENST00000512334 RSRP1Q9BUV0 290 aa12.33□□□□□ -0.44
DDX41-214ENST00000512334 BET1LQ9NYM9 111 aa12.33□□□□□ -0.44
DDX41-214ENST00000512334 COMMD9Q9P000 198 aa12.33□□□□□ -0.44
DDX41-214ENST00000512334 A0A0G2JLM5 398 aa12.32□□□□□ -0.44
DDX41-214ENST00000512334 DPPA5A6NC42 116 aa12.32□□□□□ -0.44
DDX41-214ENST00000512334 FABP12A6NFH5 140 aa12.32□□□□□ -0.44
DDX41-214ENST00000512334 HMX3A6NHT5 357 aa12.32□□□□□ -0.44
DDX41-214ENST00000512334 HOXD3P31249 432 aaPredicted RBP12.32□□□□□ -0.44
DDX41-214ENST00000512334 TNFSF8P32971 234 aa12.32□□□□□ -0.44
DDX41-214ENST00000512334 LPAR6P43657 344 aa12.32□□□□□ -0.44
DDX41-214ENST00000512334 PPP5CP53041 499 aa12.32□□□□□ -0.44
DDX41-214ENST00000512334 FHL3Q13643 280 aa12.32□□□□□ -0.44
DDX41-214ENST00000512334 SCGB2B2Q4G0G5 96 aa12.32□□□□□ -0.44
DDX41-214ENST00000512334 STEAP1BQ6NZ63 245 aa12.32□□□□□ -0.44
DDX41-214ENST00000512334 TBC1D26Q86UD7 250 aa12.32□□□□□ -0.44
DDX41-214ENST00000512334 ADAD2Q8NCV1 583 aaKnown RBP12.32□□□□□ -0.44
DDX41-214ENST00000512334 NXF2Q9GZY0 626 aaKnown RBP12.32□□□□□ -0.44
DDX41-214ENST00000512334 RBM38Q9H0Z9 239 aaKnown RBP12.32□□□□□ -0.44
DDX41-214ENST00000512334 TMEM140Q9NV12 185 aa12.32□□□□□ -0.44
DDX41-214ENST00000512334 IGHV4OR15-8A0A075B7B6 117 aa12.31□□□□□ -0.44
DDX41-214ENST00000512334 A0A087WW49 117 aa12.31□□□□□ -0.44
DDX41-214ENST00000512334 LINC01619G3V211 115 aa12.31□□□□□ -0.44
DDX41-214ENST00000512334 CTDSPLO15194 276 aa12.31□□□□□ -0.44
DDX41-214ENST00000512334 CD74P04233 296 aa12.31□□□□□ -0.44
DDX41-214ENST00000512334 HLA-GP17693 338 aa12.31□□□□□ -0.44
DDX41-214ENST00000512334 POU2AF1Q16633 256 aa12.31□□□□□ -0.44
DDX41-214ENST00000512334 SLC2A9Q9NRM0 540 aa12.31□□□□□ -0.44
DDX41-214ENST00000512334 TRAV3A0A0B4J244 114 aa12.3□□□□□ -0.44
DDX41-214ENST00000512334 MARCH11A6NNE9 402 aa12.3□□□□□ -0.44
DDX41-214ENST00000512334 TEX22C9J3V5 150 aa12.3□□□□□ -0.44
DDX41-214ENST00000512334 UPK2O00526 184 aa12.3□□□□□ -0.44
DDX41-214ENST00000512334 KRASP01116 189 aa12.3□□□□□ -0.44
DDX41-214ENST00000512334 PRH1P02810 166 aa12.3□□□□□ -0.44
DDX41-214ENST00000512334 HSPB1P04792 205 aaKnown RBP12.3□□□□□ -0.44
DDX41-214ENST00000512334 IL6RP08887 468 aaPredicted RBP12.3□□□□□ -0.44
DDX41-214ENST00000512334 MYOD1P15172 320 aa12.3□□□□□ -0.44
DDX41-214ENST00000512334 PI3P19957 117 aa12.3□□□□□ -0.44
DDX41-214ENST00000512334 G6PCP35575 357 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms