RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 NDUFA13Q9P0J0 144 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 ABRACLQ9P1F3 81 aa8.6□□□□□ -1.03
RNF4-216ENST00000511859 A6NHS1 94 aa8.59□□□□□ -1.03
RNF4-216ENST00000511859 PDCD6O75340 191 aa8.59□□□□□ -1.03
RNF4-216ENST00000511859 RBMXL2O75526 392 aaKnown RBP8.59□□□□□ -1.03
RNF4-216ENST00000511859 TUSC2O75896 110 aa8.59□□□□□ -1.03
RNF4-216ENST00000511859 EIF4EP06730 217 aaKnown RBP8.59□□□□□ -1.03
RNF4-216ENST00000511859 RAB6AP20340 208 aa8.59□□□□□ -1.03
RNF4-216ENST00000511859 TMEM50BP56557 158 aa8.59□□□□□ -1.03
RNF4-216ENST00000511859 PDPNQ86YL7 162 aa8.59□□□□□ -1.03
RNF4-216ENST00000511859 TMEM61Q8N0U2 210 aa8.59□□□□□ -1.03
RNF4-216ENST00000511859 OR56B1Q8NGI3 324 aa8.59□□□□□ -1.03
RNF4-216ENST00000511859 ARHGAP5-AS1Q96IT6 56 aa8.59□□□□□ -1.03
RNF4-216ENST00000511859 ABHD14BQ96IU4 210 aa8.59□□□□□ -1.03
RNF4-216ENST00000511859 AKIP1Q9NQ31 210 aa8.59□□□□□ -1.03
RNF4-216ENST00000511859 CCDC59Q9P031 241 aaKnown RBP8.59□□□□□ -1.03
RNF4-216ENST00000511859 ZNF230Q9UIE0 474 aaPredicted RBP8.59□□□□□ -1.03
RNF4-216ENST00000511859 FBXL7Q9UJT9 491 aa8.59□□□□□ -1.03
RNF4-216ENST00000511859 SPATA2Q9UM82 520 aa8.59□□□□□ -1.03
RNF4-216ENST00000511859 ETV7Q9Y603 341 aa8.59□□□□□ -1.03
RNF4-216ENST00000511859 METTL21EPA6NDL7 271 aa8.58□□□□□ -1.04
RNF4-216ENST00000511859 FAM25AB3EWG3 89 aa8.58□□□□□ -1.04
RNF4-216ENST00000511859 FAM25CB3EWG5 89 aa8.58□□□□□ -1.04
RNF4-216ENST00000511859 FAM25GB3EWG6 89 aa8.58□□□□□ -1.04
RNF4-216ENST00000511859 ZNF701M0R085 212 aaPredicted RBP8.58□□□□□ -1.04
RNF4-216ENST00000511859 CTDSP2O14595 271 aa8.58□□□□□ -1.04
RNF4-216ENST00000511859 RGS5O15539 181 aa8.58□□□□□ -1.04
RNF4-216ENST00000511859 GGCTO75223 188 aaKnown RBP8.58□□□□□ -1.04
RNF4-216ENST00000511859 RANBP1P43487 201 aa8.58□□□□□ -1.04
RNF4-216ENST00000511859 PJVKQ0ZLH3 352 aa8.58□□□□□ -1.04
RNF4-216ENST00000511859 EXOSC2Q13868 293 aaKnown RBP8.58□□□□□ -1.04
RNF4-216ENST00000511859 RBMS2Q15434 407 aaKnown RBP8.58□□□□□ -1.04
RNF4-216ENST00000511859 HMGN3Q15651 99 aa8.58□□□□□ -1.04
RNF4-216ENST00000511859 UBE2NLQ5JXB2 153 aa8.58□□□□□ -1.04
RNF4-216ENST00000511859 MZT2AQ6P582 158 aa8.58□□□□□ -1.04
RNF4-216ENST00000511859 GPHB5Q86YW7 130 aa8.58□□□□□ -1.04
RNF4-216ENST00000511859 FAM89BQ8N5H3 189 aa8.58□□□□□ -1.04
RNF4-216ENST00000511859 GVQW1Q8N7I0 195 aa8.58□□□□□ -1.04
RNF4-216ENST00000511859 ADAD2Q8NCV1 583 aaKnown RBP8.58□□□□□ -1.04
RNF4-216ENST00000511859 OR10R2Q8NGX6 335 aa8.58□□□□□ -1.04
RNF4-216ENST00000511859 C11orf45Q8TAV5 145 aa8.58□□□□□ -1.04
RNF4-216ENST00000511859 IL1F10Q8WWZ1 152 aa8.58□□□□□ -1.04
RNF4-216ENST00000511859 EDARADDQ8WWZ3 215 aa8.58□□□□□ -1.04
RNF4-216ENST00000511859 PECRQ9BY49 303 aa8.58□□□□□ -1.04
RNF4-216ENST00000511859 C6orf62Q9GZU0 229 aaPredicted RBP8.58□□□□□ -1.04
RNF4-216ENST00000511859 PLEKHJ1Q9NW61 149 aa8.58□□□□□ -1.04
RNF4-216ENST00000511859 ELF5Q9UKW6 265 aaPredicted RBP8.58□□□□□ -1.04
RNF4-216ENST00000511859 TRBV9A0A0B4J1U6 114 aa8.57□□□□□ -1.04
RNF4-216ENST00000511859 TRAV25A0A0B4J276 109 aa8.57□□□□□ -1.04
RNF4-216ENST00000511859 PRSS29PA6NIE9 313 aa8.57□□□□□ -1.04
RNF4-216ENST00000511859 RAB27BO00194 218 aa8.57□□□□□ -1.04
RNF4-216ENST00000511859 SCAF4O95104 1147 aaKnown RBP8.57□□□□□ -1.04
RNF4-216ENST00000511859 APOA2P02652 100 aa8.57□□□□□ -1.04
RNF4-216ENST00000511859 CRYGBP07316 175 aa8.57□□□□□ -1.04
RNF4-216ENST00000511859 OR9G9P0C7N8 305 aa8.57□□□□□ -1.04
RNF4-216ENST00000511859 PTHLHP12272 177 aa8.57□□□□□ -1.04
RNF4-216ENST00000511859 GNB3P16520 340 aa8.57□□□□□ -1.04
RNF4-216ENST00000511859 ELK1P19419 428 aa8.57□□□□□ -1.04
RNF4-216ENST00000511859 EDN2P20800 178 aa8.57□□□□□ -1.04
RNF4-216ENST00000511859 RHOGP84095 191 aa8.57□□□□□ -1.04
RNF4-216ENST00000511859 PLAC9Q5JTB6 97 aa8.57□□□□□ -1.04
RNF4-216ENST00000511859 ZNF383Q8NA42 475 aa8.57□□□□□ -1.04
RNF4-216ENST00000511859 DRAXINQ8NBI3 349 aaPredicted RBP8.57□□□□□ -1.04
RNF4-216ENST00000511859 MCFD2Q8NI22 146 aa8.57□□□□□ -1.04
RNF4-216ENST00000511859 ACOT12Q8WYK0 555 aa8.57□□□□□ -1.04
RNF4-216ENST00000511859 AP3S1Q92572 193 aa8.57□□□□□ -1.04
RNF4-216ENST00000511859 PTX4Q96A99 478 aa8.57□□□□□ -1.04
RNF4-216ENST00000511859 RAB3CQ96E17 227 aa8.57□□□□□ -1.04
RNF4-216ENST00000511859 PHB2Q99623 299 aa8.57□□□□□ -1.04
RNF4-216ENST00000511859 HDHD3Q9BSH5 251 aaPredicted RBP8.57□□□□□ -1.04
RNF4-216ENST00000511859 SLIRPQ9GZT3 109 aaKnown RBP8.57□□□□□ -1.04
RNF4-216ENST00000511859 TRAV18A0A075B6X5 111 aa8.56□□□□□ -1.04
RNF4-216ENST00000511859 FOXI3A8MTJ6 420 aaPredicted RBP8.56□□□□□ -1.04
RNF4-216ENST00000511859 XRCC3O43542 346 aa8.56□□□□□ -1.04
RNF4-216ENST00000511859 PROP1O75360 226 aa8.56□□□□□ -1.04
RNF4-216ENST00000511859 OR2C1O95371 312 aa8.56□□□□□ -1.04
RNF4-216ENST00000511859 IGLV2-23P01705 113 aa8.56□□□□□ -1.04
RNF4-216ENST00000511859 SCAND1P57086 179 aa8.56□□□□□ -1.04
RNF4-216ENST00000511859 NANOS2P60321 138 aaKnown RBP8.56□□□□□ -1.04
RNF4-216ENST00000511859 CDNFQ49AH0 187 aa8.56□□□□□ -1.04
RNF4-216ENST00000511859 SLC38A6Q8IZM9 456 aa8.56□□□□□ -1.04
RNF4-216ENST00000511859 NECAP1Q8NC96 275 aa8.56□□□□□ -1.04
RNF4-216ENST00000511859 OR1L6Q8NGR2 347 aa8.56□□□□□ -1.04
RNF4-216ENST00000511859 SETD6Q8TBK2 473 aa8.56□□□□□ -1.04
RNF4-216ENST00000511859 MIXL1Q9H2W2 232 aa8.56□□□□□ -1.04
RNF4-216ENST00000511859 CHMP1AQ9HD42 196 aaPredicted RBP8.56□□□□□ -1.04
RNF4-216ENST00000511859 BATF3Q9NR55 127 aa8.56□□□□□ -1.04
RNF4-216ENST00000511859 MLXQ9UH92 298 aa8.56□□□□□ -1.04
RNF4-216ENST00000511859 AK3Q9UIJ7 227 aa8.56□□□□□ -1.04
RNF4-216ENST00000511859 APLNQ9ULZ1 77 aa8.56□□□□□ -1.04
RNF4-216ENST00000511859 KCNK7Q9Y2U2 307 aa8.56□□□□□ -1.04
RNF4-216ENST00000511859 DMRT1Q9Y5R6 373 aa8.56□□□□□ -1.04
RNF4-216ENST00000511859 TMEM235A6NFC5 223 aa8.55□□□□□ -1.04
RNF4-216ENST00000511859 PPP5D1E7EU14 171 aa8.55□□□□□ -1.04
RNF4-216ENST00000511859 TMEM127O75204 238 aa8.55□□□□□ -1.04
RNF4-216ENST00000511859 APELAP0DMC3 54 aa8.55□□□□□ -1.04
RNF4-216ENST00000511859 HIST1H1DP16402 221 aaKnown RBP8.55□□□□□ -1.04
RNF4-216ENST00000511859 CNPY1Q3B7I2 92 aa8.55□□□□□ -1.04
RNF4-216ENST00000511859 FAM106AQ4KMX7 169 aa8.55□□□□□ -1.04
RNF4-216ENST00000511859 OR4A47Q6IF82 309 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms