RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 IL3P08700 152 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 GKN3PP0CG01 181 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 MT1HL1P0DM35 61 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 CRISP3P54108 245 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 ACTBP60709 375 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 UBE2MP61081 183 aaKnown RBP2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 PABPC1L2AQ5JQF8 200 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 CDKL4Q5MAI5 379 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 MINOS1Q5TGZ0 78 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 OR5AS1Q8N127 324 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 ZNF561Q8N587 486 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 OR8G5Q8NG78 346 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 OR4D6Q8NGJ1 314 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 OR13D1Q8NGV5 346 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 OR5B3Q8NH48 314 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 OR5K1Q8NHB7 308 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 CMBLQ96DG6 245 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 CHMP6Q96FZ7 201 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 OR5B12Q96R08 314 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 CCL13Q99616 98 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 TMEM70Q9BUB7 260 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 PARP12Q9H0J9 701 aaKnown RBP2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 ZNF229Q9UJW7 825 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 RAB26Q9ULW5 256 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 HILPDAQ9Y5L2 63 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 MINOS1-NBL1R4GNA1 71 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 V9GYY9 64 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 SYNE2Q8WXH0 6885 aaKnown RBP2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 MACF1Q9UPN3 7388 aaKnown RBP2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 IGHV3OR15-7A0A075B7D8 119 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 NBDYA0A0U1RRE5 68 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 A0A1B0GTI1 187 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 A0A1B0GW15 77 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 A6NDN8 102 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 CLDN24A6NM45 220 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 FTCDNL1E5RQL4 147 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 IGHG2P01859 326 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 CD7P09564 240 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 OR5H8P0DN80 308 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 IGHV3-43DP0DP04 118 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 MUC1P15941 1255 aaPredicted RBP2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 CD24P25063 80 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 PSMB8P28062 276 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 SERPINB5P36952 375 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 CD200P41217 278 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 NMUP48645 174 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 CSNK1A1P48729 337 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 CCR6P51684 374 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 ATP6V0D1P61421 351 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 ACTA2P62736 377 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 ACTG2P63267 376 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 ACTC1P68032 377 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 ACTA1P68133 377 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 DYNC1I2Q13409 638 aaKnown RBP2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 DGCR6Q14129 220 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 PSG5Q15238 335 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 MAPRE2Q15555 327 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 ATP6V1FQ16864 119 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 RFX4Q33E94 735 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 TPTE2P1Q5T6R2 138 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 TEX36Q5VZQ5 186 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 WDR82Q6UXN9 313 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 VKORC1L1Q8N0U8 176 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 CLDN22Q8N7P3 220 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 DUSP18Q8NEJ0 188 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 OR9Q1Q8NGQ5 310 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 OR2K2Q8NGT1 345 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 OR10R2Q8NGX6 335 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 MYOZ3Q8TDC0 251 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 GTF2H4Q92759 462 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 CDKL2Q92772 493 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 C12orf43Q96C57 262 aaKnown RBP2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 FLYWCH2Q96CP2 140 aaKnown RBP2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 RCN3Q96D15 328 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 CENPNQ96H22 339 aaPredicted RBP2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 ZNF488Q96MN9 340 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 CCDC115Q96NT0 180 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 PRSS27Q9BQR3 290 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 TSGA10Q9BZW7 698 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 NAA50Q9GZZ1 169 aaKnown RBP2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 TMEM38AQ9H6F2 299 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 OR2S2Q9NQN1 319 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 ZNF355PQ9NSJ1 428 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 TMEM38BQ9NVV0 291 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 NKIRAS1Q9NYS0 192 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 VAPAQ9P0L0 249 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 OPTCQ9UBM4 332 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 ENPP5Q9UJA9 477 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 KLK12Q9UKR0 248 aa2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 V9GYY5 206 aaPredicted RBP2.16□□□□□ -2.06
TOPBP1-208ENST00000511439 SSPOA2VEC9 5147 aa2.15□□□□□ -2.06
TOPBP1-208ENST00000511439 ZNF726A6NNF4 738 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 SMKR1H3BMG3 65 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 FGF16O43320 207 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 AHSA1O95433 338 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 C6orf47O95873 294 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 MMP7P09237 267 aaPredicted RBP2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 OCMP0CE72 109 aaPredicted RBP2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 ZNF32P17041 273 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms