RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 HNRNPA3P51991 378 aaKnown RBP4.13□□□□□ -1.75
USP53-206ENST00000510737 CDK5R1Q15078 307 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 WHAMMP3Q1A5X7 153 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 IFI44LQ53G44 452 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 ZNF57Q68EA5 555 aaPredicted RBP4.13□□□□□ -1.75
USP53-206ENST00000510737 ERICH5Q6P6B1 374 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 ZNF562Q6V9R5 426 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 ZNF439Q8NDP4 499 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 OR52M1Q8NGK5 317 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 OR8D4Q8NGM9 314 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 OR4A5Q8NH83 315 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 PLPPR1Q8TBJ4 325 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 NDUFAF3Q9BU61 184 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 COMMD4Q9H0A8 199 aa4.13□□□□□ -1.75
USP53-206ENST00000510737 RIMS4Q9H426 269 aaPredicted RBP4.13□□□□□ -1.75
USP53-206ENST00000510737 H3BUA1 57 aa4.12□□□□□ -1.75
USP53-206ENST00000510737 FXYD1O00168 92 aa4.12□□□□□ -1.75
USP53-206ENST00000510737 SDCBPO00560 298 aaPredicted RBP4.12□□□□□ -1.75
USP53-206ENST00000510737 ANGPT2O15123 496 aa4.12□□□□□ -1.75
USP53-206ENST00000510737 LANCL1O43813 399 aa4.12□□□□□ -1.75
USP53-206ENST00000510737 HLA-AP01891 365 aaKnown RBP4.12□□□□□ -1.75
USP53-206ENST00000510737 SCTP09683 121 aa4.12□□□□□ -1.75
USP53-206ENST00000510737 ALOX5APP20292 161 aa4.12□□□□□ -1.75
USP53-206ENST00000510737 OR3A3P47888 321 aa4.12□□□□□ -1.75
USP53-206ENST00000510737 ADARB1P78563 741 aaKnown RBP4.12□□□□□ -1.75
USP53-206ENST00000510737 PDZK1IP1Q13113 114 aa4.12□□□□□ -1.75
USP53-206ENST00000510737 C12orf74Q32Q52 190 aa4.12□□□□□ -1.75
USP53-206ENST00000510737 CYP4Z1Q86W10 505 aa4.12□□□□□ -1.75
USP53-206ENST00000510737 UBE2DNLQ8IWF7 75 aa4.12□□□□□ -1.75
USP53-206ENST00000510737 C6orf223Q8N319 242 aa4.12□□□□□ -1.75
USP53-206ENST00000510737 Q8NAQ8 132 aa4.12□□□□□ -1.75
USP53-206ENST00000510737 UXS1Q8NBZ7 420 aa4.12□□□□□ -1.75
USP53-206ENST00000510737 CHST4Q8NCG5 386 aa4.12□□□□□ -1.75
USP53-206ENST00000510737 OR5B3Q8NH48 314 aa4.12□□□□□ -1.75
USP53-206ENST00000510737 GALNT14Q96FL9 552 aa4.12□□□□□ -1.75
USP53-206ENST00000510737 C7orf34Q96L11 122 aa4.12□□□□□ -1.75
USP53-206ENST00000510737 ROPN1BQ9BZX4 212 aaPredicted RBP4.12□□□□□ -1.75
USP53-206ENST00000510737 ROPN1Q9HAT0 212 aaPredicted RBP4.12□□□□□ -1.75
USP53-206ENST00000510737 IL20Q9NYY1 176 aa4.12□□□□□ -1.75
USP53-206ENST00000510737 NUFIP1Q9UHK0 495 aaKnown RBP4.12□□□□□ -1.75
USP53-206ENST00000510737 CDH10Q9Y6N8 788 aa4.12□□□□□ -1.75
USP53-206ENST00000510737 IGKV1-9A0A0C4DH69 117 aa4.11□□□□□ -1.75
USP53-206ENST00000510737 CYB5AP00167 134 aa4.11□□□□□ -1.75
USP53-206ENST00000510737 PRB4P10163 310 aaPredicted RBP4.11□□□□□ -1.75
USP53-206ENST00000510737 NCK1P16333 377 aa4.11□□□□□ -1.75
USP53-206ENST00000510737 GZMHP20718 246 aa4.11□□□□□ -1.75
USP53-206ENST00000510737 FUSP35637 526 aaKnown RBP eCLIP4.11□□□□□ -1.75
USP53-206ENST00000510737 RBP2P50120 134 aa4.11□□□□□ -1.75
USP53-206ENST00000510737 TSPAN31Q12999 210 aa4.11□□□□□ -1.75
USP53-206ENST00000510737 DEGS2Q6QHC5 323 aa4.11□□□□□ -1.75
USP53-206ENST00000510737 ELMOD2Q8IZ81 293 aa4.11□□□□□ -1.75
USP53-206ENST00000510737 OR8J3Q8NGG0 315 aa4.11□□□□□ -1.75
USP53-206ENST00000510737 OR1L6Q8NGR2 347 aa4.11□□□□□ -1.75
USP53-206ENST00000510737 GNPDA2Q8TDQ7 276 aa4.11□□□□□ -1.75
USP53-206ENST00000510737 ARL11Q969Q4 196 aa4.11□□□□□ -1.75
USP53-206ENST00000510737 BORCS8Q96FH0 119 aa4.11□□□□□ -1.75
USP53-206ENST00000510737 USMG5Q96IX5 58 aa4.11□□□□□ -1.75
USP53-206ENST00000510737 SH3GL1Q99961 368 aa4.11□□□□□ -1.75
USP53-206ENST00000510737 MRPL20Q9BYC9 149 aaKnown RBP4.11□□□□□ -1.75
USP53-206ENST00000510737 SPATA2Q9UM82 520 aa4.11□□□□□ -1.75
USP53-206ENST00000510737 PKHD1L1Q86WI1 4243 aa4.1□□□□□ -1.75
USP53-206ENST00000510737 TMEM213A2RRL7 107 aa4.1□□□□□ -1.75
USP53-206ENST00000510737 DHRS7CA6NNS2 312 aa4.1□□□□□ -1.75
USP53-206ENST00000510737 PPP5D1E7EU14 171 aa4.1□□□□□ -1.75
USP53-206ENST00000510737 H0YJX3 145 aa4.1□□□□□ -1.75
USP53-206ENST00000510737 MAGEB4O15481 346 aaPredicted RBP4.1□□□□□ -1.75
USP53-206ENST00000510737 CA2P00918 260 aa4.1□□□□□ -1.75
USP53-206ENST00000510737 NUDT2P50583 147 aa4.1□□□□□ -1.75
USP53-206ENST00000510737 ATP1B3P54709 279 aa4.1□□□□□ -1.75
USP53-206ENST00000510737 MTCP1P56278 107 aa4.1□□□□□ -1.75
USP53-206ENST00000510737 PAX5Q02548 391 aa4.1□□□□□ -1.75
USP53-206ENST00000510737 FXYD3Q14802 87 aa4.1□□□□□ -1.75
USP53-206ENST00000510737 SLC22A6Q4U2R8 563 aa4.1□□□□□ -1.75
USP53-206ENST00000510737 BTNL8Q6UX41 500 aa4.1□□□□□ -1.75
USP53-206ENST00000510737 APRG1Q8IVJ8 170 aa4.1□□□□□ -1.75
USP53-206ENST00000510737 SLC38A6Q8IZM9 456 aa4.1□□□□□ -1.75
USP53-206ENST00000510737 KCNG3Q8TAE7 436 aa4.1□□□□□ -1.75
USP53-206ENST00000510737 GTSF1Q8WW33 167 aa4.1□□□□□ -1.75
USP53-206ENST00000510737 TSSK6Q9BXA6 273 aa4.1□□□□□ -1.75
USP53-206ENST00000510737 OR51V1Q9H2C8 321 aa4.1□□□□□ -1.75
USP53-206ENST00000510737 ZNF230Q9UIE0 474 aaPredicted RBP4.1□□□□□ -1.75
USP53-206ENST00000510737 RPL36Q9Y3U8 105 aaKnown RBP4.1□□□□□ -1.75
USP53-206ENST00000510737 FAM32AQ9Y421 112 aaKnown RBP4.1□□□□□ -1.75
USP53-206ENST00000510737 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.09□□□□□ -1.75
USP53-206ENST00000510737 TRAV25A0A0B4J276 109 aa4.09□□□□□ -1.75
USP53-206ENST00000510737 NBDYA0A0U1RRE5 68 aa4.09□□□□□ -1.75
USP53-206ENST00000510737 E2F6O75461 281 aa4.09□□□□□ -1.75
USP53-206ENST00000510737 C8orf88P0DMB2 117 aa4.09□□□□□ -1.75
USP53-206ENST00000510737 CCL1P22362 96 aa4.09□□□□□ -1.75
USP53-206ENST00000510737 IFFO1Q0D2I5 559 aa4.09□□□□□ -1.75
USP53-206ENST00000510737 PLGLAQ15195 96 aa4.09□□□□□ -1.75
USP53-206ENST00000510737 PSG5Q15238 335 aa4.09□□□□□ -1.75
USP53-206ENST00000510737 Q3ZCU0 254 aa4.09□□□□□ -1.75
USP53-206ENST00000510737 PAN3Q58A45 887 aaKnown RBP4.09□□□□□ -1.75
USP53-206ENST00000510737 FAM131AQ6UXB0 335 aa4.09□□□□□ -1.75
USP53-206ENST00000510737 RBPMS2Q6ZRY4 209 aaKnown RBP4.09□□□□□ -1.75
USP53-206ENST00000510737 GPHB5Q86YW7 130 aa4.09□□□□□ -1.75
USP53-206ENST00000510737 ZNF679Q8IYX0 411 aa4.09□□□□□ -1.75
USP53-206ENST00000510737 MNS1Q8NEH6 495 aa4.09□□□□□ -1.75
USP53-206ENST00000510737 OR13C5Q8NGS8 318 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms