RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 SSX7Q7RTT5 188 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 GTSCR1Q86UQ5 136 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 BEND2Q8NDZ0 799 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 C17orf50Q8WW18 174 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 WDR61Q9GZS3 305 aaKnown RBP4.24□□□□□ -1.73
PHF3-210ENST00000509876 CLEC5AQ9NY25 188 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 IGKV1-12A0A0C4DH73 117 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 IGKV1D-12P01611 117 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 S100A9P06702 114 aaKnown RBP4.24□□□□□ -1.73
PHF3-210ENST00000509876 ZP3P21754 424 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 CD1BP29016 333 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 S100A2P29034 98 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 NTF4P34130 210 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 Q6ZR03 302 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 BIVMQ86UB2 503 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 FAM89BQ8N5H3 189 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 ZNF524Q96C55 264 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 GPR146Q96CH1 333 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 RND2P52198 227 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 PSG9Q00887 426 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 GAMTQ14353 236 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 HABP2Q14520 560 aaPredicted RBP4.24□□□□□ -1.73
PHF3-210ENST00000509876 TMEM249Q2WGJ8 235 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 BAP18Q8IXM2 172 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 IFT22Q9H7X7 185 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 NAGKQ9UJ70 344 aa4.24□□□□□ -1.73
PHF3-210ENST00000509876 PCNX2A6NKB5 2137 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 NUP210LQ5VU65 1888 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 MPDU1O75352 247 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 SAA1P0DJI8 122 aaPredicted RBP4.23□□□□□ -1.73
PHF3-210ENST00000509876 B2MP61769 119 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 TNFRSF9Q07011 255 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 Q6P435 159 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 TEX38Q6PEX7 206 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 DTX2Q86UW9 622 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 TMEM219Q86XT9 240 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 C18orf12Q96KH6 178 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 RBM38Q9H0Z9 239 aaKnown RBP4.23□□□□□ -1.73
PHF3-210ENST00000509876 NCOR1P1Q9H4R4 102 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 ACACAQ13085 2346 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 IGHV2-70P01814 119 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 ZNF137PP52743 207 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 CMC4P56277 68 aaPredicted RBP4.23□□□□□ -1.73
PHF3-210ENST00000509876 NUTF2P61970 127 aaKnown RBP4.23□□□□□ -1.73
PHF3-210ENST00000509876 NIPSNAP3BQ9BS92 247 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 SLC2A8Q9NY64 477 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 C21orf62Q9NYP8 219 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 ZNF257Q9Y2Q1 563 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 IGHV4-30-2A0A087WSY4 118 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 RBFOX2O43251 390 aaKnown RBP eCLIP4.23□□□□□ -1.73
PHF3-210ENST00000509876 SIAH2O43255 324 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 PJVKQ0ZLH3 352 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 ZNF660Q6AZW8 331 aaPredicted RBP4.23□□□□□ -1.73
PHF3-210ENST00000509876 DHRS11Q6UWP2 260 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 SIGLECL1Q8N7X8 197 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 ZNF738Q8NE65 137 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 OR4P4Q8NGL7 312 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 SPTA1P02549 2419 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 C19orf84I3L1E1 186 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 UPK2O00526 184 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 CD24P25063 80 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 TSPOP30536 169 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 EWSR1Q01844 656 aaKnown RBP eCLIP4.23□□□□□ -1.73
PHF3-210ENST00000509876 RPL7L1Q6DKI1 246 aaKnown RBP4.23□□□□□ -1.73
PHF3-210ENST00000509876 CLEC19AQ6UXS0 136 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 RCC2Q9P258 522 aaKnown RBP4.23□□□□□ -1.73
PHF3-210ENST00000509876 ELF5Q9UKW6 265 aaPredicted RBP4.23□□□□□ -1.73
PHF3-210ENST00000509876 LRP4O75096 1905 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 SVILO95425 2214 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 MSGN1A6NI15 193 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 C17orf98A8MV24 154 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 PITX3O75364 302 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 OR9G9P0C7N8 305 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 ADIRFQ15847 76 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 RRN3P1Q2M238 152 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 BSCL2Q96G97 398 aaPredicted RBP4.23□□□□□ -1.73
PHF3-210ENST00000509876 MARVELD1Q9BSK0 173 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 TMEM56-RWDD3S4R434 201 aa4.23□□□□□ -1.73
PHF3-210ENST00000509876 TRBV6-6A0A0A6YYG2 114 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 C5orf63A6NC05 138 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 PSPNO60542 156 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 SPNP16150 400 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 TMEM187Q14656 261 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 TMEM41BQ5BJD5 291 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 SOHLH1Q5JUK2 328 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 FAM78BQ5VT40 261 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 NRGNQ92686 78 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 EAF1Q96JC9 268 aaPredicted RBP4.22□□□□□ -1.73
PHF3-210ENST00000509876 TOLLIPQ9H0E2 274 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 PARP12Q9H0J9 701 aaKnown RBP4.22□□□□□ -1.73
PHF3-210ENST00000509876 KAAG1Q9UBP8 84 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 MLXQ9UH92 298 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 FAM90A9PA6NNJ1 464 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 BOLA2-SMG1P6H3BVE0 249 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 CD37P11049 281 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 PAX6P26367 422 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 PRSS57Q6UWY2 283 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 TMED6Q8WW62 240 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 SRSF12Q8WXF0 261 aaKnown RBP4.22□□□□□ -1.73
PHF3-210ENST00000509876 FRZBQ92765 325 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms