RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 KCNK7Q9Y2U2 307 aa11.89□□□□□ -0.51
CXCL1-202ENST00000509101 RYR1P21817 5038 aa11.88□□□□□ -0.51
CXCL1-202ENST00000509101 NPIPB5A8MRT5 1133 aa11.88□□□□□ -0.51
CXCL1-202ENST00000509101 DIRAS3O95661 229 aa11.88□□□□□ -0.51
CXCL1-202ENST00000509101 RPL27AP46776 148 aaKnown RBP11.88□□□□□ -0.51
CXCL1-202ENST00000509101 LGALS9CQ6DKI2 356 aa11.88□□□□□ -0.51
CXCL1-202ENST00000509101 OR4A47Q6IF82 309 aa11.88□□□□□ -0.51
CXCL1-202ENST00000509101 TMEM91Q6ZNR0 172 aa11.88□□□□□ -0.51
CXCL1-202ENST00000509101 RBPMS2Q6ZRY4 209 aaKnown RBP11.88□□□□□ -0.51
CXCL1-202ENST00000509101 KCTD9Q7L273 389 aa11.88□□□□□ -0.51
CXCL1-202ENST00000509101 VKORC1L1Q8N0U8 176 aa11.88□□□□□ -0.51
CXCL1-202ENST00000509101 PHLDA1Q8WV24 401 aaPredicted RBP11.88□□□□□ -0.51
CXCL1-202ENST00000509101 UFD1Q92890 307 aa11.88□□□□□ -0.51
CXCL1-202ENST00000509101 EEF1AKMT3Q96AZ1 226 aa11.88□□□□□ -0.51
CXCL1-202ENST00000509101 FANCD2OSQ96PS1 177 aa11.88□□□□□ -0.51
CXCL1-202ENST00000509101 FYTTD1Q96QD9 318 aaKnown RBP11.88□□□□□ -0.51
CXCL1-202ENST00000509101 J3QRK9 145 aa11.87□□□□□ -0.51
CXCL1-202ENST00000509101 IL6RP08887 468 aaPredicted RBP11.87□□□□□ -0.51
CXCL1-202ENST00000509101 AREGP15514 252 aa11.87□□□□□ -0.51
CXCL1-202ENST00000509101 ATF4P18848 351 aaPredicted RBP11.87□□□□□ -0.51
CXCL1-202ENST00000509101 MLLT11Q13015 90 aaPredicted RBP11.87□□□□□ -0.51
CXCL1-202ENST00000509101 UNQ9165/PRO28630Q6UXU0 137 aa11.87□□□□□ -0.51
CXCL1-202ENST00000509101 H1FOOQ8IZA3 346 aaPredicted RBP11.87□□□□□ -0.51
CXCL1-202ENST00000509101 FAM3DQ96BQ1 224 aa11.87□□□□□ -0.51
CXCL1-202ENST00000509101 RAB3CQ96E17 227 aa11.87□□□□□ -0.51
CXCL1-202ENST00000509101 MGLLQ99685 303 aa11.87□□□□□ -0.51
CXCL1-202ENST00000509101 ACOT13Q9NPJ3 140 aa11.87□□□□□ -0.51
CXCL1-202ENST00000509101 A0A075B6Q4 140 aa11.86□□□□□ -0.51
CXCL1-202ENST00000509101 TRAV25A0A0B4J276 109 aa11.86□□□□□ -0.51
CXCL1-202ENST00000509101 TMEM272A0A1B0GTI8 110 aa11.86□□□□□ -0.51
CXCL1-202ENST00000509101 A0A1B0GW64 132 aa11.86□□□□□ -0.51
CXCL1-202ENST00000509101 MFSD2BA6NFX1 497 aa11.86□□□□□ -0.51
CXCL1-202ENST00000509101 E7EUB6 86 aa11.86□□□□□ -0.51
CXCL1-202ENST00000509101 TBCEQ15813 527 aaPredicted RBP11.86□□□□□ -0.51
CXCL1-202ENST00000509101 C2orf76Q3KRA6 126 aa11.86□□□□□ -0.51
CXCL1-202ENST00000509101 ZNF585BQ52M93 769 aa11.86□□□□□ -0.51
CXCL1-202ENST00000509101 OR2C3Q8N628 320 aa11.86□□□□□ -0.51
CXCL1-202ENST00000509101 TMEM217Q8N7C4 229 aa11.86□□□□□ -0.51
CXCL1-202ENST00000509101 RNF183Q96D59 192 aa11.86□□□□□ -0.51
CXCL1-202ENST00000509101 OR51E2Q9H255 320 aa11.86□□□□□ -0.51
CXCL1-202ENST00000509101 SLC2A9Q9NRM0 540 aa11.86□□□□□ -0.51
CXCL1-202ENST00000509101 BLOC1S6Q9UL45 172 aa11.86□□□□□ -0.51
CXCL1-202ENST00000509101 MRPS7Q9Y2R9 242 aaKnown RBP11.86□□□□□ -0.51
CXCL1-202ENST00000509101 IGHV3-35A0A0C4DH35 117 aa11.85□□□□□ -0.51
CXCL1-202ENST00000509101 UBE2CO00762 179 aa11.85□□□□□ -0.51
CXCL1-202ENST00000509101 KBTBD11O94819 623 aa11.85□□□□□ -0.51
CXCL1-202ENST00000509101 REG1AP05451 166 aa11.85□□□□□ -0.51
CXCL1-202ENST00000509101 GNB3P16520 340 aa11.85□□□□□ -0.51
CXCL1-202ENST00000509101 GABARAPL2P60520 117 aa11.85□□□□□ -0.51
CXCL1-202ENST00000509101 RPL30P62888 115 aaKnown RBP11.85□□□□□ -0.51
CXCL1-202ENST00000509101 FABP5Q01469 135 aa11.85□□□□□ -0.51
CXCL1-202ENST00000509101 SSX1Q16384 188 aa11.85□□□□□ -0.51
CXCL1-202ENST00000509101 SLC38A6Q8IZM9 456 aa11.85□□□□□ -0.51
CXCL1-202ENST00000509101 ZNF645Q8N7E2 425 aa11.85□□□□□ -0.51
CXCL1-202ENST00000509101 GATAD1Q8WUU5 269 aa11.85□□□□□ -0.51
CXCL1-202ENST00000509101 MARC2Q969Z3 335 aa11.85□□□□□ -0.51
CXCL1-202ENST00000509101 PRELID3BQ9Y3B1 194 aa11.85□□□□□ -0.51
CXCL1-202ENST00000509101 IGKV1D-8A0A087WSZ0 117 aa11.84□□□□□ -0.51
CXCL1-202ENST00000509101 MFNGO00587 321 aa11.84□□□□□ -0.51
CXCL1-202ENST00000509101 DHFRP00374 187 aa11.84□□□□□ -0.51
CXCL1-202ENST00000509101 CRYGCP07315 174 aa11.84□□□□□ -0.51
CXCL1-202ENST00000509101 ZNF735P0CB33 412 aa11.84□□□□□ -0.51
CXCL1-202ENST00000509101 C8orf88P0DMB2 117 aa11.84□□□□□ -0.51
CXCL1-202ENST00000509101 RPL35AP18077 110 aaKnown RBP11.84□□□□□ -0.51
CXCL1-202ENST00000509101 PSMB6P28072 239 aa11.84□□□□□ -0.51
CXCL1-202ENST00000509101 GPR183P32249 361 aa11.84□□□□□ -0.51
CXCL1-202ENST00000509101 ARFRP1Q13795 201 aa11.84□□□□□ -0.51
CXCL1-202ENST00000509101 HES5Q5TA89 166 aa11.84□□□□□ -0.51
CXCL1-202ENST00000509101 ZNF367Q7RTV3 350 aa11.84□□□□□ -0.51
CXCL1-202ENST00000509101 SPARTQ8N0X7 666 aa11.84□□□□□ -0.51
CXCL1-202ENST00000509101 STPG3Q8N7X2 389 aa11.84□□□□□ -0.51
CXCL1-202ENST00000509101 TMEM167AQ8TBQ9 72 aa11.84□□□□□ -0.51
CXCL1-202ENST00000509101 OR2A7Q96R45 310 aa11.84□□□□□ -0.51
CXCL1-202ENST00000509101 SPAG8Q99932 426 aaPredicted RBP11.84□□□□□ -0.51
CXCL1-202ENST00000509101 Q9H521 79 aa11.84□□□□□ -0.51
CXCL1-202ENST00000509101 KIR2DL5BA0A0G2JN68 375 aa11.83□□□□□ -0.52
CXCL1-202ENST00000509101 KIR2DL5BA0A0G2JPC4 375 aa11.83□□□□□ -0.52
CXCL1-202ENST00000509101 ARL6IP5O75915 188 aa11.83□□□□□ -0.52
CXCL1-202ENST00000509101 S1PR2O95136 353 aa11.83□□□□□ -0.52
CXCL1-202ENST00000509101 MYOD1P15172 320 aa11.83□□□□□ -0.52
CXCL1-202ENST00000509101 HIST1H1BP16401 226 aaKnown RBP11.83□□□□□ -0.52
CXCL1-202ENST00000509101 HIST1H1DP16402 221 aaKnown RBP11.83□□□□□ -0.52
CXCL1-202ENST00000509101 CTRB1P17538 263 aa11.83□□□□□ -0.52
CXCL1-202ENST00000509101 GADD45AP24522 165 aa11.83□□□□□ -0.52
CXCL1-202ENST00000509101 CALRP27797 417 aaKnown RBP11.83□□□□□ -0.52
CXCL1-202ENST00000509101 FCGR2BP31994 310 aaPredicted RBP11.83□□□□□ -0.52
CXCL1-202ENST00000509101 ODF3L2Q3SX64 289 aa11.83□□□□□ -0.52
CXCL1-202ENST00000509101 CTRB2Q6GPI1 263 aa11.83□□□□□ -0.52
CXCL1-202ENST00000509101 PUSL1Q8N0Z8 303 aaKnown RBP11.83□□□□□ -0.52
CXCL1-202ENST00000509101 KIR2DL5AQ8N109 375 aa11.83□□□□□ -0.52
CXCL1-202ENST00000509101 OR10R2Q8NGX6 335 aa11.83□□□□□ -0.52
CXCL1-202ENST00000509101 OR4S2Q8NH73 311 aa11.83□□□□□ -0.52
CXCL1-202ENST00000509101 KIR2DL5BQ8NHK3 375 aa11.83□□□□□ -0.52
CXCL1-202ENST00000509101 VSTM2AQ8TAG5 236 aa11.83□□□□□ -0.52
CXCL1-202ENST00000509101 MRPL27Q9P0M9 148 aaKnown RBP11.83□□□□□ -0.52
CXCL1-202ENST00000509101 RAB22AQ9UL26 194 aa11.83□□□□□ -0.52
CXCL1-202ENST00000509101 RBMX2Q9Y388 322 aaKnown RBP11.83□□□□□ -0.52
CXCL1-202ENST00000509101 IGLV11-55A0A075B6I3 123 aa11.82□□□□□ -0.52
CXCL1-202ENST00000509101 TRBV7-1A0A0A6YYK4 115 aa11.82□□□□□ -0.52
CXCL1-202ENST00000509101 CLEC3BP05452 202 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms