RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 SSX5O60225 188 aa12.43□□□□□ -0.42
LMNA-222ENST00000508500 IGLV2-14P01704 120 aa12.43□□□□□ -0.42
LMNA-222ENST00000508500 DTYMKP23919 212 aa12.43□□□□□ -0.42
LMNA-222ENST00000508500 DYRK1AQ13627 763 aa12.43□□□□□ -0.42
LMNA-222ENST00000508500 SBSPONQ8IVN8 264 aa12.43□□□□□ -0.42
LMNA-222ENST00000508500 GINS4Q9BRT9 223 aa12.43□□□□□ -0.42
LMNA-222ENST00000508500 SMAD5-AS1Q9Y6J3 95 aa12.43□□□□□ -0.42
LMNA-222ENST00000508500 H3BUA1 57 aa12.42□□□□□ -0.42
LMNA-222ENST00000508500 CNIH1O95406 144 aa12.42□□□□□ -0.42
LMNA-222ENST00000508500 BRI3O95415 125 aa12.42□□□□□ -0.42
LMNA-222ENST00000508500 APELAP0DMC3 54 aa12.42□□□□□ -0.42
LMNA-222ENST00000508500 GP9P14770 177 aa12.42□□□□□ -0.42
LMNA-222ENST00000508500 RPL30P62888 115 aaKnown RBP12.42□□□□□ -0.42
LMNA-222ENST00000508500 TAGLNQ01995 201 aaKnown RBP12.42□□□□□ -0.42
LMNA-222ENST00000508500 MZT2BQ6NZ67 158 aa12.42□□□□□ -0.42
LMNA-222ENST00000508500 IDO2Q6ZQW0 420 aa12.42□□□□□ -0.42
LMNA-222ENST00000508500 NUDCD2Q8WVJ2 157 aa12.42□□□□□ -0.42
LMNA-222ENST00000508500 TRIM63Q969Q1 353 aa12.42□□□□□ -0.42
LMNA-222ENST00000508500 ST6GALNAC5Q9BVH7 336 aa12.42□□□□□ -0.42
LMNA-222ENST00000508500 TINAGL1Q9GZM7 467 aaPredicted RBP12.42□□□□□ -0.42
LMNA-222ENST00000508500 ZNF355PQ9NSJ1 428 aa12.42□□□□□ -0.42
LMNA-222ENST00000508500 RBM7Q9Y580 266 aaKnown RBP12.42□□□□□ -0.42
LMNA-222ENST00000508500 IGKV1D-13A0A0B4J2D9 117 aa12.41□□□□□ -0.42
LMNA-222ENST00000508500 ANKRD34BA5PLL1 514 aa12.41□□□□□ -0.42
LMNA-222ENST00000508500 TMEM235A6NFC5 223 aa12.41□□□□□ -0.42
LMNA-222ENST00000508500 NAP1L6A6NFF2 107 aa12.41□□□□□ -0.42
LMNA-222ENST00000508500 CENPXA8MT69 81 aa12.41□□□□□ -0.42
LMNA-222ENST00000508500 CRYZL1O95825 349 aa12.41□□□□□ -0.42
LMNA-222ENST00000508500 TRBV12-3P01733 135 aa12.41□□□□□ -0.42
LMNA-222ENST00000508500 IGKV1-13P0DP09 117 aa12.41□□□□□ -0.42
LMNA-222ENST00000508500 NFYAP23511 347 aaPredicted RBP12.41□□□□□ -0.42
LMNA-222ENST00000508500 CBX5P45973 191 aa12.41□□□□□ -0.42
LMNA-222ENST00000508500 UBE2KP61086 200 aa12.41□□□□□ -0.42
LMNA-222ENST00000508500 OXA1LQ15070 435 aa12.41□□□□□ -0.42
LMNA-222ENST00000508500 RTL8BQ17RB0 113 aa12.41□□□□□ -0.42
LMNA-222ENST00000508500 IL34Q6ZMJ4 242 aa12.41□□□□□ -0.42
LMNA-222ENST00000508500 OVCH2Q7RTZ1 564 aa12.41□□□□□ -0.42
LMNA-222ENST00000508500 SNX29P2Q8IUI4 249 aa12.41□□□□□ -0.42
LMNA-222ENST00000508500 TEX45Q8NA69 505 aa12.41□□□□□ -0.42
LMNA-222ENST00000508500 GPX8Q8TED1 209 aa12.41□□□□□ -0.42
LMNA-222ENST00000508500 MTFP1Q9UDX5 166 aa12.41□□□□□ -0.42
LMNA-222ENST00000508500 MSGN1A6NI15 193 aa12.4□□□□□ -0.42
LMNA-222ENST00000508500 IGLV1-51P01701 117 aa12.4□□□□□ -0.42
LMNA-222ENST00000508500 RRASP10301 218 aa12.4□□□□□ -0.42
LMNA-222ENST00000508500 BRWD1-AS2P59051 145 aa12.4□□□□□ -0.42
LMNA-222ENST00000508500 EIF4EBP1Q13541 118 aaPredicted RBP12.4□□□□□ -0.42
LMNA-222ENST00000508500 PRSS8Q16651 343 aa12.4□□□□□ -0.42
LMNA-222ENST00000508500 Q8N1Y9 231 aa12.4□□□□□ -0.42
LMNA-222ENST00000508500 TOMM5Q8N4H5 51 aa12.4□□□□□ -0.42
LMNA-222ENST00000508500 ZNF645Q8N7E2 425 aa12.4□□□□□ -0.42
LMNA-222ENST00000508500 ADTRPQ96IZ2 230 aa12.4□□□□□ -0.42
LMNA-222ENST00000508500 TMEM68Q96MH6 324 aa12.4□□□□□ -0.42
LMNA-222ENST00000508500 RANGRFQ9HD47 186 aaPredicted RBP12.4□□□□□ -0.42
LMNA-222ENST00000508500 OR2W1Q9Y3N9 320 aa12.4□□□□□ -0.42
LMNA-222ENST00000508500 DYNC2H1Q8NCM8 4307 aaKnown RBP12.4□□□□□ -0.43
LMNA-222ENST00000508500 C13orf42A0A1B0GVH6 325 aa12.39□□□□□ -0.43
LMNA-222ENST00000508500 FAUP35544 74 aaKnown RBP12.39□□□□□ -0.43
LMNA-222ENST00000508500 KLF5Q13887 457 aaPredicted RBP12.39□□□□□ -0.43
LMNA-222ENST00000508500 TNXAQ16473 311 aa12.39□□□□□ -0.43
LMNA-222ENST00000508500 TRIM16LQ309B1 348 aa12.39□□□□□ -0.43
LMNA-222ENST00000508500 ZNF57Q68EA5 555 aaPredicted RBP12.39□□□□□ -0.43
LMNA-222ENST00000508500 ZNF343Q6P1L6 599 aa12.39□□□□□ -0.43
LMNA-222ENST00000508500 ADAD2Q8NCV1 583 aaKnown RBP12.39□□□□□ -0.43
LMNA-222ENST00000508500 OR52I2Q8NH67 350 aa12.39□□□□□ -0.43
LMNA-222ENST00000508500 SRSF12Q8WXF0 261 aaKnown RBP12.39□□□□□ -0.43
LMNA-222ENST00000508500 OR4C12Q96R67 309 aa12.39□□□□□ -0.43
LMNA-222ENST00000508500 ZNF430Q9H8G1 570 aaPredicted RBP12.39□□□□□ -0.43
LMNA-222ENST00000508500 TBC1D24Q9ULP9 559 aa12.39□□□□□ -0.43
LMNA-222ENST00000508500 A0A0G2JLM5 398 aa12.38□□□□□ -0.43
LMNA-222ENST00000508500 ANKRD20A5PA0PJZ0 165 aa12.38□□□□□ -0.43
LMNA-222ENST00000508500 FRMD6-AS1P0C7T7 363 aa12.38□□□□□ -0.43
LMNA-222ENST00000508500 SAA1P0DJI8 122 aaPredicted RBP12.38□□□□□ -0.43
LMNA-222ENST00000508500 CBX3Q13185 183 aa12.38□□□□□ -0.43
LMNA-222ENST00000508500 VMA21Q3ZAQ7 101 aa12.38□□□□□ -0.43
LMNA-222ENST00000508500 C10orf55Q5SWW7 151 aa12.38□□□□□ -0.43
LMNA-222ENST00000508500 OSR1Q8TAX0 266 aaPredicted RBP12.38□□□□□ -0.43
LMNA-222ENST00000508500 COA4Q9NYJ1 87 aa12.38□□□□□ -0.43
LMNA-222ENST00000508500 COPZ2Q9P299 210 aa12.38□□□□□ -0.43
LMNA-222ENST00000508500 PLA2G10O15496 165 aa12.37□□□□□ -0.43
LMNA-222ENST00000508500 LYRM1O43325 122 aa12.37□□□□□ -0.43
LMNA-222ENST00000508500 FCGR3BO75015 233 aa12.37□□□□□ -0.43
LMNA-222ENST00000508500 TUSC2O75896 110 aa12.37□□□□□ -0.43
LMNA-222ENST00000508500 PRH1P02810 166 aa12.37□□□□□ -0.43
LMNA-222ENST00000508500 CTXN2P0C2S0 81 aa12.37□□□□□ -0.43
LMNA-222ENST00000508500 PTHLHP12272 177 aa12.37□□□□□ -0.43
LMNA-222ENST00000508500 TBPP20226 339 aa12.37□□□□□ -0.43
LMNA-222ENST00000508500 RCVRNP35243 200 aa12.37□□□□□ -0.43
LMNA-222ENST00000508500 GNG2P59768 71 aa12.37□□□□□ -0.43
LMNA-222ENST00000508500 KLF9Q13886 244 aaPredicted RBP12.37□□□□□ -0.43
LMNA-222ENST00000508500 CDK10Q15131 360 aa12.37□□□□□ -0.43
LMNA-222ENST00000508500 OR2B11Q5JQS5 317 aa12.37□□□□□ -0.43
LMNA-222ENST00000508500 Q6ZNX1 250 aa12.37□□□□□ -0.43
LMNA-222ENST00000508500 VKORC1L1Q8N0U8 176 aa12.37□□□□□ -0.43
LMNA-222ENST00000508500 CENPSQ8N2Z9 138 aa12.37□□□□□ -0.43
LMNA-222ENST00000508500 TMEM229BQ8NBD8 167 aa12.37□□□□□ -0.43
LMNA-222ENST00000508500 DUSP18Q8NEJ0 188 aa12.37□□□□□ -0.43
LMNA-222ENST00000508500 GPHA2Q96T91 129 aa12.37□□□□□ -0.43
LMNA-222ENST00000508500 PEF1Q9UBV8 284 aaKnown RBP12.37□□□□□ -0.43
LMNA-222ENST00000508500 ANXA10Q9UJ72 324 aa12.37□□□□□ -0.43
LMNA-222ENST00000508500 TENM2Q9NT68 2774 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms