RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 BRD3OSQ6XYD6 125 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 ATG4DQ86TL0 474 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 MMD2Q8IY49 270 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 RNF152Q8N8N0 203 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 OR5AP2Q8NGF4 316 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 MRGPRFQ96AM1 343 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 RPUSD4Q96CM3 377 aaKnown RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 NTNG2Q96CW9 530 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 WDFY2Q96P53 400 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 PPIL3Q9H2H8 161 aaKnown RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 MGST3O14880 152 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 JTBO76095 146 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 GDNFP39905 211 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 PSG4Q00888 419 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 PRB3Q04118 309 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 CIRBPQ14011 172 aaKnown RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 SLC35E4Q6ICL7 350 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 FAM159AQ6UWV7 190 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 RTN4RL2Q86UN3 420 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 RFLNBQ8N5W9 214 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 NUDT10Q8NFP7 164 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 OR9G4Q8NGQ1 327 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 LINC01587Q99440 93 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 C1orf43Q9BWL3 253 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 AK3Q9UIJ7 227 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 TLN1Q9Y490 2541 aaKnown RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 A0A087WX48 190 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 G3V3Q6 166 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 J3QR06 171 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 J3QR89 54 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 SYNGR1O43759 233 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 SOX15O60248 233 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 CA11O75493 328 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 LY6HO94772 140 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 GPX1P07203 203 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 GP9P14770 177 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 UBE2L3P68036 154 aaKnown RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 IGLV3-21P80748 117 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 FABP9Q0Z7S8 132 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 HERPUD1Q15011 391 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 HMGN3Q15651 99 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 ABHD12Q8N2K0 398 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 NANOGP1Q8N7R0 232 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 OR8B12Q8NGG6 310 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 OR4P4Q8NGL7 312 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 OR4X1Q8NH49 305 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 RNF138Q8WVD3 245 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 GEMIN7Q9H840 131 aaKnown RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 NSG2Q9Y328 171 aa2.5□□□□□ -2.01
NEDD4-208ENST00000508342 SIRT4Q9Y6E7 314 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-208ENST00000508342 IGHV3-21A0A0B4J1V1 117 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 PSPNO60542 156 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 OR5AL1P0C617 328 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 NHLH2Q02577 135 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 AESQ08117 197 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF415Q09FC8 603 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 KLF9Q13886 244 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-208ENST00000508342 FBLN7Q53RD9 439 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF474Q6S9Z5 364 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-208ENST00000508342 LRP11Q86VZ4 500 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 RIMKLAQ8IXN7 391 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 KLHL30-AS1Q8NEE0 82 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 AQP10Q96PS8 301 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 DUX3Q96PT4 197 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 DPM3Q9P2X0 92 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 SULT1A1P50225 295 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 GP2P55259 537 aaKnown RBP2.49□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM249Q2WGJ8 235 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF620Q6ZNG0 422 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 NRARPQ7Z6K4 114 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 HAPLN4Q86UW8 402 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 APRG1Q8IVJ8 170 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 ZCCHC24Q8N2G6 241 aaKnown RBP2.49□□□□□ -2.01
NEDD4-208ENST00000508342 OR8B4Q96RC9 309 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 FLVCR2Q9UPI3 526 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 MRPS16Q9Y3D3 137 aaKnown RBP2.49□□□□□ -2.01
NEDD4-208ENST00000508342 LRP12Q9Y561 859 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 WSB1Q9Y6I7 421 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 ABCA12Q86UK0 2595 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 ARRDC5A6NEK1 342 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 SUMO2P61956 95 aaKnown RBP2.49□□□□□ -2.01
NEDD4-208ENST00000508342 RPS27AP62979 156 aaKnown RBP2.49□□□□□ -2.01
NEDD4-208ENST00000508342 UBA52P62987 128 aaKnown RBP2.49□□□□□ -2.01
NEDD4-208ENST00000508342 FFAR4Q5NUL3 377 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 LDLRAD2Q5SZI1 272 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 WDR25Q64LD2 544 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-208ENST00000508342 TBC1D26Q86UD7 250 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 WFDC11Q8NEX6 87 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 Q8NFD4 153 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 OR1N2Q8NGR9 330 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 OR4Q3Q8NH05 313 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 MYOZ3Q8TDC0 251 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 PTX4Q96A99 478 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 WDR89Q96FK6 387 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-208ENST00000508342 FAM110AQ9BQ89 295 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 NEURL2Q9BR09 285 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 ANKRD60Q9BZ19 345 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 NKX6-2Q9C056 277 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-208ENST00000508342 LIME1Q9H400 295 aa2.49□□□□□ -2.01
NEDD4-208ENST00000508342 SLC2A9Q9NRM0 540 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms