RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 FAM223BA6NKX1 122 aa10.88□□□□□ -0.67
RAB28-205ENST00000508274 BMPR1BO00238 502 aa10.88□□□□□ -0.67
RAB28-205ENST00000508274 OR2J3O76001 311 aa10.88□□□□□ -0.67
RAB28-205ENST00000508274 IL6RP08887 468 aaPredicted RBP10.88□□□□□ -0.67
RAB28-205ENST00000508274 TIMM50Q3ZCQ8 353 aa10.88□□□□□ -0.67
RAB28-205ENST00000508274 FAM223AQ8IWN6 122 aa10.88□□□□□ -0.67
RAB28-205ENST00000508274 Q8N1Y9 231 aa10.88□□□□□ -0.67
RAB28-205ENST00000508274 FYTTD1Q96QD9 318 aaKnown RBP10.88□□□□□ -0.67
RAB28-205ENST00000508274 SLC5A7Q9GZV3 580 aa10.88□□□□□ -0.67
RAB28-205ENST00000508274 SULT1C2O00338 296 aa10.87□□□□□ -0.67
RAB28-205ENST00000508274 XRCC3O43542 346 aa10.87□□□□□ -0.67
RAB28-205ENST00000508274 AREGP15514 252 aa10.87□□□□□ -0.67
RAB28-205ENST00000508274 RPL27AP46776 148 aaKnown RBP10.87□□□□□ -0.67
RAB28-205ENST00000508274 ATP5G2Q06055 141 aa10.87□□□□□ -0.67
RAB28-205ENST00000508274 ZNF818PQ6ZRF7 136 aa10.87□□□□□ -0.67
RAB28-205ENST00000508274 TMEM17Q86X19 198 aa10.87□□□□□ -0.67
RAB28-205ENST00000508274 TSPAN14Q8NG11 270 aa10.87□□□□□ -0.67
RAB28-205ENST00000508274 OR5AP2Q8NGF4 316 aa10.87□□□□□ -0.67
RAB28-205ENST00000508274 VSTM2AQ8TAG5 236 aa10.87□□□□□ -0.67
RAB28-205ENST00000508274 PPP5D1E7EU14 171 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 CSN3P07498 182 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 ZNF735P0CB33 412 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 IGHV4-30-4P0DP06 118 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 MSMO1Q15800 293 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 C15orf32Q32M92 178 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 UBE2NLQ5JXB2 153 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 SPAG16Q8N0X2 631 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 SAMD12Q8N8I0 201 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 RCHY1Q96PM5 261 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 IFT46Q9NQC8 304 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 S4R3C0 116 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 A0A087WXM4 84 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.86□□□□□ -0.67
RAB28-205ENST00000508274 IZUMO1RA6ND01 250 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 CGB1A6NKQ9 187 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 TMEM127O75204 238 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 TNFAIP8O95379 198 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 HRASP01112 189 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 IGHV3-23P01764 117 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 KIR2DS2P43631 304 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 CBX5P45973 191 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 TAS2R20P59543 309 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 TMEM69Q5SWH9 247 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 OR4A47Q6IF82 309 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 CROCCP3Q8IVE0 287 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 NECAP1Q8NC96 275 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 OR51H1Q8NH63 302 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 S100A16Q96FQ6 103 aaKnown RBP10.86□□□□□ -0.67
RAB28-205ENST00000508274 EHFQ9NZC4 300 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 ZNF257Q9Y2Q1 563 aa10.86□□□□□ -0.67
RAB28-205ENST00000508274 TRAV3A0A0B4J244 114 aa10.85□□□□□ -0.67
RAB28-205ENST00000508274 DPPA5A6NC42 116 aa10.85□□□□□ -0.67
RAB28-205ENST00000508274 NPIPB5A8MRT5 1133 aa10.85□□□□□ -0.67
RAB28-205ENST00000508274 HLA-AP01891 365 aaKnown RBP10.85□□□□□ -0.67
RAB28-205ENST00000508274 REG1AP05451 166 aa10.85□□□□□ -0.67
RAB28-205ENST00000508274 EDN2P20800 178 aa10.85□□□□□ -0.67
RAB28-205ENST00000508274 RPL8P62917 257 aaKnown RBP10.85□□□□□ -0.67
RAB28-205ENST00000508274 ADAMTSL5Q6ZMM2 481 aa10.85□□□□□ -0.67
RAB28-205ENST00000508274 SLC25A42Q86VD7 318 aa10.85□□□□□ -0.67
RAB28-205ENST00000508274 ZBTB34Q8NCN2 500 aa10.85□□□□□ -0.67
RAB28-205ENST00000508274 GIMAP1Q8WWP7 306 aa10.85□□□□□ -0.67
RAB28-205ENST00000508274 FANCD2OSQ96PS1 177 aa10.85□□□□□ -0.67
RAB28-205ENST00000508274 VCX3AQ9NNX9 186 aa10.85□□□□□ -0.67
RAB28-205ENST00000508274 SLC2A9Q9NRM0 540 aa10.85□□□□□ -0.67
RAB28-205ENST00000508274 BET1LQ9NYM9 111 aa10.85□□□□□ -0.67
RAB28-205ENST00000508274 FBXL7Q9UJT9 491 aa10.85□□□□□ -0.67
RAB28-205ENST00000508274 ANAPC10Q9UM13 185 aa10.85□□□□□ -0.67
RAB28-205ENST00000508274 DMRT1Q9Y5R6 373 aa10.85□□□□□ -0.67
RAB28-205ENST00000508274 DNAH7Q8WXX0 4024 aa10.85□□□□□ -0.67
RAB28-205ENST00000508274 PMP2P02689 132 aa10.84□□□□□ -0.67
RAB28-205ENST00000508274 EIF4EP06730 217 aaKnown RBP10.84□□□□□ -0.67
RAB28-205ENST00000508274 RPA2P15927 270 aa10.84□□□□□ -0.67
RAB28-205ENST00000508274 HLA-GP17693 338 aa10.84□□□□□ -0.67
RAB28-205ENST00000508274 GNRHRP30968 328 aa10.84□□□□□ -0.67
RAB28-205ENST00000508274 MAS1LP35410 378 aa10.84□□□□□ -0.67
RAB28-205ENST00000508274 RFX2P48378 723 aa10.84□□□□□ -0.67
RAB28-205ENST00000508274 NCS1P62166 190 aa10.84□□□□□ -0.67
RAB28-205ENST00000508274 CATR1Q13166 79 aa10.84□□□□□ -0.67
RAB28-205ENST00000508274 TATDN3Q17R31 274 aa10.84□□□□□ -0.67
RAB28-205ENST00000508274 THAP7Q9BT49 309 aaPredicted RBP10.84□□□□□ -0.67
RAB28-205ENST00000508274 HRASLSQ9HDD0 168 aa10.84□□□□□ -0.67
RAB28-205ENST00000508274 H0Y980 276 aa10.83□□□□□ -0.68
RAB28-205ENST00000508274 RBFOX2O43251 390 aaKnown RBP eCLIP10.83□□□□□ -0.68
RAB28-205ENST00000508274 S1PR2O95136 353 aa10.83□□□□□ -0.68
RAB28-205ENST00000508274 NDUFB8O95169 186 aa10.83□□□□□ -0.68
RAB28-205ENST00000508274 CRYGCP07315 174 aa10.83□□□□□ -0.68
RAB28-205ENST00000508274 CTRB1P17538 263 aa10.83□□□□□ -0.68
RAB28-205ENST00000508274 PSMB6P28072 239 aa10.83□□□□□ -0.68
RAB28-205ENST00000508274 HERV-K104P61576 105 aa10.83□□□□□ -0.68
RAB28-205ENST00000508274 AADACL3Q5VUY0 350 aa10.83□□□□□ -0.68
RAB28-205ENST00000508274 CTRB2Q6GPI1 263 aa10.83□□□□□ -0.68
RAB28-205ENST00000508274 SLC25A46Q96AG3 418 aa10.83□□□□□ -0.68
RAB28-205ENST00000508274 CCDC140Q96MF4 163 aa10.83□□□□□ -0.68
RAB28-205ENST00000508274 ZNF2Q9BSG1 426 aaPredicted RBP10.83□□□□□ -0.68
RAB28-205ENST00000508274 FUNDC2Q9BWH2 189 aa10.83□□□□□ -0.68
RAB28-205ENST00000508274 C19orf73Q9NVV2 129 aa10.83□□□□□ -0.68
RAB28-205ENST00000508274 SIGLEC8Q9NYZ4 499 aa10.83□□□□□ -0.68
RAB28-205ENST00000508274 PEMTQ9UBM1 199 aa10.83□□□□□ -0.68
RAB28-205ENST00000508274 HPRT1P00492 218 aa10.82□□□□□ -0.68
RAB28-205ENST00000508274 TAS2R31P59538 309 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms