RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 DIRC3C9JPN6 131 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 K7ESF4 209 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 ITGB1BP1O14713 200 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 SMPD2O60906 423 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 ZNF253O75346 499 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 SERF1AO75920 110 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 WISP2O76076 250 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 MT-CO3P00414 261 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 CRYAAP02489 173 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 AMY1AP04745 511 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 NPPCP23582 126 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 HOXC12P31275 282 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 GABRA2P47869 451 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 GNG4P50150 75 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 RAB7AP51149 207 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 RPL30P62888 115 aaKnown RBP4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 ZNF718Q3SXZ3 478 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 SPATA46Q5T0L3 261 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 C9orf135Q5VTT2 229 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 FBXW9Q5XUX1 488 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 INO80CQ6PI98 192 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 TEPPQ6URK8 271 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 PQLC2Q6ZP29 291 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 Q6ZWC4 215 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 MDP1Q86V88 176 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 FAM90A1Q86YD7 464 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 MMD2Q8IY49 270 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 OR2D3Q8NGH3 330 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 OR52L2PQ8NGH6 319 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 OR4S2Q8NH73 311 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 OCC1Q8TAD7 63 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 BORCS7Q96B45 105 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 ADTRPQ96IZ2 230 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 THOC3Q96J01 351 aaKnown RBP4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 KCNS1Q96KK3 526 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 ATG101Q9BSB4 218 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 GGTLC1Q9BX51 225 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 OPN3Q9H1Y3 402 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 LPAR2Q9HBW0 351 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 DEPPQ9NTK1 212 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 MRPL27Q9P0M9 148 aaKnown RBP4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 IL19Q9UHD0 177 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 IL17BQ9UHF5 180 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 JPT1Q9UK76 154 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 CDC42EP3Q9UKI2 254 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 PILRBQ9UKJ0 227 aa4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 KLF13Q9Y2Y9 288 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P16-201ENST00000508037 CENPFP49454 3210 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 HELTA6NFD8 242 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 SNURFLB1AK76 121 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 KLRC4-KLRK1H3BQV0 150 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 ISLRO14498 428 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 CFIP05156 583 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 GPX1P07203 203 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 IL6RP08887 468 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 CCL4P13236 92 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 IRF2P14316 349 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 CBLN1P23435 193 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 NPY1RP25929 384 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 DUTP33316 252 aaKnown RBP4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 VDAC2P45880 294 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 IER3P46695 156 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 HNRNPA3P51991 378 aaKnown RBP4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 KRTDAPP60985 99 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 RPL31P62899 125 aaKnown RBP4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 CX3CL1P78423 397 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 TLE1Q04724 770 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 Q0VFX4 171 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 OR5I1Q13606 314 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 TRIP6Q15654 476 aaKnown RBP4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 EFNB3Q15768 340 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 TMEM30BQ3MIR4 351 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 SPATA45Q537H7 98 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 ZNF766Q5HY98 468 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 PMS2CLQ68D20 193 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 ACP7Q6ZNF0 438 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 FAM214BQ7L5A3 538 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 LRP11Q86VZ4 500 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 PNKDQ8N490 385 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 VN1R17PQ8TDU5 208 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 CT55Q8WUE5 264 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 ORAOV1Q8WV07 137 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 EAF1Q96JC9 268 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 S1PR3Q99500 378 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 MGST2Q99735 147 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 TXN2Q99757 166 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 LRFN3Q9BTN0 628 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 DERL1Q9BUN8 251 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 MRPL32Q9BYC8 188 aaKnown RBP4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 TTTY12Q9BZ98 90 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 COMMD5Q9GZQ3 224 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 NCOR1P1Q9H4R4 102 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 OBP2BQ9NPH6 170 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 ZNF331Q9NQX6 463 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 SLC35D1Q9NTN3 355 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 BET1LQ9NYM9 111 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 TECRQ9NZ01 308 aaKnown RBP4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 GNG12Q9UBI6 72 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 NAT8BQ9UHF3 227 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms