RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 PRAMEF5Q5TYX0 476 aa11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 ACP7Q6ZNF0 438 aa11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 HEYLQ9NQ87 328 aaPredicted RBP11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 PRSS46E5RG02 174 aa11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 CXorf1O96002 111 aa11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 IRF2P14316 349 aa11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 RPL31P62899 125 aaKnown RBP11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 TGFBR3Q03167 851 aa11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 KRTCAP3Q53RY4 240 aa11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 TCTEX1D1Q8N7M0 179 aa11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 KLF14Q8TD94 323 aaPredicted RBP11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 FOXJ2Q9P0K8 574 aa11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 FZR1Q9UM11 496 aa11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 PAM16Q9Y3D7 125 aa11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 RNF114Q9Y508 228 aa11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 FOXH1O75593 365 aa11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 CER1O95813 267 aa11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 CRISP2P16562 243 aa11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 DUTP33316 252 aaKnown RBP11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 VDAC2P45880 294 aaPredicted RBP11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 TPPP2P59282 170 aa11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 EDDM3AQ14507 147 aa11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 DCAF10Q5QP82 559 aa11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 OR1L6Q8NGR2 347 aa11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 SEPSECSQ9HD40 501 aaKnown RBP11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 IL36BQ9NZH7 164 aa11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 SPRR3Q9UBC9 169 aa11.13□□□□□ -0.63
SNCAIP-209ENST00000508017 C9orf172C9J069 976 aa11.12□□□□□ -0.63
SNCAIP-209ENST00000508017 IGHV1-2P23083 117 aa11.12□□□□□ -0.63
SNCAIP-209ENST00000508017 MRPL49Q13405 166 aaKnown RBP11.12□□□□□ -0.63
SNCAIP-209ENST00000508017 WDR82Q6UXN9 313 aa11.12□□□□□ -0.63
SNCAIP-209ENST00000508017 TEX43Q6ZNM6 134 aa11.12□□□□□ -0.63
SNCAIP-209ENST00000508017 VN1R17PQ8TDU5 208 aa11.12□□□□□ -0.63
SNCAIP-209ENST00000508017 TRIOBPQ9H2D6 2365 aa11.12□□□□□ -0.63
SNCAIP-209ENST00000508017 A0A1B0GWJ7 208 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 C15orf65H3BRN8 121 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 GFRA3O60609 400 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 MPDU1O75352 247 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 GCHFRP30047 84 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 IER3P46695 156 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 GPR12P47775 334 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 OR5I1Q13606 314 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 RPL39P5Q59GN2 51 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 OR4A16Q8NH70 328 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 TMEM208Q9BTX3 173 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 MSL2Q9HCI7 577 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 TNRC18O15417 2968 aaPredicted RBP11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 TNFSF13O75888 250 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 AGFG2O95081 481 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 SP1P08047 785 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 IL6RP08887 468 aaPredicted RBP11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 AARDQ4LEZ3 155 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 GCNT2Q8N0V5 402 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 C20orf144Q9BQM9 153 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 SPRY4Q9C004 299 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 ABI3Q9P2A4 366 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 LOC400499M0QZD8 3231 aa11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 SPENQ96T58 3664 aaKnown RBP11.11□□□□□ -0.63
SNCAIP-209ENST00000508017 J3QW42 95 aa11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 M0R1X1 148 aa11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 FCN1O00602 326 aa11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 RPLP1P05386 114 aaKnown RBP11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 NPSP0C0P6 89 aa11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 COMPP49747 757 aaPredicted RBP11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 LGALS4P56470 323 aa11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 PAFAH1B2P68402 229 aa11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 LPAL2Q16609 132 aa11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 RNFT1Q5M7Z0 435 aa11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 BAGE3Q86Y29 109 aa11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 BAGE2Q86Y30 109 aa11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 CD177Q8N6Q3 437 aa11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 WDR31Q8NA23 367 aa11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 MIEN1Q9BRT3 115 aa11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 A0A1W2PNU3 283 aaPredicted RBP11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 SPINK4O60575 86 aa11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 TDGF1P13385 188 aa11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 EFNB3Q15768 340 aa11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 ARSJQ5FYB0 599 aaPredicted RBP11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 UTF1Q5T230 341 aa11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 PRR7Q8TB68 274 aa11.1□□□□□ -0.63
SNCAIP-209ENST00000508017 SNURFLB1AK76 121 aa11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 SPINT2O43291 252 aa11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 ESDP10768 282 aa11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 RELBQ01201 579 aa11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 BATFQ16520 125 aa11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 STPG3Q8N7X2 389 aa11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 OR5AU1Q8NGC0 362 aa11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 CDX2Q99626 313 aaPredicted RBP11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 TXNDC17Q9BRA2 123 aa11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 LRFN3Q9BTN0 628 aa11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 LSM4Q9Y4Z0 139 aaKnown RBP11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 DLEU1O43261 78 aa11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 TNFSF10P50591 281 aa11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 RPP30P78346 268 aaKnown RBP11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 ARG2P78540 354 aa11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 PEAR1Q5VY43 1037 aaPredicted RBP11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 MMD2Q8IY49 270 aa11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 OR8I2Q8N0Y5 310 aa11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 EAF1Q96JC9 268 aaPredicted RBP11.09□□□□□ -0.63
SNCAIP-209ENST00000508017 FAM103A1Q9BTL3 118 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms