RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 F2RL1P55085 397 aa13.98□□□□□ -0.17
RNF4-209ENST00000507784 RELBQ01201 579 aa13.98□□□□□ -0.17
RNF4-209ENST00000507784 EBI3Q14213 229 aa13.98□□□□□ -0.17
RNF4-209ENST00000507784 FBLN7Q53RD9 439 aa13.98□□□□□ -0.17
RNF4-209ENST00000507784 CLEC9AQ6UXN8 241 aa13.98□□□□□ -0.17
RNF4-209ENST00000507784 C9orf139Q6ZV77 190 aa13.98□□□□□ -0.17
RNF4-209ENST00000507784 TEX45Q8NA69 505 aa13.98□□□□□ -0.17
RNF4-209ENST00000507784 OR4D5Q8NGN0 318 aa13.98□□□□□ -0.17
RNF4-209ENST00000507784 ASB13Q8WXK3 278 aa13.98□□□□□ -0.17
RNF4-209ENST00000507784 QTRT1Q9BXR0 403 aaKnown RBP13.98□□□□□ -0.17
RNF4-209ENST00000507784 FBXL15Q9H469 300 aa13.98□□□□□ -0.17
RNF4-209ENST00000507784 MYO9AB2RTY4 2548 aa13.97□□□□□ -0.17
RNF4-209ENST00000507784 WRBO00258 174 aa13.97□□□□□ -0.17
RNF4-209ENST00000507784 RRHO14718 337 aa13.97□□□□□ -0.17
RNF4-209ENST00000507784 KBTBD11O94819 623 aa13.97□□□□□ -0.17
RNF4-209ENST00000507784 FOSL1P15407 271 aa13.97□□□□□ -0.17
RNF4-209ENST00000507784 DYNLT3P51808 116 aa13.97□□□□□ -0.17
RNF4-209ENST00000507784 RAB32Q13637 225 aa13.97□□□□□ -0.17
RNF4-209ENST00000507784 CXorf66Q5JRM2 361 aaPredicted RBP13.97□□□□□ -0.17
RNF4-209ENST00000507784 TCTE3Q8IZS6 198 aa13.97□□□□□ -0.17
RNF4-209ENST00000507784 OR4A5Q8NH83 315 aa13.97□□□□□ -0.17
RNF4-209ENST00000507784 TMEM167AQ8TBQ9 72 aa13.97□□□□□ -0.17
RNF4-209ENST00000507784 PPP1R1CQ8WVI7 109 aa13.97□□□□□ -0.17
RNF4-209ENST00000507784 MAGT1Q9H0U3 335 aa13.97□□□□□ -0.17
RNF4-209ENST00000507784 C1RLQ9NZP8 487 aa13.97□□□□□ -0.17
RNF4-209ENST00000507784 PITX3O75364 302 aa13.96□□□□□ -0.17
RNF4-209ENST00000507784 SPDEFO95238 335 aa13.96□□□□□ -0.17
RNF4-209ENST00000507784 IFNA17P01571 189 aa13.96□□□□□ -0.17
RNF4-209ENST00000507784 MBPP02686 304 aaPredicted RBP13.96□□□□□ -0.17
RNF4-209ENST00000507784 MYOD1P15172 320 aa13.96□□□□□ -0.17
RNF4-209ENST00000507784 PSMB6P28072 239 aa13.96□□□□□ -0.17
RNF4-209ENST00000507784 FGL1Q08830 312 aa13.96□□□□□ -0.17
RNF4-209ENST00000507784 Q5BKY6 102 aa13.96□□□□□ -0.17
RNF4-209ENST00000507784 Q71RC1 249 aaPredicted RBP13.96□□□□□ -0.17
RNF4-209ENST00000507784 TMEM219Q86XT9 240 aa13.96□□□□□ -0.17
RNF4-209ENST00000507784 Q8N6K4 173 aa13.96□□□□□ -0.17
RNF4-209ENST00000507784 NPBQ8NG41 125 aa13.96□□□□□ -0.17
RNF4-209ENST00000507784 TPSG1Q9NRR2 321 aa13.96□□□□□ -0.17
RNF4-209ENST00000507784 TNFRSF19Q9NS68 423 aa13.96□□□□□ -0.17
RNF4-209ENST00000507784 COA4Q9NYJ1 87 aa13.96□□□□□ -0.17
RNF4-209ENST00000507784 PRNDQ9UKY0 176 aa13.96□□□□□ -0.17
RNF4-209ENST00000507784 RCL1Q9Y2P8 373 aaKnown RBP13.96□□□□□ -0.17
RNF4-209ENST00000507784 OR51B2Q9Y5P1 312 aa13.96□□□□□ -0.17
RNF4-209ENST00000507784 FLNAP21333 2647 aaKnown RBP13.96□□□□□ -0.17
RNF4-209ENST00000507784 AKAP9Q99996 3911 aa13.96□□□□□ -0.17
RNF4-209ENST00000507784 K7EPK0 472 aa13.95□□□□□ -0.18
RNF4-209ENST00000507784 ST8SIA3O43173 380 aa13.95□□□□□ -0.18
RNF4-209ENST00000507784 OPN1MWP04001 364 aa13.95□□□□□ -0.18
RNF4-209ENST00000507784 RLN2P04090 185 aa13.95□□□□□ -0.18
RNF4-209ENST00000507784 CRYGBP07316 175 aa13.95□□□□□ -0.18
RNF4-209ENST00000507784 IL6RP08887 468 aaPredicted RBP13.95□□□□□ -0.18
RNF4-209ENST00000507784 OPN1MW2P0DN77 364 aa13.95□□□□□ -0.18
RNF4-209ENST00000507784 OPN1MW3P0DN78 364 aa13.95□□□□□ -0.18
RNF4-209ENST00000507784 POLR2GP62487 172 aaKnown RBP eCLIP13.95□□□□□ -0.18
RNF4-209ENST00000507784 GNB1P62873 340 aa13.95□□□□□ -0.18
RNF4-209ENST00000507784 IL15RAQ13261 267 aa13.95□□□□□ -0.18
RNF4-209ENST00000507784 FAM71E2Q8N5Q1 922 aa13.95□□□□□ -0.18
RNF4-209ENST00000507784 THAP6Q8TBB0 222 aa13.95□□□□□ -0.18
RNF4-209ENST00000507784 PIFOQ8TCI5 191 aa13.95□□□□□ -0.18
RNF4-209ENST00000507784 SLC25A33Q9BSK2 321 aa13.95□□□□□ -0.18
RNF4-209ENST00000507784 HINT2Q9BX68 163 aa13.95□□□□□ -0.18
RNF4-209ENST00000507784 GSX1Q9H4S2 264 aaPredicted RBP13.95□□□□□ -0.18
RNF4-209ENST00000507784 ZFP57Q9NU63 452 aa13.95□□□□□ -0.18
RNF4-209ENST00000507784 SIGLEC9Q9Y336 463 aa13.95□□□□□ -0.18
RNF4-209ENST00000507784 CREBBPQ92793 2442 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 BTBD17A6NE02 478 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 C15orf61A6NNL5 157 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 CEBPZOSA8MTT3 80 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 NDUFA3O95167 84 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 MPC2O95563 127 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 RPL8P62917 257 aaKnown RBP13.94□□□□□ -0.18
RNF4-209ENST00000507784 ID3Q02535 119 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 TNXAQ16473 311 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 AANATQ16613 207 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 SPINK9Q5DT21 86 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 Q6YL49 198 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 PPP1R27Q86WC6 154 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 MMD2Q8IY49 270 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 ZNF48Q96MX3 618 aaPredicted RBP13.94□□□□□ -0.18
RNF4-209ENST00000507784 RASL11BQ9BPW5 248 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 TEX15Q9BXT5 2789 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 COMMD5Q9GZQ3 224 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 RBKSQ9H477 322 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 ZNF430Q9H8G1 570 aaPredicted RBP13.94□□□□□ -0.18
RNF4-209ENST00000507784 TMEM160Q9NX00 188 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 FKBP11Q9NYL4 201 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 TCF19Q9Y242 345 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 POMT1Q9Y6A1 747 aa13.94□□□□□ -0.18
RNF4-209ENST00000507784 TET2Q6N021 2002 aaPredicted RBP13.93□□□□□ -0.18
RNF4-209ENST00000507784 TRAV14DV4A0A0A6YYC5 116 aa13.93□□□□□ -0.18
RNF4-209ENST00000507784 TEX50A0A1B0GTY4 177 aa13.93□□□□□ -0.18
RNF4-209ENST00000507784 A6NDX4 124 aa13.93□□□□□ -0.18
RNF4-209ENST00000507784 L7N2F9 121 aa13.93□□□□□ -0.18
RNF4-209ENST00000507784 SSSCA1O60232 199 aa13.93□□□□□ -0.18
RNF4-209ENST00000507784 MED6O75586 246 aa13.93□□□□□ -0.18
RNF4-209ENST00000507784 ACTL6BO94805 426 aa13.93□□□□□ -0.18
RNF4-209ENST00000507784 OR2F2O95006 317 aa13.93□□□□□ -0.18
RNF4-209ENST00000507784 IGHV4-59P01825 116 aa13.93□□□□□ -0.18
RNF4-209ENST00000507784 HNRNPCP07910 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
RNF4-209ENST00000507784 VAMP2P63027 116 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms