RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 DEFB125Q8N687 156 aa1.15□□□□□ -2.23
LSM6-205ENST00000507449 PTH2Q96A98 100 aa1.15□□□□□ -2.23
LSM6-205ENST00000507449 PARD6GQ9BYG4 376 aaPredicted RBP1.15□□□□□ -2.23
LSM6-205ENST00000507449 OR51I1Q9H343 314 aa1.15□□□□□ -2.23
LSM6-205ENST00000507449 OR51I2Q9H344 312 aa1.15□□□□□ -2.23
LSM6-205ENST00000507449 GPR84Q9NQS5 396 aa1.15□□□□□ -2.23
LSM6-205ENST00000507449 NYNRINQ9P2P1 1898 aaKnown RBP1.15□□□□□ -2.23
LSM6-205ENST00000507449 DICER1Q9UPY3 1922 aaKnown RBP1.15□□□□□ -2.23
LSM6-205ENST00000507449 NAV1Q8NEY1 1877 aa1.14□□□□□ -2.23
LSM6-205ENST00000507449 MUC6Q6W4X9 2439 aa1.14□□□□□ -2.23
LSM6-205ENST00000507449 MAP3K5Q99683 1374 aa1.14□□□□□ -2.23
LSM6-205ENST00000507449 A0A0J9YW62 118 aa1.14□□□□□ -2.23
LSM6-205ENST00000507449 A0A1B0GW54 56 aa1.14□□□□□ -2.23
LSM6-205ENST00000507449 INMT-MINDY4F8WBC2 141 aa1.14□□□□□ -2.23
LSM6-205ENST00000507449 H3BT86 120 aa1.14□□□□□ -2.23
LSM6-205ENST00000507449 TGOLN2O43493 480 aa1.14□□□□□ -2.23
LSM6-205ENST00000507449 C1QCP02747 245 aa1.14□□□□□ -2.23
LSM6-205ENST00000507449 CCR7P32248 378 aa1.14□□□□□ -2.23
LSM6-205ENST00000507449 EMX1Q04741 257 aaPredicted RBP1.14□□□□□ -2.23
LSM6-205ENST00000507449 ACSM3Q53FZ2 586 aa1.14□□□□□ -2.23
LSM6-205ENST00000507449 COQ5Q5HYK3 327 aa1.14□□□□□ -2.23
LSM6-205ENST00000507449 OGFRL1Q5TC84 451 aaPredicted RBP1.14□□□□□ -2.23
LSM6-205ENST00000507449 LYZL1Q6UWQ5 148 aa1.14□□□□□ -2.23
LSM6-205ENST00000507449 C5orf46Q6UWT4 87 aa1.14□□□□□ -2.23
LSM6-205ENST00000507449 SSX8Q7RTT4 187 aa1.14□□□□□ -2.23
LSM6-205ENST00000507449 C10orf67Q8IYJ2 551 aa1.14□□□□□ -2.23
LSM6-205ENST00000507449 RNF133Q8WVZ7 376 aa1.14□□□□□ -2.23
LSM6-205ENST00000507449 DIRAS2Q96HU8 199 aa1.14□□□□□ -2.23
LSM6-205ENST00000507449 OR8D2Q9GZM6 311 aa1.14□□□□□ -2.23
LSM6-205ENST00000507449 EVC2Q86UK5 1308 aa1.14□□□□□ -2.23
LSM6-205ENST00000507449 TRAV7A0A075B6U4 112 aa1.13□□□□□ -2.23
LSM6-205ENST00000507449 IGHV1-18A0A0C4DH31 117 aa1.13□□□□□ -2.23
LSM6-205ENST00000507449 IGHV1-69-2A0A0G2JMI3 117 aa1.13□□□□□ -2.23
LSM6-205ENST00000507449 KLRC4O43908 158 aa1.13□□□□□ -2.23
LSM6-205ENST00000507449 ZNF737O75373 536 aa1.13□□□□□ -2.23
LSM6-205ENST00000507449 NAPSAO96009 420 aa1.13□□□□□ -2.23
LSM6-205ENST00000507449 ISG15P05161 165 aa1.13□□□□□ -2.23
LSM6-205ENST00000507449 MARCKSL1P49006 195 aa1.13□□□□□ -2.23
LSM6-205ENST00000507449 TCL1AP56279 114 aa1.13□□□□□ -2.23
LSM6-205ENST00000507449 TPI1P60174 286 aa1.13□□□□□ -2.23
LSM6-205ENST00000507449 RAB14P61106 215 aa1.13□□□□□ -2.23
LSM6-205ENST00000507449 RELAQ04206 551 aa1.13□□□□□ -2.23
LSM6-205ENST00000507449 GLO1Q04760 184 aa1.13□□□□□ -2.23
LSM6-205ENST00000507449 ALKAL1Q6UXT8 129 aa1.13□□□□□ -2.23
LSM6-205ENST00000507449 OR2T4Q8NH00 348 aa1.13□□□□□ -2.23
LSM6-205ENST00000507449 AK3Q9UIJ7 227 aa1.13□□□□□ -2.23
LSM6-205ENST00000507449 NUP160Q12769 1436 aa1.13□□□□□ -2.23
LSM6-205ENST00000507449 C9orf84Q5VXU9 1444 aa1.13□□□□□ -2.23
LSM6-205ENST00000507449 H7C2G1 150 aa1.12□□□□□ -2.23
LSM6-205ENST00000507449 I3L521 148 aa1.12□□□□□ -2.23
LSM6-205ENST00000507449 LEPROTO15243 131 aa1.12□□□□□ -2.23
LSM6-205ENST00000507449 ACOX3O15254 700 aa1.12□□□□□ -2.23
LSM6-205ENST00000507449 FAM228BP0C875 321 aa1.12□□□□□ -2.23
LSM6-205ENST00000507449 MYL12AP19105 171 aa1.12□□□□□ -2.23
LSM6-205ENST00000507449 RAB5BP61020 215 aa1.12□□□□□ -2.23
LSM6-205ENST00000507449 TMEM258P61165 79 aa1.12□□□□□ -2.23
LSM6-205ENST00000507449 FABP9Q0Z7S8 132 aa1.12□□□□□ -2.23
LSM6-205ENST00000507449 TMEM155Q4W5P6 130 aa1.12□□□□□ -2.23
LSM6-205ENST00000507449 FAM201AQ5SY85 155 aa1.12□□□□□ -2.23
LSM6-205ENST00000507449 ZNF705AQ6ZN79 300 aaPredicted RBP1.12□□□□□ -2.23
LSM6-205ENST00000507449 COA5Q86WW8 74 aa1.12□□□□□ -2.23
LSM6-205ENST00000507449 DYNAPQ8N1N2 210 aa1.12□□□□□ -2.23
LSM6-205ENST00000507449 OR8B12Q8NGG6 310 aa1.12□□□□□ -2.23
LSM6-205ENST00000507449 ZNF563Q8TA94 476 aa1.12□□□□□ -2.23
LSM6-205ENST00000507449 HSPB9Q9BQS6 159 aa1.12□□□□□ -2.23
LSM6-205ENST00000507449 FKBP14Q9NWM8 211 aa1.12□□□□□ -2.23
LSM6-205ENST00000507449 NAT8Q9UHE5 227 aa1.12□□□□□ -2.23
LSM6-205ENST00000507449 DOCK10Q96BY6 2186 aa1.12□□□□□ -2.23
LSM6-205ENST00000507449 MDC1Q14676 2089 aaKnown RBP1.11□□□□□ -2.23
LSM6-205ENST00000507449 DISP1Q96F81 1524 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 SIPA1L1O43166 1804 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 TRAV38-1A0A0B4J264 116 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 A0A0D9SEW6 157 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 SIGLEC16A6NMB1 481 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 TRAPPC2LH3BP13 241 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 NIPSNAP2O75323 286 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 GPX1P07203 203 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 ZNF705DP0CH99 300 aaPredicted RBP1.11□□□□□ -2.23
LSM6-205ENST00000507449 ZNF705BP0CI00 300 aaPredicted RBP1.11□□□□□ -2.23
LSM6-205ENST00000507449 PSMB8P28062 276 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 EVX1P49640 407 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 RAB13P51153 203 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 AP2S1P53680 142 aaPredicted RBP1.11□□□□□ -2.23
LSM6-205ENST00000507449 AQP4P55087 323 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 AP1S1P61966 158 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 POLR2GP62487 172 aaKnown RBP eCLIP1.11□□□□□ -2.23
LSM6-205ENST00000507449 AKR1C1Q04828 323 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 BATFQ16520 125 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 KTN1-AS1Q86SY8 53 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 TMEM86BQ8N661 226 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 OR1M1Q8NGA1 313 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 OR51D1Q8NGF3 324 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 KLK6Q92876 244 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 OPTNQ96CV9 577 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 TMA16Q96EY4 203 aaKnown RBP1.11□□□□□ -2.23
LSM6-205ENST00000507449 PAQR5Q9NXK6 330 aaPredicted RBP1.11□□□□□ -2.23
LSM6-205ENST00000507449 ANGPT4Q9Y264 503 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 TIMM22Q9Y584 194 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 TIMM9Q9Y5J7 89 aa1.11□□□□□ -2.23
LSM6-205ENST00000507449 OTOGLQ3ZCN5 2332 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms