RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 MPTX1A8MV57 137 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 CCSO14618 274 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 PLXNB1O43157 2135 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 KBTBD11O94819 623 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 OR2A4O95047 310 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 AMY1AP04745 511 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 VDAC1P21796 283 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 HILS1P60008 231 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 C5orf64Q2M2E5 130 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 GGNBP1Q5YKI7 109 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 Q6ZRM9 215 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 H2BFWTQ7Z2G1 175 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 C5orf56Q8N8D9 126 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 TEX45Q8NA69 505 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 OR8H1Q8NGG4 311 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 RNASE11Q8TAA1 199 aaKnown RBP11.28□□□□□ -0.6
RNF4-208ENST00000507247 LSM10Q969L4 123 aaKnown RBP11.28□□□□□ -0.6
RNF4-208ENST00000507247 OR2A7Q96R45 310 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 BET1LQ9NYM9 111 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 KIAA1456Q9P272 454 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 SIGLEC9Q9Y336 463 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 MMP24Q9Y5R2 645 aa11.28□□□□□ -0.6
RNF4-208ENST00000507247 NSD1Q96L73 2696 aaPredicted RBP11.27□□□□□ -0.6
RNF4-208ENST00000507247 TNCP24821 2201 aa11.27□□□□□ -0.61
RNF4-208ENST00000507247 SH2D7A6NKC9 451 aaPredicted RBP11.27□□□□□ -0.61
RNF4-208ENST00000507247 UPK2O00526 184 aa11.27□□□□□ -0.61
RNF4-208ENST00000507247 SSNA1O43805 119 aa11.27□□□□□ -0.61
RNF4-208ENST00000507247 ATG12O94817 140 aa11.27□□□□□ -0.61
RNF4-208ENST00000507247 RELBQ01201 579 aa11.27□□□□□ -0.61
RNF4-208ENST00000507247 PJVKQ0ZLH3 352 aa11.27□□□□□ -0.61
RNF4-208ENST00000507247 C16orf82Q7Z2V1 217 aa11.27□□□□□ -0.61
RNF4-208ENST00000507247 PRIMA1Q86XR5 153 aa11.27□□□□□ -0.61
RNF4-208ENST00000507247 TMEM167AQ8TBQ9 72 aa11.27□□□□□ -0.61
RNF4-208ENST00000507247 RRNAD1Q96FB5 475 aaKnown RBP11.27□□□□□ -0.61
RNF4-208ENST00000507247 CLCC1Q96S66 551 aa11.27□□□□□ -0.61
RNF4-208ENST00000507247 AIFM2Q9BRQ8 373 aa11.27□□□□□ -0.61
RNF4-208ENST00000507247 C1RLQ9NZP8 487 aa11.27□□□□□ -0.61
RNF4-208ENST00000507247 NSG2Q9Y328 171 aa11.27□□□□□ -0.61
RNF4-208ENST00000507247 TMED3Q9Y3Q3 217 aa11.27□□□□□ -0.61
RNF4-208ENST00000507247 CLDN34H7C241 214 aa11.26□□□□□ -0.61
RNF4-208ENST00000507247 FCN1O00602 326 aa11.26□□□□□ -0.61
RNF4-208ENST00000507247 FGF16O43320 207 aa11.26□□□□□ -0.61
RNF4-208ENST00000507247 GPR137BO60478 399 aa11.26□□□□□ -0.61
RNF4-208ENST00000507247 MYOD1P15172 320 aa11.26□□□□□ -0.61
RNF4-208ENST00000507247 OR2B8PP59922 312 aa11.26□□□□□ -0.61
RNF4-208ENST00000507247 SSBP2P81877 361 aaPredicted RBP11.26□□□□□ -0.61
RNF4-208ENST00000507247 PLGLAQ15195 96 aa11.26□□□□□ -0.61
RNF4-208ENST00000507247 PPP1R27Q86WC6 154 aa11.26□□□□□ -0.61
RNF4-208ENST00000507247 FAM219AQ8IW50 185 aa11.26□□□□□ -0.61
RNF4-208ENST00000507247 CADM3Q8N126 398 aa11.26□□□□□ -0.61
RNF4-208ENST00000507247 OR4A5Q8NH83 315 aa11.26□□□□□ -0.61
RNF4-208ENST00000507247 VSTM2AQ8TAG5 236 aa11.26□□□□□ -0.61
RNF4-208ENST00000507247 OR10C1Q96KK4 312 aa11.26□□□□□ -0.61
RNF4-208ENST00000507247 RANBP3Q9H6Z4 567 aaPredicted RBP11.26□□□□□ -0.61
RNF4-208ENST00000507247 ZNF430Q9H8G1 570 aaPredicted RBP11.26□□□□□ -0.61
RNF4-208ENST00000507247 RAB18Q9NP72 206 aa11.26□□□□□ -0.61
RNF4-208ENST00000507247 CACNG5Q9UF02 275 aa11.26□□□□□ -0.61
RNF4-208ENST00000507247 hCG_2014768A0A024R1R8 64 aa11.25□□□□□ -0.61
RNF4-208ENST00000507247 PIGBOS1A0A0B4J2F0 54 aa11.25□□□□□ -0.61
RNF4-208ENST00000507247 GOSR2O14653 212 aa11.25□□□□□ -0.61
RNF4-208ENST00000507247 SIX6O95475 246 aa11.25□□□□□ -0.61
RNF4-208ENST00000507247 UBA52P62987 128 aaKnown RBP11.25□□□□□ -0.61
RNF4-208ENST00000507247 FCN2Q15485 313 aa11.25□□□□□ -0.61
RNF4-208ENST00000507247 PRSS8Q16651 343 aa11.25□□□□□ -0.61
RNF4-208ENST00000507247 RASL11BQ9BPW5 248 aa11.25□□□□□ -0.61
RNF4-208ENST00000507247 HSPB9Q9BQS6 159 aa11.25□□□□□ -0.61
RNF4-208ENST00000507247 MED28Q9H204 178 aa11.25□□□□□ -0.61
RNF4-208ENST00000507247 C15orf61A6NNL5 157 aa11.24□□□□□ -0.61
RNF4-208ENST00000507247 CA2P00918 260 aa11.24□□□□□ -0.61
RNF4-208ENST00000507247 IFNA21P01568 189 aa11.24□□□□□ -0.61
RNF4-208ENST00000507247 HLA-DRB1P01911 266 aa11.24□□□□□ -0.61
RNF4-208ENST00000507247 RNASE1P07998 156 aaKnown RBP11.24□□□□□ -0.61
RNF4-208ENST00000507247 SULT1A3P0DMM9 295 aa11.24□□□□□ -0.61
RNF4-208ENST00000507247 SULT1A4P0DMN0 295 aa11.24□□□□□ -0.61
RNF4-208ENST00000507247 HLA-GP17693 338 aa11.24□□□□□ -0.61
RNF4-208ENST00000507247 RRAS2P62070 204 aaPredicted RBP11.24□□□□□ -0.61
RNF4-208ENST00000507247 BLCAPP62952 87 aa11.24□□□□□ -0.61
RNF4-208ENST00000507247 TNXAQ16473 311 aa11.24□□□□□ -0.61
RNF4-208ENST00000507247 C10orf55Q5SWW7 151 aa11.24□□□□□ -0.61
RNF4-208ENST00000507247 Q6ZS46 218 aa11.24□□□□□ -0.61
RNF4-208ENST00000507247 MMD2Q8IY49 270 aa11.24□□□□□ -0.61
RNF4-208ENST00000507247 OR11H7Q8NGC8 314 aa11.24□□□□□ -0.61
RNF4-208ENST00000507247 OR5M8Q8NGP6 311 aa11.24□□□□□ -0.61
RNF4-208ENST00000507247 QTRT1Q9BXR0 403 aaKnown RBP11.24□□□□□ -0.61
RNF4-208ENST00000507247 MGAT4CQ9UBM8 478 aa11.24□□□□□ -0.61
RNF4-208ENST00000507247 MXRA5Q9NR99 2828 aa11.23□□□□□ -0.61
RNF4-208ENST00000507247 IGHV7-81A0A0B4J1V7 117 aa11.23□□□□□ -0.61
RNF4-208ENST00000507247 A0A1B0GU03 582 aa11.23□□□□□ -0.61
RNF4-208ENST00000507247 C13orf42A0A1B0GVH6 325 aa11.23□□□□□ -0.61
RNF4-208ENST00000507247 FAM25EA8MYX2 175 aa11.23□□□□□ -0.61
RNF4-208ENST00000507247 E7EUB6 86 aa11.23□□□□□ -0.61
RNF4-208ENST00000507247 M0QZK8 103 aa11.23□□□□□ -0.61
RNF4-208ENST00000507247 TCF21O43680 179 aa11.23□□□□□ -0.61
RNF4-208ENST00000507247 PITX3O75364 302 aa11.23□□□□□ -0.61
RNF4-208ENST00000507247 SNAPC5O75971 98 aa11.23□□□□□ -0.61
RNF4-208ENST00000507247 NXPH3O95157 252 aa11.23□□□□□ -0.61
RNF4-208ENST00000507247 SLC25A6P12236 298 aa11.23□□□□□ -0.61
RNF4-208ENST00000507247 CXCL3P19876 107 aa11.23□□□□□ -0.61
RNF4-208ENST00000507247 RPL8P62917 257 aaKnown RBP11.23□□□□□ -0.61
RNF4-208ENST00000507247 NDPQ00604 133 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms